Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 1.2e-106 389.8 192 100.0
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 2.4e-54 216.1 201 61.7
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 6.1e-50 201.4 205 57.6
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 3.0e-49 199.1 206 56.3
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 4.4e-48 195.3 173 60.7
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.8e-47 192.6 189 57.7
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 2.8e-47 192.6 148 65.5
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 8.2e-47 191.0 148 64.9
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 8.2e-47 191.0 148 64.9
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.1e-46 190.7 165 61.2
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 1.4e-46 190.3 212 52.8
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 2.4e-46 189.5 199 54.3
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.1e-46 189.1 148 64.9
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.1e-46 188.7 148 64.9
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 4.1e-46 188.7 173 58.4
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 5.3e-46 188.3 198 52.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 7.0e-46 188.0 153 62.7
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.2e-45 187.2 180 56.7
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.5e-45 186.8 178 55.1
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.5e-45 186.8 143 64.3
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 2.0e-45 186.4 150 63.3
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 2.0e-45 186.4 186 53.2
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.6e-45 186.0 163 60.7
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 2.6e-45 186.0 160 60.6
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.4e-45 185.7 161 59.6
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 3.4e-45 185.7 199 54.3
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 7.7e-45 184.5 184 53.8
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 7.7e-45 184.5 163 60.1
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 7.7e-45 184.5 163 60.1
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 7.7e-45 184.5 177 55.9
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.0e-44 184.1 143 65.7
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.0e-44 184.1 146 63.0
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.0e-44 184.1 146 63.0
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.0e-44 184.1 177 55.9
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.3e-44 183.7 150 61.3
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.7e-44 183.3 167 57.5
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 1.7e-44 183.3 161 60.2
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 1.7e-44 183.3 159 57.9
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 2.2e-44 183.0 168 56.0
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 2.2e-44 183.0 156 60.3
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 2.9e-44 182.6 196 54.1
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 2.9e-44 182.6 160 60.0
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 3.8e-44 182.2 160 57.5
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 3.8e-44 182.2 158 58.9
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 3.8e-44 182.2 168 57.1
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 3.8e-44 182.2 143 64.3
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 5.0e-44 181.8 150 61.3
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 5.0e-44 181.8 153 60.1
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 5.0e-44 181.8 167 56.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 6.5e-44 181.4 157 58.6
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 6.5e-44 181.4 162 58.0
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 8.5e-44 181.0 160 58.8
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 1.1e-43 180.6 160 56.9
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 1.1e-43 180.6 143 63.6
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.1e-43 180.6 175 55.4
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.1e-43 180.6 189 54.0
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 1.1e-43 180.6 144 63.2
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.1e-43 180.6 144 63.2
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.1e-43 180.6 174 54.6
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.4e-43 180.3 160 60.0
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.4e-43 180.3 156 59.6
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 1.4e-43 180.3 175 55.4
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.4e-43 180.3 188 56.4
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.9e-43 179.9 150 60.0
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 3.2e-43 179.1 155 58.7
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 3.2e-43 179.1 151 59.6
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 4.2e-43 178.7 143 62.9
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 4.2e-43 178.7 188 52.1
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 4.2e-43 178.7 157 59.2
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 4.2e-43 178.7 151 58.9
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.5e-43 178.3 192 51.0
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 7.2e-43 177.9 156 57.7
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 7.2e-43 177.9 172 54.1
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 7.2e-43 177.9 152 61.8
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 9.4e-43 177.6 147 62.6
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 9.4e-43 177.6 169 56.2
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 9.4e-43 177.6 173 55.5
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 9.4e-43 177.6 143 62.2
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 1.2e-42 177.2 158 56.3
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.2e-42 177.2 191 53.4
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 2.7e-42 176.0 195 50.8
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 2.7e-42 176.0 195 50.8
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 3.6e-42 175.6 143 60.8
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 4.7e-42 175.3 193 51.3
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 6.1e-42 174.9 144 62.5
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 6.1e-42 174.9 155 58.7
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 8.0e-42 174.5 156 60.3
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.0e-41 174.1 161 60.2
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 1.8e-41 173.3 170 53.5
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 3.0e-41 172.6 156 59.6
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 3.9e-41 172.2 140 60.7
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.1e-40 170.6 143 60.8
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.0e-40 169.9 149 58.4
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 2.6e-40 169.5 173 56.1
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 1.7e-39 166.8 131 62.6
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 3.7e-39 165.6 162 53.1
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.8e-38 163.3 191 48.2
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 2.4e-38 162.9 145 55.2
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 5.3e-38 161.8 145 57.2
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 5.0e-36 155.2 193 42.0
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.2e-35 152.5 150 52.0
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 1.4e-33 147.1 168 46.4
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 2.0e-32 143.3 124 58.1
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 2.2e-31 139.8 145 50.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.6e-29 133.7 184 41.3
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.6e-29 133.7 156 44.9
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 2.5e-27 126.3 148 43.9
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 3.5e-21 105.9 66 74.2
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 4.2e-19 99.0 66 66.7
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 3.6e-18 95.9 75 62.7
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.8e-17 93.6 67 65.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 4.0e-17 92.4 71 64.8
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 2.2e-15 86.7 143 37.1
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 2.2e-15 86.7 160 37.5
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.7e-13 79.7 66 56.1
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 3.1e-09 66.2 91 46.2


User provided reference genes

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