Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold194G40733 Striga asiatica HOM05D002678 ORTHO05D002920 9.3e-77 290.0 138 100.0
Sed0001325 Sechium edule HOM05D002678 ORTHO05D002920 2.0e-10 69.7 75 48.0
C03p01120 Brassica napus HOM05D002678 ORTHO05D002920 3.4e-10 68.9 79 50.6
BolC3t12671H Brassica oleracea HOM05D002678 ORTHO05D002920 3.4e-10 68.9 79 50.6
SalBow3G2888 Salvia bowleyana HOM05D002678 ORTHO05D002920 4.4e-10 68.6 83 48.2
AL6G11940 Arabidopsis lyrata HOM05D002678 ORTHO05D002920 5.8e-10 68.2 82 46.3
BcaNung03282 Brassica carinata HOM05D002678 ORTHO05D002920 7.5e-10 67.8 55 60.0
A10p33010 Brassica napus HOM05D002678 ORTHO05D002920 7.5e-10 67.8 55 60.0
C09p73980 Brassica napus HOM05D002678 ORTHO05D002920 7.5e-10 67.8 55 60.0
BraA10t45338Z Brassica rapa HOM05D002678 ORTHO05D002920 7.5e-10 67.8 55 60.0
Phvul.001G172100 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 7.5e-10 67.8 72 48.6
TAR623G1692 Trochodendron aralioides HOM05D002678 ORTHO05D002920 9.8e-10 67.4 86 43.0
Psat6g069440 Pisum sativum HOM05D002678 ORTHO05D002920 1.3e-09 67.0 66 50.0
Nn2g12832 Nelumbo nucifera HOM05D002678 ORTHO05D002920 1.7e-09 66.6 76 47.4
Sp6g39880 Schrenkiella parvula HOM05D002678 ORTHO05D002920 1.7e-09 66.6 83 47.0
Carub.0006s0146 Capsella rubella HOM05D002678 ORTHO05D002920 2.2e-09 66.2 85 44.7
BolC9t60133H Brassica oleracea HOM05D002678 ORTHO05D002920 2.9e-09 65.9 86 45.3
Medtr1g067350 Medicago truncatula HOM05D002678 ORTHO05D002920 2.9e-09 65.9 85 45.9
Atru.chr8.2500 Acer truncatum HOM05D002678 ORTHO05D002920 3.7e-09 65.5 68 50.0
BcaB01g06197 Brassica carinata HOM05D002678 ORTHO05D002920 3.7e-09 65.5 55 60.0
Ca_11435_v3 Cicer arietinum L. HOM05D002678 ORTHO05D002920 4.9e-09 65.1 86 43.0
Thhalv10014890m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 4.9e-09 65.1 54 59.3
Glyma.19G175800 Glycine max HOM05D002678 ORTHO05D002920 4.9e-09 65.1 85 44.7
VMungo1383G3255 Vigna mungo HOM05D002678 ORTHO05D002920 4.9e-09 65.1 72 48.6
AT5G02640 Arabidopsis thaliana HOM05D002678 ORTHO05D002920 6.4e-09 64.7 81 46.9
CARHR210710 Cardamine hirsuta HOM05D002678 ORTHO05D002920 6.4e-09 64.7 79 48.1
Glyma.03G175100 Glycine max HOM05D002678 ORTHO05D002920 6.4e-09 64.7 78 46.2
Lj1C177T9 Lonicera japonica HOM05D002678 ORTHO05D002920 6.4e-09 64.7 84 40.5
Oeu035168.1 Olea europaea HOM05D002678 ORTHO05D002920 6.4e-09 64.7 85 48.2
A03p00870 Brassica napus HOM05D002678 ORTHO05D002920 1.1e-08 63.9 54 57.4
Ciclev10012982m.g Citrus clementina HOM05D002678 ORTHO05D002920 1.1e-08 63.9 64 51.6
Dinv06291 Davidia involucrata HOM05D002678 ORTHO05D002920 1.1e-08 63.9 70 50.0
Aqoxy2G01947 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 1.4e-08 63.5 89 39.3
MBI05_g32634_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 1.9e-08 63.2 64 48.4
QL07p046064 Quercus lobata HOM05D002678 ORTHO05D002920 1.9e-08 63.2 86 44.2
Rhsim13G0088900 Rhododendron simsii HOM05D002678 ORTHO05D002920 1.9e-08 63.2 96 38.5
