Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 0.0e+00 1770.4 898 100.0
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 8.3e-283 977.2 902 59.5
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 7.0e-274 947.6 917 56.8
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 2.0e-273 946.0 915 56.8
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 2.8e-270 935.6 926 55.3
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 8.4e-219 764.6 930 48.3
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 9.1e-181 638.3 975 43.1
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 8.5e-179 631.7 914 43.3
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 5.9e-172 609.0 958 40.9
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 3.0e-160 570.1 944 40.7
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 1.2e-159 568.2 928 41.8
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 2.6e-159 567.0 933 40.8
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 2.7e-156 557.0 928 40.8
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 1.0e-155 555.1 921 40.8
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 6.6e-155 552.4 970 38.8
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 4.3e-154 549.7 944 39.4
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.0e-152 545.0 894 40.3
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 1.4e-152 544.7 919 40.0
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 3.9e-147 526.6 978 38.5
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 8.6e-147 525.4 974 38.9
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 6.8e-144 515.8 935 37.2
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 3.4e-143 513.5 938 38.2
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 9.8e-143 511.9 966 38.6
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 3.0e-139 500.4 951 38.1
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 5.6e-138 496.1 964 38.9
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 4.0e-136 490.0 966 36.6
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 1.2e-135 488.4 975 37.5
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 1.1e-133 481.9 958 37.8
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 4.1e-133 479.9 944 36.7
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 3.0e-131 473.8 974 35.8
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 3.9e-131 473.4 962 37.4
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 6.6e-131 472.6 962 35.9
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 5.6e-130 469.5 957 36.6
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 3.6e-129 466.8 949 35.6
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 4.7e-129 466.5 978 37.0
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 1.1e-128 465.3 990 35.8
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 1.8e-128 464.5 924 36.6
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.4e-128 464.2 921 37.2
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 2.0e-127 461.1 1028 35.8
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 2.6e-127 460.7 968 36.7
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 3.8e-126 456.8 968 35.6
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.9e-126 456.4 975 35.5
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 8.4e-126 455.7 968 35.4
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.1e-125 452.6 965 35.3
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.2e-124 451.8 965 35.3
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.1e-124 451.1 969 36.3
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.7e-123 448.0 979 36.6
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 5.1e-123 446.4 972 35.8
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.2e-121 441.8 971 35.8
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 1.6e-121 441.4 949 35.3
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 1.8e-120 438.0 951 36.5
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 3.2e-117 427.2 957 35.2
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 9.3e-117 425.6 995 33.8
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 6.0e-116 422.9 996 33.7
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.2e-111 408.7 989 34.2
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.5e-111 408.3 903 35.4
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.8e-111 406.4 959 34.4
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 2.2e-110 404.4 857 37.3
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 4.9e-110 403.3 954 33.5
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 8.4e-110 402.5 942 33.5
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.4e-109 401.0 934 34.8
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 1.0e-107 395.6 985 33.8
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 6.7e-107 392.9 935 33.7
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.3e-105 388.7 752 37.9
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 2.1e-105 387.9 972 33.5
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 3.7e-105 387.1 989 33.6
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 4.8e-105 386.7 942 34.0
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 4.8e-105 386.7 936 32.5
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 1.1e-104 385.6 934 33.3
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.4e-104 385.2 746 36.7
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 5.3e-104 383.3 930 32.8
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 9.9e-103 379.0 943 32.3
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 1.4e-101 375.2 953 33.4
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 1.0e-99 369.0 948 31.9
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 1.3e-99 368.6 978 33.4
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 3.0e-99 367.5 955 33.2
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 1.5e-98 365.2 985 33.1
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 7.4e-98 362.8 942 31.8
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 7.4e-98 362.8 936 32.8
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.4e-96 357.8 838 33.7
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 5.3e-96 356.7 949 32.2
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 5.3e-96 356.7 944 31.2
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 7.6e-95 352.8 939 31.5
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 7.6e-95 352.8 940 32.0
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 2.2e-94 351.3 946 31.4
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.9e-94 350.9 968 32.0
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 3.8e-94 350.5 938 31.6
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 3.2e-93 347.4 939 31.4
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 2.7e-92 344.4 825 34.9
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 5.1e-91 340.1 854 32.0
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 5.1e-91 340.1 854 32.0
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 5.1e-91 340.1 937 31.8
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 1.1e-90 339.0 953 30.5
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 1.1e-82 312.4 525 40.8
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 6.3e-81 306.6 956 29.9
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 7.7e-79 299.7 934 29.6
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 8.5e-78 296.2 830 29.9
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 1.1e-77 295.8 801 30.5
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.9e-77 295.0 479 39.9
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 2.5e-77 294.7 592 35.1
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 3.9e-75 287.3 888 29.6
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 3.1e-72 277.7 397 45.8
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 6.1e-68 263.5 934 28.4
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.4e-64 251.5 430 42.6
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 3.2e-61 241.1 1053 24.1
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 4.2e-61 240.7 607 33.8
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 5.2e-59 233.8 330 44.5
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 1.8e-56 225.3 936 27.9
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 2.7e-55 221.5 325 41.2
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 5.7e-50 203.8 605 28.6
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 4.7e-44 184.1 899 25.3
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 8.0e-44 183.3 204 53.4
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.5e-42 179.1 254 44.9
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 7.8e-39 166.8 895 25.5
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 1.7e-38 165.6 334 38.0
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 9.5e-37 159.8 314 36.3
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 6.1e-36 157.1 329 35.9
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 8.6e-30 136.7 199 47.2
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 8.0e-28 130.2 371 31.8
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 3.1e-27 128.3 951 24.1
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 8.9e-19 100.1 119 48.7
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 1.7e-17 95.9 295 32.2
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 4.2e-08 64.7 86 43.0
Lju188P3T29 Lonicera japonica HOM05D005720 ORTHO05D006984 9.2e-08 63.5 89 43.8
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 1.6e-07 62.8 141 36.2


User provided reference genes

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