Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold193G40720 Striga asiatica HOM05D005360 ORTHO05D006501 8.7e-148 526.9 264 100.0
Migut.D02306 Erythranthe guttata HOM05D005360 ORTHO05D006501 1.1e-110 403.7 267 76.0
MSTRG.21078 Avicennia marina HOM05D005360 ORTHO05D006501 4.4e-107 391.7 267 74.9
Dinv29396 Davidia involucrata HOM05D005360 ORTHO05D006501 6.5e-103 377.9 270 69.6
Hma1.2p1_0051F.1_g029700 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 7.2e-102 374.4 270 69.6
CSS0014580 Camellia sinensis var. sinensis HOM05D005360 ORTHO05D006501 2.1e-101 372.9 269 69.5
Lj1A216T24 Lonicera japonica HOM05D005360 ORTHO05D006501 2.3e-100 369.4 270 68.9
Rhsim13G0102900 Rhododendron simsii HOM05D005360 ORTHO05D006501 5.2e-100 368.2 271 69.7
Nitab4.5_0000442g0050 Nicotiana tabacum HOM05D005360 ORTHO05D006501 1.1e-99 367.1 270 69.6
vmacro03239 Vaccinium macrocarpon HOM05D005360 ORTHO05D006501 1.3e-98 363.6 270 68.5
GSVIVG01031434001 Vitis vinifera HOM05D005360 ORTHO05D006501 1.4e-97 360.1 244 73.0
Cc04_g14880 Coffea canephora HOM05D005360 ORTHO05D006501 7.0e-97 357.8 253 68.8
CAN.G546.64 Capsicum annuum HOM05D005360 ORTHO05D006501 2.0e-96 356.3 249 70.7
Eucgr.B03910 Eucalyptus grandis HOM05D005360 ORTHO05D006501 1.9e-94 349.7 237 73.4
Solyc11g066610.2 Solanum lycopersicum HOM05D005360 ORTHO05D006501 2.5e-94 349.4 270 64.8
Sopen11g026340 Solanum pennellii HOM05D005360 ORTHO05D006501 5.5e-94 348.2 270 64.4
Manes.11G154700 Manihot esculenta HOM05D005360 ORTHO05D006501 7.2e-94 347.8 238 72.7
TAR633G1180 Trochodendron aralioides HOM05D005360 ORTHO05D006501 2.7e-93 345.9 236 71.6
QL01p014311 Quercus lobata HOM05D005360 ORTHO05D006501 4.7e-93 345.1 236 72.0
Actinidia24162 Actinidia chinensis HOM05D005360 ORTHO05D006501 6.1e-93 344.7 253 68.4
PGSC0003DMG400000427 Solanum tuberosum HOM05D005360 ORTHO05D006501 8.0e-93 344.4 239 69.9
Nn6g35157 Nelumbo nucifera HOM05D005360 ORTHO05D006501 1.0e-92 344.0 247 70.9
Ciclev10029076m.g Citrus clementina HOM05D005360 ORTHO05D006501 3.0e-92 342.4 238 71.0
Thecc.09G295200 Theobroma cacao HOM05D005360 ORTHO05D006501 4.0e-92 342.0 237 71.3
HanXRQChr13g0403531 Helianthus annuus HOM05D005360 ORTHO05D006501 2.0e-91 339.7 235 70.2
Haze_23502 Corylus avellana HOM05D005360 ORTHO05D006501 4.4e-91 338.6 246 70.3
CiPaw.14G105400 Carya illinoinensis HOM05D005360 ORTHO05D006501 9.8e-91 337.4 238 70.6
Hund07728 Selenicereus undatus HOM05D005360 ORTHO05D006501 9.8e-91 337.4 236 69.1
DCAR_015495 Daucus carota HOM05D005360 ORTHO05D006501 2.8e-90 335.9 264 63.6
TWI31G0773 Tripterygium wilfordii HOM05D005360 ORTHO05D006501 2.8e-90 335.9 237 70.0
Ca_01695_v3 Cicer arietinum L. HOM05D005360 ORTHO05D006501 7.0e-89 331.3 237 67.9
EL10Ac9g21036 Beta vulgaris HOM05D005360 ORTHO05D006501 3.5e-88 328.9 264 65.5
MD11G1152100 Malus domestica HOM05D005360 ORTHO05D006501 5.9e-88 328.2 235 71.9
Glyma.13G219600 Glycine max HOM05D005360 ORTHO05D006501 7.7e-88 327.8 240 65.8