THA.LOC104826999 Tarenaya hassleriana HOM05D002678 ORTHO05D002920 1.9e-08 63.2 54 57.4
BcaC06g32005 Brassica carinata HOM05D002678 ORTHO05D002920 2.4e-08 62.8 82 45.1
Manes.08G073300 Manihot esculenta HOM05D002678 ORTHO05D002920 2.4e-08 62.8 82 45.1
Oeu058517.1 Olea europaea HOM05D002678 ORTHO05D002920 2.4e-08 62.8 88 46.6
Peaxi162Scf00411g00813 Petunia axillaris HOM05D002678 ORTHO05D002920 2.4e-08 62.8 83 48.2
Prupe.6G246400 Prunus persica HOM05D002678 ORTHO05D002920 2.4e-08 62.8 107 36.4
Sabra16G0089400 Salix brachista HOM05D002678 ORTHO05D002920 2.4e-08 62.8 85 43.5
Sopen06g031980 Solanum pennellii HOM05D002678 ORTHO05D002920 2.4e-08 62.8 56 57.1
TWI53G1006 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 2.4e-08 62.8 77 45.5
TWI74G0388 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 2.4e-08 62.8 79 45.6
Nn2g10547 Nelumbo nucifera HOM05D002678 ORTHO05D002920 4.1e-08 62.0 92 41.3
TAR636G3383 Trochodendron aralioides HOM05D002678 ORTHO05D002920 4.1e-08 62.0 76 44.7
unitig_744.g24623 Utricularia gibba HOM05D002678 ORTHO05D002920 4.1e-08 62.0 57 52.6
AUR62001571 Chenopodium quinoa HOM05D002678 ORTHO05D002920 5.4e-08 61.6 81 45.7
Gohir.A09G160000 Gossypium hirsutum HOM05D002678 ORTHO05D002920 5.4e-08 61.6 84 44.0
Gorai.006G177000 Gossypium raimondii HOM05D002678 ORTHO05D002920 5.4e-08 61.6 84 44.0
QL01p034494 Quercus lobata HOM05D002678 ORTHO05D002920 5.4e-08 61.6 71 45.1
TPR.G10526 Trifolium pratense HOM05D002678 ORTHO05D002920 5.4e-08 61.6 74 44.6
CSS0019295 Camellia sinensis var. sinensis HOM05D002678 ORTHO05D002920 7.1e-08 61.2 72 44.4
CsaV3_6G022030 Cucumis sativus L. HOM05D002678 ORTHO05D002920 7.1e-08 61.2 82 45.1
Dinv35670 Davidia involucrata HOM05D002678 ORTHO05D002920 9.2e-08 60.8 92 41.3
Gohir.D09G155600 Gossypium hirsutum HOM05D002678 ORTHO05D002920 9.2e-08 60.8 84 44.0
Hma1.2p1_0035F.1_g021820 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 9.2e-08 60.8 69 46.4
Lj5g0022817 Lotus japonicus HOM05D002678 ORTHO05D002920 9.2e-08 60.8 70 45.7
Potri.006G215000 Populus trichocarpa HOM05D002678 ORTHO05D002920 9.2e-08 60.8 91 41.8
Potri.016G081600 Populus trichocarpa HOM05D002678 ORTHO05D002920 9.2e-08 60.8 85 42.4
Migut.N02647 Erythranthe guttata HOM05D002678 ORTHO05D002920 1.2e-07 60.5 117 40.2
Lalb_Chr25g0289391 Lupinus albus HOM05D002678 ORTHO05D002920 1.2e-07 60.5 85 38.8
Cfa017459 Carpinus fangiana HOM05D002678 ORTHO05D002920 1.6e-07 60.1 71 46.5
AUR62020213 Chenopodium quinoa HOM05D002678 ORTHO05D002920 1.6e-07 60.1 67 47.8
Glyma.13G134700 Glycine max HOM05D002678 ORTHO05D002920 1.6e-07 60.1 80 42.5
HanXRQChr04g0110311 Helianthus annuus HOM05D002678 ORTHO05D002920 1.6e-07 60.1 95 38.9
Lsat_1_v5_gn_6_26380 Lactuca sativa HOM05D002678 ORTHO05D002920 1.6e-07 60.1 90 41.1
SalBow3G1187 Salvia bowleyana HOM05D002678 ORTHO05D002920 1.6e-07 60.1 89 42.7
Sc01g0003810 Simmondsia chinensis HOM05D002678 ORTHO05D002920 1.6e-07 60.1 84 42.9
