Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 9.5e-55 216.5 100 100.0
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 6.9e-21 104.0 79 60.8
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 9.0e-21 103.6 86 58.1
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.2e-18 94.7 83 57.8
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 7.1e-18 94.0 79 60.8
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 4.6e-17 91.3 79 58.2
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 6.0e-17 90.9 101 55.4
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 7.9e-17 90.5 89 52.8
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 1.8e-16 89.4 76 60.5
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 3.9e-16 88.2 89 49.4
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 8.7e-16 87.0 98 49.0
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 8.7e-16 87.0 98 49.0
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 1.5e-15 86.3 84 52.4
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 2.5e-15 85.5 78 55.1
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 3.3e-15 85.1 81 50.6
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 4.3e-15 84.7 77 57.1
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 7.4e-15 84.0 84 51.2
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 2.1e-14 82.4 84 51.2
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 2.1e-14 82.4 83 51.8
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 6.2e-14 80.9 93 52.7
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 8.1e-14 80.5 82 54.9
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.8e-13 79.3 86 53.5
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 1.8e-13 79.3 84 47.6
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 2.4e-13 79.0 83 53.0
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 2.4e-13 79.0 78 52.6
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 2.4e-13 79.0 80 51.2
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 1.7e-11 72.8 76 51.3
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 1.7e-11 72.8 99 45.5
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 2.9e-11 72.0 88 45.5
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 4.9e-11 71.2 71 52.1
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 6.5e-11 70.9 98 44.9
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.1e-10 70.1 54 57.4
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 1.4e-10 69.7 88 47.7
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 2.5e-10 68.9 78 48.7
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 4.2e-10 68.2 82 42.7
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 4.2e-10 68.2 82 42.7
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.3e-10 67.0 50 70.0
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 2.1e-09 65.9 88 44.3
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 2.1e-09 65.9 99 42.4
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.7e-09 65.5 101 42.6
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 6.0e-09 64.3 54 59.3
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 7.9e-09 63.9 54 59.3
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 7.9e-09 63.9 54 59.3
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 7.9e-09 63.9 54 59.3
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 7.9e-09 63.9 88 48.9
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 1.3e-08 63.2 87 43.7
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 2.3e-08 62.4 93 45.2
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 3.0e-08 62.0 83 44.6
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 3.0e-08 62.0 56 57.1
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 5.1e-08 61.2 46 63.0
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 5.1e-08 61.2 63 54.0
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 6.7e-08 60.8 87 42.5
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 1.5e-07 59.7 106 39.6
SalBow5G3820 Salvia bowleyana HOM05D006872 ORTHO05D006261 4.3e-07 58.2 76 43.4
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 9.6e-07 57.0 50 54.0
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 9.6e-07 57.0 47 57.4
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 1.3e-06 56.6 44 59.1
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.3e-06 56.6 74 44.6
PSO339G3041 Papaver somniferum HOM05D006872 ORTHO05D006261 1.3e-06 56.6 86 43.0
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.6e-06 56.2 102 37.3
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 1.6e-06 56.2 81 42.0
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 1.6e-06 56.2 57 47.4
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 2.1e-06 55.8 88 44.3
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 2.8e-06 55.5 82 41.5
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.8e-06 55.5 102 37.3
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 2.8e-06 55.5 56 51.8
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 3.7e-06 55.1 84 45.2
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 3.7e-06 55.1 52 55.8
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.7e-06 55.1 82 39.0
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 3.7e-06 55.1 84 41.7
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 4.8e-06 54.7 102 36.3
PSO384G3916 Papaver somniferum HOM05D006872 ORTHO05D006261 4.8e-06 54.7 73 43.8
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 4.8e-06 54.7 57 45.6
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 6.2e-06 54.3 58 44.8
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.2e-06 53.9 76 39.5
HanXRQChr13g0398221 Helianthus annuus HOM05D006872 ORTHO05D006261 8.2e-06 53.9 83 36.1


User provided reference genes

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