RcHm_v2.0_Chr5g0056101 Rosa chinensis HOM05D005360 ORTHO05D006501 7.7e-88 327.8 235 68.5
Ah.01g016120 Amaranthus hybridus HOM05D005360 ORTHO05D006501 1.3e-87 327.0 241 66.8
TPR.G32397 Trifolium pratense HOM05D005360 ORTHO05D006501 1.3e-87 327.0 241 65.6
MBI01_g19099_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 2.2e-87 326.2 233 69.1
Aqoxy1G01027 Aquilegia oxysepala HOM05D005360 ORTHO05D006501 4.2e-86 322.0 236 66.5
CANSAT64G2995 Cannabis sativa HOM05D005360 ORTHO05D006501 1.6e-85 320.1 236 67.8
Atru.chr3.3432 Acer truncatum HOM05D005360 ORTHO05D006501 2.1e-85 319.7 232 67.7
CANSAT64G2904 Cannabis sativa HOM05D005360 ORTHO05D006501 3.6e-85 318.9 236 66.9
FvH4_3g30230 Fragaria vesca HOM05D005360 ORTHO05D006501 8.0e-85 317.8 251 61.4
Sc21g0004290 Simmondsia chinensis HOM05D005360 ORTHO05D006501 2.3e-84 316.2 242 64.5
MD03G1130500 Malus domestica HOM05D005360 ORTHO05D006501 5.2e-84 315.1 236 69.1
ATR0665G582 Amborella trichopoda HOM05D005360 ORTHO05D006501 1.2e-83 313.9 230 66.1
Phvul.006G166300 Phaseolus vulgaris HOM05D005360 ORTHO05D006501 1.2e-83 313.9 240 64.2
BraA08t35436Z Brassica rapa HOM05D005360 ORTHO05D006501 2.0e-83 313.2 260 59.6
Lj3g0014716 Lotus japonicus HOM05D005360 ORTHO05D006501 2.0e-83 313.2 236 65.7
A08p35270 Brassica napus HOM05D005360 ORTHO05D006501 5.7e-83 311.6 260 59.2
Medtr2g084545 Medicago truncatula HOM05D005360 ORTHO05D006501 9.8e-83 310.8 225 65.8
Sabra09G0000500 Salix brachista HOM05D005360 ORTHO05D006501 9.8e-83 310.8 267 59.2
Gohir.D07G110200 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.7e-82 310.1 246 63.0
Potri.009G002000 Populus trichocarpa HOM05D005360 ORTHO05D006501 1.7e-82 310.1 231 67.1
Aa31LG1G18020 Aethionema arabicum HOM05D005360 ORTHO05D006501 2.2e-82 309.7 239 63.6
AT1G08220 Arabidopsis thaliana HOM05D005360 ORTHO05D006501 4.9e-82 308.5 263 59.3
Gorai.001G118400 Gossypium raimondii HOM05D005360 ORTHO05D006501 6.3e-82 308.1 246 62.6
Psat5g252440 Pisum sativum HOM05D005360 ORTHO05D006501 8.3e-82 307.8 235 64.3
Carub.0001s0758 Capsella rubella HOM05D005360 ORTHO05D006501 1.4e-81 307.0 257 59.9
THA.LOC104826399 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 1.4e-81 307.0 253 61.7
Thhalv10008429m.g Eutrema salsugineum HOM05D005360 ORTHO05D006501 1.8e-81 306.6 264 58.3
Sp1g06870 Schrenkiella parvula HOM05D005360 ORTHO05D006501 2.4e-81 306.2 254 61.0
CARHR008050 Cardamine hirsuta HOM05D005360 ORTHO05D006501 4.1e-81 305.4 244 61.1
AL1G18630 Arabidopsis lyrata HOM05D005360 ORTHO05D006501 5.4e-81 305.1 245 60.8
C08p03560 Brassica napus HOM05D005360 ORTHO05D006501 5.4e-81 305.1 260 58.8
Lalb_Chr24g0395031 Lupinus albus HOM05D005360 ORTHO05D006501 5.4e-81 305.1 254 59.8
MBI01_g31369_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 9.2e-81 304.3 233 66.1
BolC8t47160H Brassica oleracea HOM05D005360 ORTHO05D006501 3.5e-80 302.4 260 58.5
THA.LOC104800565 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 5.9e-80 301.6 250 61.2
C08p50100 Brassica napus HOM05D005360 ORTHO05D006501 7.7e-80 301.2 239 62.8