Cc01_g12070 Coffea canephora HOM05D002678 ORTHO05D002920 2.1e-07 59.7 93 40.9
Actinidia37266 Actinidia chinensis HOM05D002678 ORTHO05D002920 2.7e-07 59.3 72 44.4
EL10Ac7g16278 Beta vulgaris HOM05D002678 ORTHO05D002920 2.7e-07 59.3 81 43.2
Cpa.g.sc3922.1 Carica papaya HOM05D002678 ORTHO05D002920 2.7e-07 59.3 68 47.1
COL.COLO4_07093 Corchorus olitorius HOM05D002678 ORTHO05D002920 2.7e-07 59.3 80 47.5
DCAR_017751 Daucus carota HOM05D002678 ORTHO05D002920 2.7e-07 59.3 74 45.9
Oeu040266.1 Olea europaea HOM05D002678 ORTHO05D002920 2.7e-07 59.3 86 46.5
DCAR_015584 Daucus carota HOM05D002678 ORTHO05D002920 3.5e-07 58.9 110 33.6
Gohir.A04G078100 Gossypium hirsutum HOM05D002678 ORTHO05D002920 3.5e-07 58.9 84 46.4
Lsat_1_v5_gn_5_167180 Lactuca sativa HOM05D002678 ORTHO05D002920 3.5e-07 58.9 81 40.7
MBI14_g21098_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 3.5e-07 58.9 61 49.2
MD04G1116500 Malus domestica HOM05D002678 ORTHO05D002920 3.5e-07 58.9 73 43.8
MD12G1132300 Malus domestica HOM05D002678 ORTHO05D002920 3.5e-07 58.9 73 43.8
Phvul.003G063400 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 3.5e-07 58.9 92 46.7
PGSC0003DMG400030480 Solanum tuberosum HOM05D002678 ORTHO05D002920 3.5e-07 58.9 77 46.8
arahy.Tifrunner.gnm1.ann1.X1SQMY Arachis hypogaea HOM05D002678 ORTHO05D002920 4.6e-07 58.5 85 40.0
CANSAT80G0424 Cannabis sativa HOM05D002678 ORTHO05D002920 4.6e-07 58.5 86 40.7
Glyma.10G046800 Glycine max HOM05D002678 ORTHO05D002920 4.6e-07 58.5 78 44.9
Gohir.D04G117300 Gossypium hirsutum HOM05D002678 ORTHO05D002920 4.6e-07 58.5 84 46.4
Gorai.009G422300 Gossypium raimondii HOM05D002678 ORTHO05D002920 4.6e-07 58.5 84 46.4
Phvul.004G085094 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 4.6e-07 58.5 92 46.7
Phvul.L002927 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 4.6e-07 58.5 92 46.7
Eucgr.A01213 Eucalyptus grandis HOM05D002678 ORTHO05D002920 6.0e-07 58.2 84 42.9
HanXRQChr14g0429171 Helianthus annuus HOM05D002678 ORTHO05D002920 6.0e-07 58.2 84 39.3
Nitab4.5_0000182g0070 Nicotiana tabacum HOM05D002678 ORTHO05D002920 6.0e-07 58.2 78 46.2
Phvul.007G160800 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 6.0e-07 58.2 79 44.3
Rhsim05G0185100 Rhododendron simsii HOM05D002678 ORTHO05D002920 6.0e-07 58.2 84 40.5
MELO3C025706.2 Cucumis melo HOM05D002678 ORTHO05D002920 7.8e-07 57.8 77 42.9
Lj1g0018959 Lotus japonicus HOM05D002678 ORTHO05D002920 7.8e-07 57.8 90 41.1
ATR0759G110 Amborella trichopoda HOM05D002678 ORTHO05D002920 1.0e-06 57.4 80 41.2
Gohir.D08G009900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.0e-06 57.4 87 39.1
arahy.Tifrunner.gnm1.ann1.2B715G Arachis hypogaea HOM05D002678 ORTHO05D002920 1.3e-06 57.0 73 43.8
arahy.Tifrunner.gnm1.ann1.FZ8WY7 Arachis hypogaea HOM05D002678 ORTHO05D002920 1.3e-06 57.0 73 43.8
Haze_20701 Corylus avellana HOM05D002678 ORTHO05D002920 1.3e-06 57.0 85 40.0
