Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 0.0e+00 1611.7 850 100.0
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 2.9e-269 932.2 798 61.9
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 3.0e-266 922.2 794 61.8
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 6.9e-255 884.4 797 61.1
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 2.5e-252 875.9 775 60.6
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 5.5e-252 874.8 775 60.6
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 5.7e-249 864.8 744 63.4
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 7.4e-249 864.4 773 59.0
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.6e-248 863.2 768 61.1
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.4e-244 850.1 690 67.5
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 4.2e-244 848.6 696 64.8
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.6e-243 846.7 860 55.6
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.6e-243 845.1 840 57.7
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 7.9e-243 844.3 793 61.8
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.6e-240 836.6 812 57.4
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 2.8e-240 835.9 686 65.5
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 1.1e-239 833.9 818 59.5
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.8e-239 833.2 769 58.8
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 3.1e-239 832.4 588 70.6
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 3.1e-239 832.4 875 55.3
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.1e-239 832.4 875 55.3
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 2.6e-238 829.3 741 61.3
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 4.5e-238 828.6 539 71.6
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.9e-237 825.9 704 64.3
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.9e-237 825.9 539 71.4
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.1e-236 823.9 688 65.7
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.9e-236 823.2 694 62.2
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 7.9e-235 817.8 564 67.9
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.0e-234 817.4 856 55.8
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 2.3e-234 816.2 758 60.3
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 5.1e-234 815.1 691 64.7
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 8.8e-234 814.3 854 55.9
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 4.3e-233 812.0 696 61.2
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 9.7e-233 810.8 684 63.7
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 2.8e-232 809.3 703 65.4
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.7e-232 808.9 747 61.0
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 4.1e-231 805.4 719 62.2
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.5e-230 803.5 534 69.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 1.3e-229 800.4 705 58.3
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 3.2e-228 795.8 669 61.1
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 4.2e-228 795.4 728 60.0
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.2e-227 793.9 703 61.5
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 1.8e-226 790.0 811 56.0
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.0e-226 789.3 707 59.1
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 3.9e-226 788.9 748 60.6
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 5.1e-226 788.5 689 63.1
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 5.1e-226 788.5 786 57.6
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 8.8e-226 787.7 707 62.0
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 1.5e-225 786.9 707 61.1
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 3.3e-225 785.8 707 61.2
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 4.4e-225 785.4 698 62.5
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 5.7e-225 785.0 577 66.2
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 7.4e-225 784.6 707 62.1
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 2.2e-224 783.1 782 55.0
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 3.7e-224 782.3 675 65.3
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 1.8e-223 780.0 692 60.4
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 4.1e-223 778.9 748 60.3
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 7.0e-223 778.1 813 57.8
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 9.1e-223 777.7 705 61.4
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 1.6e-222 776.9 699 61.9
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 4.5e-222 775.4 800 55.9
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.0e-221 774.2 713 59.9
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.1e-220 770.8 723 59.6
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 2.5e-220 769.6 796 56.7
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 5.5e-220 768.5 883 52.1
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 4.7e-219 765.4 700 60.9
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.4e-218 763.8 752 56.2
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.8e-218 763.5 766 57.6
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 3.0e-218 762.7 705 58.6
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.1e-217 760.8 696 62.6
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 2.0e-217 760.0 752 58.1
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 1.3e-216 757.3 750 57.9
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 1.7e-213 746.9 743 57.3
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 5.0e-213 745.3 743 55.9
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 4.2e-212 742.3 612 63.4
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 7.2e-212 741.5 735 57.0
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 2.7e-211 739.6 749 56.7
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 4.7e-211 738.8 765 57.5
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 6.1e-211 738.4 585 64.6
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 1.4e-210 737.3 742 56.3
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 2.3e-210 736.5 802 53.2
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.2e-206 724.2 686 54.4
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 6.5e-205 718.4 920 49.7
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 4.7e-203 712.2 664 60.5
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.0e-193 680.2 829 51.9
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 8.0e-187 658.3 764 51.0
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 4.6e-174 615.9 617 57.7
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 1.5e-172 610.9 565 57.5
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.5e-153 547.7 339 70.8
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.6e-150 537.7 504 55.2
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 3.9e-149 533.1 534 50.2
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.1e-146 525.0 769 45.6
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 7.4e-140 502.3 331 71.3
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 1.9e-132 477.6 427 57.1
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.4e-130 470.7 442 53.8
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 6.7e-125 452.6 434 58.1
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 8.7e-125 452.2 281 72.6
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 4.3e-124 449.9 407 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 2.5e-111 407.5 352 56.2
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.7e-102 377.5 426 46.9
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 2.5e-87 327.8 410 54.4
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 8.9e-77 292.7 190 70.5
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.2e-76 292.4 520 48.1
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 2.8e-70 271.2 197 67.5
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 1.3e-59 235.7 340 41.5
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 4.1e-50 204.1 174 55.7
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 6.6e-48 196.8 267 56.6
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-30 137.1 394 29.2
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.2e-28 132.9 91 67.0
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.1e-21 108.2 119 50.4
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.9e-19 101.7 78 62.8
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.6e-12 78.6 74 47.3
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.2e-10 71.6 196 33.7


User provided reference genes

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