Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 1.7e-107 392.9 236 100.0
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 1.2e-23 114.4 75 76.0
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 4.0e-19 99.4 73 64.4
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 5.2e-19 99.0 73 63.0
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.5e-18 97.4 71 63.4
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 1.5e-18 97.4 73 63.0
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 5.8e-18 95.5 73 60.3
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 9.8e-18 94.7 73 63.0
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 1.3e-17 94.4 73 60.3
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 1.7e-17 94.0 73 58.9
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 3.7e-17 92.8 73 60.3
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 8.3e-17 91.7 73 56.2
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.4e-16 90.9 71 62.0
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.4e-16 90.9 71 62.0
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 3.2e-16 89.7 71 57.7
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 4.1e-16 89.4 73 58.9
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 7.1e-16 88.6 71 57.7
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 9.2e-16 88.2 73 56.2
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 9.2e-16 88.2 71 54.9
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.6e-15 87.4 73 50.7
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 2.7e-15 86.7 71 53.5
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 2.7e-15 86.7 71 56.3
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 6.0e-15 85.5 73 53.4
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 7.8e-15 85.1 73 49.3
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 1.3e-14 84.3 71 57.7
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 1.7e-14 84.0 73 52.1
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 2.3e-14 83.6 73 52.1
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 3.9e-14 82.8 73 53.4
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 5.1e-14 82.4 73 50.7
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 6.6e-14 82.0 73 50.7
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 1.5e-13 80.9 73 49.3
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 2.5e-13 80.1 73 47.9
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 2.5e-13 80.1 73 50.7
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 2.5e-13 80.1 73 49.3
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 3.3e-13 79.7 73 52.1
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 4.3e-13 79.3 73 49.3
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 5.6e-13 79.0 73 50.7
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 5.6e-13 79.0 73 49.3
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 7.3e-13 78.6 73 50.7
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 1.2e-12 77.8 73 49.3
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 1.6e-12 77.4 71 50.7
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 1.6e-12 77.4 73 49.3
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 1.6e-12 77.4 73 49.3
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 2.1e-12 77.0 73 46.6
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 2.8e-12 76.6 73 49.3
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 2.8e-12 76.6 73 47.9
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 2.8e-12 76.6 73 46.6
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 3.6e-12 76.3 73 47.9
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 3.6e-12 76.3 73 47.9
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 3.6e-12 76.3 121 34.7
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 4.7e-12 75.9 73 47.9
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 6.2e-12 75.5 73 46.6
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 6.2e-12 75.5 73 47.9
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 6.2e-12 75.5 73 46.6
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 6.2e-12 75.5 73 49.3
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 8.1e-12 75.1 73 49.3
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 8.1e-12 75.1 73 52.1
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 1.1e-11 74.7 73 45.2
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 1.1e-11 74.7 73 45.2
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 1.1e-11 74.7 73 45.2
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 1.1e-11 74.7 73 46.6
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 1.1e-11 74.7 73 45.2
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 1.1e-11 74.7 73 45.2
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.4e-11 74.3 73 43.8
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 1.4e-11 74.3 73 47.9
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.8e-11 73.9 73 42.5
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.8e-11 73.9 73 42.5
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.8e-11 73.9 73 42.5
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 1.8e-11 73.9 73 49.3
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 1.8e-11 73.9 73 49.3
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 2.3e-11 73.6 73 47.9
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 3.1e-11 73.2 73 49.3
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 3.1e-11 73.2 73 49.3
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 4.0e-11 72.8 73 45.2
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 4.0e-11 72.8 73 46.6
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 5.2e-11 72.4 73 49.3
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 6.8e-11 72.0 72 48.6
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 6.8e-11 72.0 72 48.6
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 8.9e-11 71.6 73 49.3
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 1.5e-10 70.9 73 47.9
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 1.5e-10 70.9 73 47.9
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 2.6e-10 70.1 73 47.9
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 2.6e-10 70.1 73 43.8
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 4.4e-10 69.3 73 46.6
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 4.4e-10 69.3 73 45.2
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 7.6e-10 68.6 73 45.2
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 7.6e-10 68.6 73 45.2
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 7.6e-10 68.6 73 43.8
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 9.9e-10 68.2 71 43.7
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 1.7e-09 67.4 73 45.2
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 1.7e-09 67.4 73 43.8
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 1.7e-09 67.4 74 43.2
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 2.2e-09 67.0 73 42.5
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 2.2e-09 67.0 73 42.5
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 2.9e-09 66.6 73 42.5
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 2.9e-09 66.6 73 46.6
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 3.7e-09 66.2 91 38.5
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 4.9e-09 65.9 73 45.2
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 4.9e-09 65.9 73 45.2
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 1.1e-08 64.7 73 41.1
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 1.1e-08 64.7 73 41.1
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-08 64.7 73 41.1
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-08 64.7 73 41.1
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-08 64.7 73 41.1
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 1.1e-08 64.7 73 41.1
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 1.9e-08 63.9 73 43.8
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 5.4e-08 62.4 73 39.7
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 9.2e-08 61.6 73 43.8
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 9.2e-08 61.6 73 38.4
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 1.6e-07 60.8 73 42.5
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 2.7e-07 60.1 73 39.7
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 2.7e-07 60.1 73 41.1
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 4.6e-07 59.3 73 41.1
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 1.0e-06 58.2 73 39.7
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 3.0e-06 56.6 61 47.5


User provided reference genes

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