Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 5.3e-154 547.7 295 100.0
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.2e-98 362.5 308 64.3
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 7.0e-98 361.3 312 62.2
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.3e-96 357.1 308 63.3
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 1.1e-95 354.0 308 62.3
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 1.2e-94 350.5 308 61.7
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 3.6e-94 349.0 312 60.6
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 2.0e-92 343.2 308 60.1
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.4e-92 342.4 309 60.5
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.3e-91 340.5 308 60.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.7e-91 340.1 309 58.9
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.4e-91 338.2 311 58.5
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 8.3e-91 337.8 321 57.0
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.9e-90 336.7 311 58.2
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.9e-90 336.7 311 58.2
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.1e-90 335.5 310 58.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 5.4e-90 335.1 307 58.6
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 7.1e-90 334.7 308 58.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 9.2e-90 334.3 311 57.9
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.6e-89 332.0 310 58.1
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 7.8e-89 331.3 253 68.4
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.3e-88 330.5 309 57.9
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 5.1e-88 328.6 319 57.1
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.1e-87 327.4 308 58.8
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.5e-87 327.0 308 58.4
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.5e-87 327.0 308 57.8
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.9e-87 326.6 308 57.5
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.5e-87 326.2 308 58.4
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 2.5e-87 326.2 308 57.8
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 5.6e-87 325.1 309 58.3
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 5.6e-87 325.1 308 58.4
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.2e-86 323.9 309 57.6
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.6e-86 322.4 307 56.7
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 1.8e-85 320.1 308 56.5
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.8e-85 320.1 308 56.2
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 2.4e-85 319.7 309 57.0
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.2e-85 318.5 309 57.6
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 6.8e-85 318.2 309 56.3
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.2e-84 317.4 343 51.9
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.5e-84 317.0 307 56.0
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.0e-84 316.6 307 56.0
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.6e-84 316.2 308 55.8
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.6e-84 316.2 308 55.8
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.6e-84 316.2 308 57.5
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 4.4e-84 315.5 308 54.9
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 9.9e-84 314.3 308 54.5
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 9.9e-84 314.3 313 54.0
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.7e-83 313.5 309 55.3
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.9e-83 312.8 266 62.8
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.8e-83 312.4 307 56.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 6.4e-83 311.6 309 55.3
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 3.2e-82 309.3 313 53.7
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 3.2e-82 309.3 313 53.7
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 4.2e-82 308.9 313 53.7
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 4.2e-82 308.9 313 53.7
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 9.2e-82 307.8 309 57.0
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 9.2e-82 307.8 313 53.4
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.2e-81 307.4 313 53.4
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.6e-81 307.0 313 53.0
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.5e-81 305.8 307 55.7
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 6.0e-81 305.1 316 53.8
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 3.9e-80 302.4 309 52.4
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 3.9e-80 302.4 314 53.2
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 5.1e-80 302.0 308 51.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 6.6e-80 301.6 309 54.0
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 8.7e-80 301.2 308 51.3
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.9e-79 300.1 315 53.0
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.9e-79 300.1 310 53.2
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 2.5e-79 299.7 310 53.5
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 5.6e-79 298.5 308 54.5
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.2e-78 297.4 310 52.6
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.2e-78 297.4 308 50.3
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.1e-78 296.6 307 54.1
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 4.7e-78 295.4 309 51.8
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 4.7e-78 295.4 309 53.1
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 8.1e-78 294.7 313 51.4
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 5.3e-77 292.0 308 53.2
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.0e-77 291.2 308 53.2
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.0e-76 290.0 310 52.9
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.0e-76 290.0 308 50.0
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 2.2e-75 286.6 312 51.3
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 3.8e-75 285.8 309 52.8
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.4e-74 283.9 308 51.9
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.4e-74 283.1 204 69.6
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 4.2e-74 282.3 306 55.9
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 2.1e-73 280.0 308 51.9
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.7e-73 279.6 309 52.8
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.7e-72 276.9 310 53.5
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.3e-72 276.6 310 51.9
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 1.1e-71 274.2 297 50.8
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-71 274.2 203 68.5
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 6.2e-70 268.5 309 52.1
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 1.3e-67 260.8 272 51.5
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 7.9e-65 251.5 257 52.1
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.0e-64 251.1 308 50.0
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 3.0e-64 249.6 278 56.5
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.7e-64 248.4 259 52.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 9.6e-63 244.6 311 47.9
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 6.4e-59 231.9 309 45.6
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.8e-56 223.8 276 48.2
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.7e-51 207.2 275 45.5
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 6.1e-49 198.7 310 41.3
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 2.4e-45 186.8 230 47.4
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.3e-43 181.0 269 45.4
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 6.5e-43 178.7 273 43.6
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 5.5e-42 175.6 300 41.3
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 7.2e-42 175.3 185 54.6
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 7.2e-42 175.3 139 66.9
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.7e-41 173.3 270 40.4
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 9.7e-39 164.9 300 39.0
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 4.8e-38 162.5 134 61.9
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 4.8e-38 162.5 119 68.9
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 1.8e-37 160.6 261 39.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 6.9e-37 158.7 295 39.3
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 2.7e-33 146.7 181 50.3
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 6.7e-32 142.1 127 59.8
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 5.7e-31 139.0 270 37.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.4e-29 134.4 176 44.9
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 7.0e-29 132.1 176 44.3
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 6.5e-27 125.6 117 59.8
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.1e-25 120.6 110 59.1
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.7e-24 115.5 297 32.3
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.0e-23 114.0 158 46.2
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 9.7e-23 111.7 120 50.8
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.8e-21 107.5 97 50.5
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-16 91.3 149 41.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 4.8e-14 82.8 94 50.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.3e-14 82.0 66 56.1
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 4.1e-13 79.7 94 51.1
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 3.5e-12 76.6 135 41.5
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.1e-10 71.6 96 46.9
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.2e-06 57.4 77 45.5


User provided reference genes

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