Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold194G40743 Striga asiatica HOM05D002138 ORTHO05D002106 4.5e-52 207.6 103 100.0
SGA_v2.0_scaffold69G23248 Striga asiatica HOM05D002138 ORTHO05D002106 5.4e-13 77.8 46 87.0
MSTRG.6246 Avicennia marina HOM05D002138 ORTHO05D002106 1.3e-09 66.6 46 76.1
Oeu009081.3 Olea europaea HOM05D002138 ORTHO05D002106 2.1e-09 65.9 46 76.1
Migut.J01511 Erythranthe guttata HOM05D002138 ORTHO05D002106 1.1e-08 63.5 46 73.9
unitig_60.g25492 Utricularia gibba HOM05D002138 ORTHO05D002106 3.1e-08 62.0 46 65.2
CSS0019083 Camellia sinensis var. sinensis HOM05D002138 ORTHO05D002106 2.6e-07 58.9 46 65.2
MD05G1263500 Malus domestica HOM05D002138 ORTHO05D002106 5.8e-07 57.8 46 63.0
Atru.chr10.656 Acer truncatum HOM05D002330 ORTHO05D002411 7.6e-07 57.4 46 67.4
Psat7g060840 Pisum sativum HOM05D002138 ORTHO05D002106 7.6e-07 57.4 46 60.9
Glyma.08G129400 Glycine max HOM05D002138 ORTHO05D002106 9.9e-07 57.0 46 60.9
Phvul.002G252000 Phaseolus vulgaris HOM05D002138 ORTHO05D002106 9.9e-07 57.0 46 60.9
VMungo0251G0598 Vigna mungo HOM05D002138 ORTHO05D002106 9.9e-07 57.0 46 60.9
CANSAT35G1191 Cannabis sativa HOM05D002138 ORTHO05D002106 2.9e-06 55.5 46 65.2
Glyma.U031408 Glycine max HOM05D002138 ORTHO05D002106 3.8e-06 55.1 46 58.7
Lalb_Chr12g0204321 Lupinus albus HOM05D002138 ORTHO05D002106 3.8e-06 55.1 45 62.2
CARHR227210 Cardamine hirsuta HOM05D002138 ORTHO05D002106 4.9e-06 54.7 46 58.7
Ca_17809_v3 Cicer arietinum L. HOM05D002138 ORTHO05D002106 4.9e-06 54.7 46 60.9
Cc06_g12860 Coffea canephora HOM05D002138 ORTHO05D002106 4.9e-06 54.7 46 65.2
Potri.001G442400 Populus trichocarpa HOM05D002138 ORTHO05D002106 4.9e-06 54.7 46 63.0
TWI63G1074 Tripterygium wilfordii HOM05D002138 ORTHO05D002106 6.4e-06 54.3 46 56.5


User provided reference genes

Program Settings