Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 1.9e-124 449.1 220 100.0
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 1.6e-118 429.5 241 90.5
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 4.4e-97 358.2 259 73.0
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 4.9e-96 354.8 259 70.3
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.9e-95 352.8 259 69.9
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.4e-95 352.4 259 69.5
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 1.2e-94 350.1 259 68.7
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.2e-94 350.1 259 69.9
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 2.7e-94 349.0 258 69.8
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.7e-94 349.0 259 69.1
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 7.9e-94 347.4 259 69.5
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 2.3e-93 345.9 259 70.7
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 2.3e-93 345.9 268 67.2
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 2.3e-93 345.9 259 69.1
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 3.9e-93 345.1 259 68.7
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 5.1e-93 344.7 258 67.8
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 6.6e-93 344.4 259 68.7
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 6.6e-93 344.4 259 68.7
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 8.7e-93 344.0 259 68.7
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.5e-92 342.4 259 67.2
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 2.5e-92 342.4 259 66.8
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 5.6e-92 341.3 259 69.1
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 5.6e-92 341.3 259 68.0
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 7.4e-92 340.9 256 69.5
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 9.6e-92 340.5 259 67.2
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.3e-91 340.1 259 67.6
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 2.1e-91 339.3 259 66.8
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 2.8e-91 339.0 259 67.2
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 2.8e-91 339.0 269 66.9
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 3.6e-91 338.6 259 66.8
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 6.2e-91 337.8 259 67.2
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 6.2e-91 337.8 259 66.0
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 6.2e-91 337.8 259 67.6
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 1.1e-90 337.0 259 66.8
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 1.1e-90 337.0 259 66.4
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.4e-90 336.7 259 66.8
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 4.0e-90 335.1 259 66.4
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 5.3e-90 334.7 258 67.4
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 1.2e-89 333.6 259 66.0
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 1.5e-89 333.2 260 65.8
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 2.0e-89 332.8 259 64.9
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 2.0e-89 332.8 259 66.8
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 4.5e-89 331.6 259 66.0
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 4.5e-89 331.6 259 66.0
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 5.8e-89 331.3 259 65.6
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 5.8e-89 331.3 259 65.6
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 5.8e-89 331.3 259 65.6
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 5.8e-89 331.3 259 65.6
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 7.6e-89 330.9 259 65.6
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 7.6e-89 330.9 259 65.6
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 7.6e-89 330.9 259 65.3
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.3e-88 330.1 259 65.6
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 1.7e-88 329.7 259 65.3
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.7e-88 329.7 259 65.3
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.7e-88 329.7 259 65.3
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 1.7e-88 329.7 260 65.4
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 1.7e-88 329.7 258 65.9
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 2.9e-88 328.9 259 65.6
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 6.4e-88 327.8 259 64.9
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-87 326.2 260 64.6
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-87 326.2 260 64.6
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-87 326.2 260 64.6
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-87 326.2 260 64.6
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.4e-87 325.9 262 66.0
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.4e-87 325.9 259 64.5
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 2.4e-87 325.9 259 64.9
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 3.2e-87 325.5 262 63.4
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 4.2e-87 325.1 259 63.3
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.2e-87 325.1 260 63.8
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.2e-87 325.1 260 63.8
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 4.2e-87 325.1 259 64.5
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 4.2e-87 325.1 258 64.3
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 5.5e-87 324.7 259 64.5
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.2e-86 323.6 276 61.6
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 1.2e-86 323.6 259 64.1
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.6e-86 323.2 259 64.1
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 1.6e-86 323.2 259 62.5
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.7e-86 322.4 259 63.7
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 1.0e-85 320.5 264 63.6
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 2.3e-85 319.3 283 60.1
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 3.9e-85 318.5 259 62.2
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 5.6e-84 314.7 259 63.3
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 9.6e-84 313.9 259 63.3
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 9.6e-84 313.9 259 61.8
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 1.3e-83 313.5 259 62.2
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.6e-83 313.2 259 62.9
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 2.1e-83 312.8 259 61.8
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 2.8e-83 312.4 241 67.2
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 2.8e-83 312.4 259 62.5
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 6.9e-82 307.8 259 61.0
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 1.5e-81 306.6 258 63.2
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 7.6e-81 304.3 257 62.3
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.3e-80 303.5 224 67.9
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 2.9e-80 302.4 259 60.6
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 3.2e-79 298.9 259 59.5
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 1.2e-78 297.0 259 61.4
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 3.0e-77 292.4 257 58.4
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.6e-75 286.6 258 58.9
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 3.7e-75 285.4 224 66.1
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 3.1e-74 282.3 258 57.0
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.0e-72 277.3 258 58.1
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.7e-72 276.6 279 54.8
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 3.2e-71 272.3 258 53.9
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 7.2e-71 271.2 351 46.7
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 2.1e-70 269.6 260 56.5
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 4.6e-70 268.5 260 57.3
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.7e-69 264.6 244 58.6
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 8.7e-69 264.2 217 63.1
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 1.6e-67 260.0 205 64.4
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 5.3e-66 255.0 258 52.3
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 2.6e-60 236.1 232 52.2
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 3.6e-54 215.7 203 54.2
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 2.6e-44 183.0 215 51.2
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 7.5e-44 181.4 128 68.8
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.1e-42 175.6 129 68.2
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 5.2e-37 158.7 229 38.4
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 9.8e-36 154.5 223 39.5
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 4.2e-31 139.0 268 32.1
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 5.5e-31 138.7 119 58.0
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-30 137.5 74 85.1
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.0e-29 132.9 106 60.4
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 1.9e-23 113.6 135 47.4
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 3.2e-18 96.3 191 34.6
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.2e-17 94.4 47 87.2
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 6.2e-14 82.0 67 56.7
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.6e-09 67.4 42 71.4


User provided reference genes

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