Eucgr.K03179 Eucalyptus grandis HOM05D002678 ORTHO05D002920 1.3e-06 57.0 98 39.8
FvH4_6g14750 Fragaria vesca HOM05D002678 ORTHO05D002920 1.3e-06 57.0 77 42.9
FAN02G3512 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.3e-06 57.0 77 42.9
FAN05G1053 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.3e-06 57.0 77 42.9
FAN09G4043 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.3e-06 57.0 77 42.9
FAN14G4174 Fragaria x ananassa HOM05D002678 ORTHO05D002920 1.3e-06 57.0 77 42.9
Gohir.A08G000129 Gossypium hirsutum HOM05D002678 ORTHO05D002920 1.3e-06 57.0 91 40.7
Gorai.004G003100 Gossypium raimondii HOM05D002678 ORTHO05D002920 1.3e-06 57.0 91 40.7
PGR004G2176 Punica granatum HOM05D002678 ORTHO05D002920 1.3e-06 57.0 75 45.3
VMungo0720G1849 Vigna mungo HOM05D002678 ORTHO05D002920 1.3e-06 57.0 70 47.1
ClCG02G020590 Citrullus lanatus HOM05D002678 ORTHO05D002920 1.7e-06 56.6 77 41.6
Hma1.2p1_0746F.1_g212310 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 1.7e-06 56.6 95 41.1
vmacro03134 Vaccinium macrocarpon HOM05D002678 ORTHO05D002920 1.7e-06 56.6 70 41.4
Aqoxy4G03090 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 2.3e-06 56.2 84 41.7
Thhalv10002850m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 2.3e-06 56.2 57 45.6
RcHm_v2.0_Chr3g0467961 Rosa chinensis HOM05D002678 ORTHO05D002920 2.3e-06 56.2 77 41.6
ECA248G3075 Erigeron canadensis HOM05D002678 ORTHO05D002920 3.0e-06 55.8 88 38.6
Psat3g048080 Pisum sativum HOM05D002678 ORTHO05D002920 3.0e-06 55.8 51 49.0
PGR004G2814 Punica granatum HOM05D002678 ORTHO05D002920 3.0e-06 55.8 84 41.7
Thecc.05G048400 Theobroma cacao HOM05D002678 ORTHO05D002920 3.0e-06 55.8 81 43.2
arahy.Tifrunner.gnm1.ann1.DCG74N Arachis hypogaea HOM05D002678 ORTHO05D002920 3.9e-06 55.5 71 46.5
Nitab4.5_0000270g0250 Nicotiana tabacum HOM05D002678 ORTHO05D002920 3.9e-06 55.5 77 45.5
PGSC0003DMG400015526 Solanum tuberosum HOM05D002678 ORTHO05D002920 3.9e-06 55.5 86 43.0
CiPaw.09G186200 Carya illinoinensis HOM05D002678 ORTHO05D002920 5.1e-06 55.1 79 40.5
DCAR_018868 Daucus carota HOM05D002678 ORTHO05D002920 5.1e-06 55.1 89 36.0
Duzib106G2004 Durio zibethinus HOM05D002678 ORTHO05D002920 5.1e-06 55.1 66 45.5
Gohir.D07G099200 Gossypium hirsutum HOM05D002678 ORTHO05D002920 5.1e-06 55.1 88 40.9
Gorai.001G106900 Gossypium raimondii HOM05D002678 ORTHO05D002920 5.1e-06 55.1 88 40.9
Sabra06G0166000 Salix brachista HOM05D002678 ORTHO05D002920 5.1e-06 55.1 83 38.6
COL.COLO4_18420 Corchorus olitorius HOM05D002678 ORTHO05D002920 6.6e-06 54.7 63 47.6
Solyc11g072890.1 Solanum lycopersicum HOM05D002678 ORTHO05D002920 6.6e-06 54.7 81 45.7
SGA_v2.0_scaffold94G28644 Striga asiatica HOM05D002678 ORTHO05D002920 6.6e-06 54.7 54 48.1
CiPaw.13G102100 Carya illinoinensis HOM05D002678 ORTHO05D002920 8.6e-06 54.3 88 43.2
Thecc.09G330900 Theobroma cacao HOM05D002678 ORTHO05D002920 8.6e-06 54.3 84 42.9


User provided reference genes

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