BolC8t52540H Brassica oleracea HOM05D005360 ORTHO05D006501 7.7e-80 301.2 239 62.8
CDE09G0858 Ceratophyllum demersum HOM05D005360 ORTHO05D006501 1.7e-79 300.1 240 62.1
PSO339G5504 Papaver somniferum HOM05D005360 ORTHO05D006501 3.8e-79 298.9 235 61.3
BcaC07g42518 Brassica carinata HOM05D005360 ORTHO05D006501 8.6e-79 297.7 241 62.7
SalBow6G0303 Salvia bowleyana HOM05D005360 ORTHO05D006501 1.5e-78 297.0 286 57.0
PSO063G2369 Papaver somniferum HOM05D005360 ORTHO05D006501 1.9e-78 296.6 235 60.9
Lsat_1_v5_gn_6_42160 Lactuca sativa HOM05D005360 ORTHO05D006501 2.5e-78 296.2 235 63.0
unitig_899.g14961 Utricularia gibba HOM05D005360 ORTHO05D006501 5.6e-78 295.0 245 62.4
AUR62031793 Chenopodium quinoa HOM05D005360 ORTHO05D006501 2.1e-77 293.1 236 62.3
Peaxi162Scf00150g00315 Petunia axillaris HOM05D005360 ORTHO05D006501 3.6e-77 292.4 225 66.7
PGR102G1574 Punica granatum HOM05D005360 ORTHO05D006501 2.3e-76 289.7 238 62.2
FAN11G3336 Fragaria x ananassa HOM05D005360 ORTHO05D006501 2.0e-75 286.6 251 57.8
Sed0004275 Sechium edule HOM05D005360 ORTHO05D006501 9.8e-75 284.3 206 68.9
CsaV3_6G014530 Cucumis sativus L. HOM05D005360 ORTHO05D006501 1.3e-74 283.9 198 71.7
FAN21G0874 Fragaria x ananassa HOM05D005360 ORTHO05D006501 1.3e-74 283.9 251 56.6
MELO3C021472.2 Cucumis melo HOM05D005360 ORTHO05D006501 1.1e-73 280.8 198 71.7
Gohir.A07G106300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.4e-73 279.6 236 60.6
HPP92_015033 Vanilla planifolia HOM05D005360 ORTHO05D006501 1.9e-70 270.0 224 62.5
BcaB03g13345 Brassica carinata HOM05D005360 ORTHO05D006501 3.3e-70 269.2 247 55.1
arahy.Tifrunner.gnm1.ann1.9X9VA5 Arachis hypogaea HOM05D005360 ORTHO05D006501 3.6e-69 265.8 219 61.6
TAR633G1639 Trochodendron aralioides HOM05D005360 ORTHO05D006501 8.0e-69 264.6 187 69.5
Zm00001eb345720 Zea mays HOM05D005360 ORTHO05D006501 1.3e-66 257.3 230 55.2
Os05g0176500 Oryza sativa ssp. japonica HOM05D005360 ORTHO05D006501 4.9e-66 255.4 245 52.7
COL.COLO4_19249 Corchorus olitorius HOM05D000737 ORTHO05D000581 6.4e-66 255.0 192 67.2
Duzib168G1167 Durio zibethinus HOM05D005360 ORTHO05D006501 3.2e-65 252.7 187 66.3
arahy.Tifrunner.gnm1.ann1.E5WW1G Arachis hypogaea HOM05D005360 ORTHO05D004899 5.4e-65 251.9 193 65.3
HPP92_015112 Vanilla planifolia HOM05D005360 ORTHO05D006501 7.8e-64 248.1 238 58.0
SHI06160 Sapria himalayana HOM05D005360 ORTHO05D006501 1.7e-63 246.9 219 58.9
Gohir.A07G000166 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.6e-61 239.2 186 64.0
Gohir.1Z049633 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.1e-60 236.1 181 65.2
Prupe.6G115300 Prunus persica HOM05D005360 ORTHO05D006501 6.2e-53 211.8 160 69.4
Gohir.A05G054800 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.9e-50 203.0 207 54.6
Hma1.2p1_0051F.1_g029710 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 2.1e-48 196.8 124 74.2
Oeu026987.1 Olea europaea HOM05D005360 ORTHO05D006501 4.3e-46 189.1 122 73.0
Gohir.A02G097303 Gossypium hirsutum HOM05D005360 ORTHO05D006501 8.1e-45 184.9 225 51.6
