Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold195G40840 Striga asiatica HOM05D001057 ORTHO05D002028 1.6e-100 369.4 184 100.0
SGA_v2.0_scaffold108G30907 Striga asiatica HOM05D001057 ORTHO05D002028 4.9e-41 171.8 185 51.9
SalBow3G2037 Salvia bowleyana HOM05D001057 ORTHO05D002028 1.3e-33 147.1 161 52.2
SalBow3G4294 Salvia bowleyana HOM05D001057 ORTHO05D002028 1.3e-33 147.1 161 52.2
Migut.H02308 Erythranthe guttata HOM05D001057 ORTHO05D002028 2.2e-33 146.4 164 51.8
MSTRG.2594 Avicennia marina HOM05D001057 ORTHO05D002028 2.0e-26 123.2 161 46.6
Oeu053586.1 Olea europaea HOM05D001057 ORTHO05D002028 2.2e-17 93.2 162 40.1
SalBow5G0921 Salvia bowleyana HOM05D001057 ORTHO05D002028 3.8e-17 92.4 130 41.5
SalBow5G5321 Salvia bowleyana HOM05D001057 ORTHO05D002028 3.8e-17 92.4 130 41.5
Atru.chr3.1294 Acer truncatum HOM05D001057 ORTHO05D002028 3.2e-16 89.4 101 49.5
Actinidia25318 Actinidia chinensis HOM05D001057 ORTHO05D002028 5.5e-16 88.6 116 45.7
CiPaw.02G021300 Carya illinoinensis HOM05D001057 ORTHO05D002028 2.7e-15 86.3 138 41.3
MSTRG.3744 Avicennia marina HOM05D001057 ORTHO05D002028 1.8e-14 83.6 110 45.5
Dinv13622 Davidia involucrata HOM05D001057 ORTHO05D002028 8.8e-14 81.3 107 45.8
Cc07_g14280 Coffea canephora HOM05D001057 ORTHO05D002028 3.3e-13 79.3 194 36.6
TAR381G1324 Trochodendron aralioides HOM05D001057 ORTHO05D002028 9.7e-13 77.8 161 36.6
MD15G1315100 Malus domestica HOM05D001057 ORTHO05D002028 1.3e-12 77.4 128 39.8
Manes.12G127700 Manihot esculenta HOM05D001057 ORTHO05D002028 1.3e-12 77.4 162 37.0
Prupe.6G196600 Prunus persica HOM05D001057 ORTHO05D002028 1.7e-12 77.0 145 37.9
Sc16g0000460 Simmondsia chinensis HOM05D001057 ORTHO05D002028 2.2e-12 76.6 173 34.7
Lj2g0001193 Lotus japonicus HOM05D001057 ORTHO05D002028 3.7e-12 75.9 106 42.5
Ciclev10026488m.g Citrus clementina HOM05D001057 ORTHO05D002028 1.4e-11 73.9 102 45.1
Thecc.01G092300 Theobroma cacao HOM05D001057 ORTHO05D002028 1.8e-11 73.6 163 35.0
TAR381G1737 Trochodendron aralioides HOM05D001057 ORTHO05D002028 1.8e-11 73.6 102 40.2
GSVIVG01003604001 Vitis vinifera HOM05D001057 ORTHO05D002028 1.8e-11 73.6 108 36.1
Haze_15054 Corylus avellana HOM05D001057 ORTHO05D002028 2.4e-11 73.2 136 36.8
Cfa004354 Carpinus fangiana HOM05D001057 ORTHO05D002028 3.1e-11 72.8 155 32.3
GSVIVG01003601001 Vitis vinifera HOM05D001057 ORTHO05D002028 3.1e-11 72.8 109 36.7
arahy.Tifrunner.gnm1.ann1.16X2PZ Arachis hypogaea HOM05D001057 ORTHO05D002028 5.3e-11 72.0 145 34.5
arahy.Tifrunner.gnm1.ann1.246C9P Arachis hypogaea HOM05D001057 ORTHO05D002028 5.3e-11 72.0 145 34.5
Ca_04539_v3 Cicer arietinum L. HOM05D001057 ORTHO05D002028 9.1e-11 71.2 107 42.1
Rhsim08G0014900 Rhododendron simsii HOM05D001057 ORTHO05D002028 1.2e-10 70.9 162 33.3
TWI77G0595 Tripterygium wilfordii HOM05D001057 ORTHO05D002028 1.2e-10 70.9 106 42.5
Nn5g29931 Nelumbo nucifera HOM05D001057 ORTHO05D002028 2.0e-10 70.1 112 38.4
Manes.13G099300 Manihot esculenta HOM05D001057 ORTHO05D002028 2.6e-10 69.7 164 37.2
FAN26G0905 Fragaria x ananassa HOM05D001057 ORTHO05D002028 4.5e-10 68.9 124 39.5
Psat2g082560 Pisum sativum HOM05D001057 ORTHO05D002028 4.5e-10 68.9 105 38.1
Lalb_Chr16g0381771 Lupinus albus HOM05D001057 ORTHO05D002028 5.9e-10 68.6 103 38.8
PGR031G1933 Punica granatum HOM05D001057 ORTHO05D002028 5.9e-10 68.6 117 37.6
Aqoxy6G01460 Aquilegia oxysepala HOM05D001057 ORTHO05D002028 7.7e-10 68.2 153 32.7
Gorai.011G110000 Gossypium raimondii HOM05D001057 ORTHO05D002028 7.7e-10 68.2 120 38.3
