Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold193G40664 Striga asiatica HOM05D004099 ORTHO05D004777 1.6e-71 273.1 187 100.0
MSTRG.11808 Avicennia marina HOM05D004099 ORTHO05D004777 4.1e-11 72.4 106 38.7
CARHR117460 Cardamine hirsuta HOM05D004099 ORTHO05D004777 1.7e-09 67.0 101 41.6
Carub.0006s2274 Capsella rubella HOM05D004099 ORTHO05D004777 1.5e-08 63.9 97 37.1
Carub.0004s0391 Capsella rubella HOM05D004099 ORTHO05D004777 3.3e-08 62.8 72 45.8
Sabra06G0211400 Salix brachista HOM05D004099 ORTHO05D004777 7.3e-08 61.6 127 37.0
AL4G15100 Arabidopsis lyrata HOM05D004099 ORTHO05D004777 9.6e-08 61.2 102 41.2
BcaNung04135 Brassica carinata HOM05D004099 ORTHO05D004777 1.6e-07 60.5 114 39.5
C07p58690 Brassica napus HOM05D004099 ORTHO05D004777 1.6e-07 60.5 114 39.5
BolC7t46319H Brassica oleracea HOM05D004099 ORTHO05D004777 1.6e-07 60.5 114 39.5
CANSAT25G3311 Cannabis sativa HOM05D004099 ORTHO05D004777 2.1e-07 60.1 107 36.4
CARHR239380 Cardamine hirsuta HOM05D004099 ORTHO05D004777 2.1e-07 60.1 92 42.4
Thhalv10026165m.g Eutrema salsugineum HOM05D004099 ORTHO05D004777 2.1e-07 60.1 123 36.6
Manes.16G135100 Manihot esculenta HOM05D004099 ORTHO05D004777 2.1e-07 60.1 97 38.1
Medtr1g009640 Medicago truncatula HOM05D004099 ORTHO05D004777 2.1e-07 60.1 104 37.5
Potri.018G008200 Populus trichocarpa HOM05D004099 ORTHO05D004777 2.1e-07 60.1 99 37.4
AL7G20550 Arabidopsis lyrata HOM05D004099 ORTHO05D004777 2.8e-07 59.7 102 41.2
A03p60800 Brassica napus HOM05D004099 ORTHO05D004777 2.8e-07 59.7 112 37.5
BraA03t15116Z Brassica rapa HOM05D004099 ORTHO05D004777 2.8e-07 59.7 112 37.5
TPR.G11970 Trifolium pratense HOM05D004099 ORTHO05D004777 2.8e-07 59.7 104 36.5
Aa31LG7G12320 Aethionema arabicum HOM05D004099 ORTHO05D004777 3.6e-07 59.3 119 36.1
Sp7g29350 Schrenkiella parvula HOM05D004099 ORTHO05D004777 3.6e-07 59.3 72 45.8
Ah.12g061250 Amaranthus hybridus HOM05D004099 ORTHO05D004777 4.7e-07 58.9 84 40.5
BcaNung04134 Brassica carinata HOM05D004099 ORTHO05D004777 4.7e-07 58.9 114 39.5
CARHR188560 Cardamine hirsuta HOM05D004099 ORTHO05D004777 4.7e-07 58.9 97 37.1
Migut.A00433 Erythranthe guttata HOM05D004099 ORTHO05D004777 4.7e-07 58.9 122 32.8
Sc06g0000180 Simmondsia chinensis HOM05D004099 ORTHO05D004777 6.2e-07 58.5 120 40.8
AT4G31510 Arabidopsis thaliana HOM05D004099 ORTHO05D004777 8.1e-07 58.2 100 41.0
AT5G24890 Arabidopsis thaliana HOM05D004099 ORTHO05D004777 8.1e-07 58.2 97 37.1
EL10Ac2g02414 Beta vulgaris HOM05D004099 ORTHO05D004777 8.1e-07 58.2 83 42.2
BcaB06g27983 Brassica carinata HOM05D004099 ORTHO05D004777 8.1e-07 58.2 86 40.7
BcaC02g08443 Brassica carinata HOM05D004099 ORTHO05D004777 8.1e-07 58.2 86 40.7
BcaC07g40920 Brassica carinata HOM05D004099 ORTHO05D004777 8.1e-07 58.2 86 40.7
A04p18910 Brassica napus HOM05D004099 ORTHO05D004777 8.1e-07 58.2 86 40.7
C04p54150 Brassica napus HOM05D004099 ORTHO05D004777 8.1e-07 58.2 86 40.7
BolC4t26967H Brassica oleracea HOM05D004099 ORTHO05D004777 8.1e-07 58.2 86 40.7
Carub.0007s0905 Capsella rubella HOM05D004099 ORTHO05D004777 8.1e-07 58.2 99 39.4
arahy.Tifrunner.gnm1.ann1.DC2GX7 Arachis hypogaea HOM05D004099 ORTHO05D004777 1.1e-06 57.8 100 37.0