VMungo0540G0253 Vigna mungo HOM05D005360 ORTHO05D006501 9.9e-43 177.9 143 62.9
Gohir.A10G063101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 6.9e-36 155.2 150 56.7
SMO116G0134 Selaginella moellendorffii HOM05D005360 ORTHO05D006501 2.2e-34 150.2 254 33.9
Cpa.g.sc2403.1 Carica papaya HOM05D005360 ORTHO05D006501 5.4e-33 145.6 126 57.9
Gohir.A09G043650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 6.0e-32 142.1 128 58.6
Gohir.A11G191650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.3e-31 140.2 252 40.5
CiPaw.13G142900 Carya illinoinensis HOM05D005360 ORTHO05D006501 2.1e-29 133.7 125 56.8
CiPaw.13G143100 Carya illinoinensis HOM05D005360 ORTHO05D006501 4.0e-28 129.4 116 57.8
AUR62023988 Chenopodium quinoa HOM05D005360 ORTHO05D006501 4.6e-24 115.9 84 69.0
Gohir.A06G034300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 7.9e-24 115.2 103 58.3
FAN09G1017 Fragaria x ananassa HOM05D005360 ORTHO05D006501 5.6e-22 109.0 80 65.0
Gohir.A05G334300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.4e-20 104.4 108 54.6
FAN09G0332 Fragaria x ananassa HOM05D005360 ORTHO05D006501 5.3e-20 102.4 74 64.9
Gohir.A06G100002 Gossypium hirsutum HOM05D005360 ORTHO05D006501 4.5e-19 99.4 74 66.2
Gohir.A06G038884 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.0e-18 98.2 127 47.2
Zm00001eb137350 Zea mays HOM05D005360 ORTHO05D006501 2.1e-16 90.5 82 51.2
FAN04G1623 Fragaria x ananassa HOM05D005360 ORTHO05D006501 3.5e-16 89.7 75 56.0
Eucgr.L03607 Eucalyptus grandis HOM05D005360 ORTHO05D006501 3.0e-15 86.7 66 60.6
Gohir.A11G000150 Gossypium hirsutum HOM05D005360 ORTHO05D026494 3.0e-15 86.7 82 56.1
BcaC07g37801 Brassica carinata HOM05D005360 ORTHO05D006501 3.9e-15 86.3 98 45.9
SEGI_40723 Sequoiadendron giganteum HOM05D005360 ORTHO05D006501 5.1e-15 85.9 91 47.3
Gohir.A06G133300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 9.6e-14 81.6 99 48.5
Gohir.1Z049508 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.3e-13 81.3 87 49.4
Gohir.A02G089101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.8e-10 69.7 60 56.7
Actinidia07196 Actinidia chinensis HOM05D005360 ORTHO05D006501 9.3e-09 65.1 138 31.9
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 1.8e-07 60.8 45 68.9
Gohir.A01G162600 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.0e-07 60.1 139 30.2
Zm00001eb350410 Zea mays HOM05D005360 ORTHO05D006501 8.7e-07 58.5 45 53.3
Zm00001eb410990 Zea mays HOM05D005360 ORTHO05D006501 8.7e-07 58.5 45 53.3
Zm00001eb228200 Zea mays HOM05D005360 ORTHO05D006501 1.1e-06 58.2 53 45.3
Zm00001eb229280 Zea mays HOM05D005360 ORTHO05D006501 1.1e-06 58.2 53 45.3
Cfa022886 Carpinus fangiana HOM05D005360 ORTHO05D006501 1.5e-06 57.8 214 27.6
SalBow1G4086 Salvia bowleyana HOM05D005360 ORTHO05D006501 2.5e-06 57.0 103 37.9
ECA240G4443 Erigeron canadensis HOM05D000331 ORTHO05D006501 5.7e-06 55.8 56 51.8


User provided reference genes

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