Nitab4.5_0001468g0020 Nicotiana tabacum HOM05D001057 ORTHO05D002028 1.0e-09 67.8 123 37.4
Gohir.D10G100300 Gossypium hirsutum HOM05D001057 ORTHO05D002028 1.7e-09 67.0 165 32.7
TWI74G1478 Tripterygium wilfordii HOM05D001057 ORTHO05D002028 1.7e-09 67.0 122 36.9
FAN23G1800 Fragaria x ananassa HOM05D001057 ORTHO05D002028 2.9e-09 66.2 124 38.7
vmacro18568 Vaccinium macrocarpon HOM05D001057 ORTHO05D002028 2.9e-09 66.2 130 37.7
FvH4_1g19890 Fragaria vesca HOM05D001057 ORTHO05D002028 3.8e-09 65.9 125 38.4
FAN19G0601 Fragaria x ananassa HOM05D001057 ORTHO05D002028 3.8e-09 65.9 125 38.4
Glyma.01G024600 Glycine max HOM05D001057 ORTHO05D002028 5.0e-09 65.5 107 43.0
Gohir.A10G087800 Gossypium hirsutum HOM05D001057 ORTHO05D002028 5.0e-09 65.5 120 37.5
Hund14094 Selenicereus undatus HOM05D001057 ORTHO05D002028 6.5e-09 65.1 160 30.6
COL.COLO4_27341 Corchorus olitorius HOM05D001057 ORTHO05D002028 1.1e-08 64.3 123 39.0
PSO541G5139 Papaver somniferum HOM05D001057 ORTHO05D002028 1.1e-08 64.3 114 35.1
QL06p047483 Quercus lobata HOM05D001057 ORTHO05D002028 1.1e-08 64.3 174 32.8
RcHm_v2.0_Chr2g0111711 Rosa chinensis HOM05D001057 ORTHO05D002028 1.1e-08 64.3 115 39.1
PSO675G4570 Papaver somniferum HOM05D001057 ORTHO05D002028 1.5e-08 63.9 48 60.4
TPR.G29986 Trifolium pratense HOM05D001057 ORTHO05D002028 1.9e-08 63.5 108 37.0
TAR628G0572 Trochodendron aralioides HOM05D001057 ORTHO05D002028 1.9e-08 63.5 106 34.0
Nn1g05516 Nelumbo nucifera HOM05D001057 ORTHO05D002028 4.2e-08 62.4 111 37.8
Duzib147G1651 Durio zibethinus HOM05D001057 ORTHO05D002028 5.5e-08 62.0 46 60.9
FAN28G0355 Fragaria x ananassa HOM05D001057 ORTHO05D002028 5.5e-08 62.0 150 34.7
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 9.4e-08 61.2 66 51.5
Aa31LG6G15070 Aethionema arabicum HOM05D001057 ORTHO05D002028 2.1e-07 60.1 109 34.9
CSS0036629 Camellia sinensis var. sinensis HOM05D001057 ORTHO05D002028 2.7e-07 59.7 37 73.0
CAN.G1388.9 Capsicum annuum HOM05D001057 ORTHO05D002028 2.7e-07 59.7 49 55.1
Eucgr.I00554 Eucalyptus grandis HOM05D001057 ORTHO05D002028 2.7e-07 59.7 142 31.7
Nitab4.5_0010196g0010 Nicotiana tabacum HOM05D001057 ORTHO05D002028 2.7e-07 59.7 49 55.1
Phvul.002G148500 Phaseolus vulgaris HOM05D001057 ORTHO05D002028 2.7e-07 59.7 110 36.4
Sabra05G0117800 Salix brachista HOM05D001057 ORTHO05D002028 2.7e-07 59.7 130 33.1
CANSAT01G2882 Cannabis sativa HOM05D001057 ORTHO05D002028 3.6e-07 59.3 107 39.3
Medtr5g032440 Medicago truncatula HOM05D001057 ORTHO05D002028 6.1e-07 58.5 104 33.7
Peaxi162Scf00447g00215 Petunia axillaris HOM05D001057 ORTHO05D002028 6.1e-07 58.5 173 29.5
THA.LOC104804169 Tarenaya hassleriana HOM05D001057 ORTHO05D002028 6.1e-07 58.5 107 38.3
Lsat_1_v5_gn_0_22321 Lactuca sativa HOM05D001057 ORTHO05D002028 8.0e-07 58.2 139 28.8
VMungo1215G2805 Vigna mungo HOM05D001057 ORTHO05D002028 8.0e-07 58.2 107 35.5
Glyma.02G040600 Glycine max HOM05D001057 ORTHO05D002028 1.0e-06 57.8 84 44.0
Gorai.003G042900 Gossypium raimondii HOM05D001057 ORTHO05D002028 1.0e-06 57.8 86 41.9
Cpa.g.sc55.37 Carica papaya HOM05D001057 ORTHO05D002028 2.3e-06 56.6 106 37.7
AUR62003287 Chenopodium quinoa HOM05D001057 ORTHO05D002028 6.7e-06 55.1 114 33.3
Solyc11g010480.2 Solanum lycopersicum HOM05D001057 ORTHO05D002028 8.8e-06 54.7 50 48.0
Sopen11g005260 Solanum pennellii HOM05D001057 ORTHO05D002028 8.8e-06 54.7 50 48.0


User provided reference genes

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