BcaB03g12702 Brassica carinata HOM05D004099 ORTHO05D004777 1.1e-06 57.8 112 36.6
Glyma.06G077200 Glycine max HOM05D004099 ORTHO05D004777 1.1e-06 57.8 82 40.2
Psat6g032840 Pisum sativum HOM05D004099 ORTHO05D004777 1.1e-06 57.8 118 35.6
arahy.Tifrunner.gnm1.ann1.EP35YN Arachis hypogaea HOM05D004099 ORTHO05D004777 1.4e-06 57.4 100 37.0
BcaC04g23565 Brassica carinata HOM05D004099 ORTHO05D004777 1.4e-06 57.4 97 37.1
A09p06360 Brassica napus HOM05D004099 ORTHO05D004777 1.4e-06 57.4 97 37.1
C09p07050 Brassica napus HOM05D004099 ORTHO05D004777 1.4e-06 57.4 97 37.1
BolC9t53621H Brassica oleracea HOM05D004099 ORTHO05D004777 1.4e-06 57.4 97 37.1
Medtr1g045430 Medicago truncatula HOM05D004099 ORTHO05D004777 1.4e-06 57.4 124 35.5
Sp2g22560 Schrenkiella parvula HOM05D004099 ORTHO05D004777 1.4e-06 57.4 97 37.1
BcaB04g19804 Brassica carinata HOM05D004099 ORTHO05D004777 1.8e-06 57.0 114 35.1
BcaB04g19805 Brassica carinata HOM05D004099 ORTHO05D004777 1.8e-06 57.0 114 35.1
Gohir.A05G063600 Gossypium hirsutum HOM05D004099 ORTHO05D004777 1.8e-06 57.0 98 40.8
Atru.chr7.2654 Acer truncatum HOM05D004099 ORTHO05D004777 2.4e-06 56.6 93 38.7
Thhalv10000300m.g Eutrema salsugineum HOM05D004099 ORTHO05D004777 2.4e-06 56.6 116 37.9
Actinidia22257 Actinidia chinensis HOM05D004099 ORTHO05D004777 3.1e-06 56.2 81 39.5
QL12p025350 Quercus lobata HOM05D004099 ORTHO05D004777 3.1e-06 56.2 82 41.5
Sp4g03550 Schrenkiella parvula HOM05D004099 ORTHO05D004777 3.1e-06 56.2 129 34.9
AL6G36570 Arabidopsis lyrata HOM05D004099 ORTHO05D004777 4.0e-06 55.8 94 36.2
BcaC07g40919 Brassica carinata HOM05D004099 ORTHO05D004777 4.0e-06 55.8 80 40.0
A08p18580 Brassica napus HOM05D004099 ORTHO05D004777 4.0e-06 55.8 107 36.4
C08p39160 Brassica napus HOM05D004099 ORTHO05D004777 4.0e-06 55.8 80 40.0
BolC8t51489H Brassica oleracea HOM05D004099 ORTHO05D004777 4.0e-06 55.8 80 40.0
BraA09t41015Z Brassica rapa HOM05D004099 ORTHO05D004777 4.0e-06 55.8 121 36.4
Ca_15654_v3 Cicer arietinum L. HOM05D004099 ORTHO05D004777 4.0e-06 55.8 101 38.6
Ca_15662_v3 Cicer arietinum L. HOM05D004099 ORTHO05D004777 4.0e-06 55.8 101 38.6
Sopen08g022630 Solanum pennellii HOM05D004099 ORTHO05D004777 4.0e-06 55.8 102 38.2
VMungo1309G2218 Vigna mungo HOM05D004099 ORTHO05D004777 4.0e-06 55.8 91 39.6
Thhalv10004845m.g Eutrema salsugineum HOM05D004099 ORTHO05D004777 5.2e-06 55.5 106 37.7
TPR.G34393 Trifolium pratense HOM05D004099 ORTHO05D004777 5.2e-06 55.5 111 35.1
AT2G24550 Arabidopsis thaliana HOM05D004099 ORTHO05D004777 6.8e-06 55.1 124 34.7
BraA08t33820Z Brassica rapa HOM05D004099 ORTHO05D004777 6.8e-06 55.1 108 38.9
Phvul.009G101800 Phaseolus vulgaris HOM05D004099 ORTHO05D004777 6.8e-06 55.1 81 40.7
CiPaw.08G020400 Carya illinoinensis HOM05D004099 ORTHO05D004777 8.9e-06 54.7 82 39.0
Gohir.D05G066200 Gossypium hirsutum HOM05D004099 ORTHO05D004777 8.9e-06 54.7 86 39.5
Gorai.009G067000 Gossypium raimondii HOM05D004099 ORTHO05D004777 8.9e-06 54.7 86 39.5
PGR044G2369 Punica granatum HOM05D004099 ORTHO05D004777 8.9e-06 54.7 77 40.3
RcHm_v2.0_Chr6g0305061 Rosa chinensis HOM05D004099 ORTHO05D004777 8.9e-06 54.7 82 40.2


User provided reference genes

Program Settings