Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.4e-59 232.6 113 100.0
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.1e-46 189.9 115 82.6
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 4.1e-46 188.0 115 80.0
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 7.7e-45 183.7 113 79.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.7e-44 182.6 117 79.5
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 3.8e-44 181.4 114 79.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 5.0e-44 181.0 113 78.8
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 6.5e-44 180.6 117 78.6
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 1.1e-43 179.9 114 77.2
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 4.2e-43 177.9 114 78.9
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 7.2e-43 177.2 115 76.5
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 7.2e-43 177.2 115 77.4
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 9.4e-43 176.8 103 84.5
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 9.4e-43 176.8 113 77.9
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.6e-42 176.0 106 77.4
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.6e-42 176.0 98 84.7
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 77.0
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.6e-42 174.9 122 73.0
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.6e-42 174.9 122 73.0
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 4.7e-42 174.5 101 83.2
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 6.1e-42 174.1 113 77.0
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 8.0e-42 173.7 96 84.4
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 8.0e-42 173.7 113 76.1
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 1.4e-41 172.9 116 75.9
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.4e-41 172.9 115 76.5
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.4e-41 172.9 115 76.5
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.8e-41 172.6 117 78.6
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 1.8e-41 172.6 113 76.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.3e-41 172.2 116 75.0
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.3e-41 172.2 113 74.3
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 3.0e-41 171.8 114 76.3
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 5.2e-41 171.0 114 76.3
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 6.8e-41 170.6 101 78.2
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 6.8e-41 170.6 114 75.4
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 6.8e-41 170.6 114 75.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 8.8e-41 170.2 115 75.7
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 8.8e-41 170.2 111 73.9
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.2e-40 169.9 115 73.0
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.5e-40 169.5 113 73.5
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.0e-40 169.1 113 74.3
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.0e-40 169.1 113 74.3
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.0e-40 169.1 113 74.3
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.0e-40 169.1 113 74.3
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 2.6e-40 168.7 98 80.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 2.6e-40 168.7 96 85.4
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 2.6e-40 168.7 114 74.6
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 3.4e-40 168.3 116 77.6
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 3.4e-40 168.3 113 73.5
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 3.4e-40 168.3 106 77.4
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 4.4e-40 167.9 113 73.5
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 7.5e-40 167.2 115 75.7
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 2.2e-39 165.6 114 72.8
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 3.7e-39 164.9 113 74.3
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 4.8e-39 164.5 110 74.5
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 6.3e-39 164.1 113 72.6
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 8.3e-39 163.7 113 72.6
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 8.3e-39 163.7 106 74.5
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.1e-38 163.3 109 72.5
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.4e-38 162.9 114 77.2
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.4e-38 162.9 113 73.5
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 5.4e-38 161.0 97 78.4
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.1e-38 160.2 96 81.2
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.2e-37 159.8 118 70.3
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.2e-37 159.8 117 67.5
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.7e-37 158.7 119 69.7
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.7e-37 158.7 115 67.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.7e-37 158.7 115 67.0
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 2.7e-37 158.7 98 81.6
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 3.5e-37 158.3 97 76.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 3.5e-37 158.3 98 76.5
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 3.5e-37 158.3 97 76.3
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 7.7e-37 157.1 103 73.8
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 7.7e-37 157.1 103 73.8
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 7.7e-37 157.1 103 73.8
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 7.7e-37 157.1 103 73.8
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 7.7e-37 157.1 113 70.8
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 1.0e-36 156.8 110 70.9
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 1.7e-36 156.0 103 72.8
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.7e-36 156.0 120 65.8
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.9e-36 155.2 95 78.9
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 3.8e-36 154.8 109 69.7
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 3.8e-36 154.8 126 65.9
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.5e-35 152.1 129 65.1
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 5.5e-35 151.0 82 86.6
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.1e-34 149.1 125 63.2
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 1.4e-33 146.4 81 86.4
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 3.7e-31 138.3 96 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 7.8e-29 130.6 94 59.6
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 7.8e-29 130.6 104 67.3
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 7.3e-27 124.0 99 57.6
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.2e-26 123.2 93 53.8
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 2.8e-26 122.1 99 64.6
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 1.0e-25 120.2 96 63.5
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 4.4e-24 114.8 101 54.5
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.2e-23 112.5 92 58.7
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.8e-22 109.4 64 82.8
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 7.0e-22 107.5 60 85.0
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 7.5e-16 87.4 77 48.1
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 5.6e-11 71.2 92 34.8
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.7e-07 58.5 51 52.9


User provided reference genes

Program Settings