Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold191G40486 Striga asiatica HOM05D017394 ORTHO05D001737 4.1e-90 334.7 172 100.0
SGA_v2.0_scaffold37G14762 Striga asiatica HOM05D017394 ORTHO05D001737 5.3e-45 184.9 175 64.6
SGA_v2.0_scaffold113G31714 Striga asiatica HOM05D017394 ORTHO05D001737 2.0e-44 183.0 175 65.1
SGA_v2.0_scaffold142G35665 Striga asiatica HOM05D017394 ORTHO05D001737 3.9e-40 168.7 177 59.9
SGA_v2.0_scaffold332G48948 Striga asiatica HOM05D017394 ORTHO05D001737 7.1e-34 147.9 107 74.8
SGA_v2.0_scaffold50G18424 Striga asiatica HOM05D017394 ORTHO05D001737 6.7e-24 114.8 97 70.1
SGA_v2.0_scaffold143G35747 Striga asiatica HOM05D017394 ORTHO05D001737 6.3e-22 108.2 143 51.7
SGA_v2.0_scaffold288G47234 Striga asiatica HOM05D017394 ORTHO05D001737 3.0e-16 89.4 184 45.1
unitig_0.g2758 Utricularia gibba HOM05D001878 ORTHO05D001737 8.5e-11 71.2 92 53.3
unitig_748.g7119 Utricularia gibba HOM05D001878 ORTHO05D001737 2.1e-09 66.6 95 50.5
Oeu037430.1 Olea europaea HOM05D001878 ORTHO05D001737 3.6e-09 65.9 72 56.9
Oeu019262.1 Olea europaea HOM05D001878 ORTHO05D001737 8.0e-09 64.7 72 56.9
Oeu026349.1 Olea europaea HOM05D001878 ORTHO05D001737 3.0e-08 62.8 69 55.1
Cc02_g25370 Coffea canephora HOM05D001878 ORTHO05D001737 8.8e-08 61.2 63 52.4
Lsat_1_v5_gn_4_40001 Lactuca sativa HOM05D001878 ORTHO05D001737 2.0e-07 60.1 65 49.2
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 5.7e-07 58.5 77 48.1
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 5.7e-07 58.5 77 48.1
SGA_v2.0_scaffold143G35746 Striga asiatica HOM05D056464 ORTHO05D001737 7.4e-07 58.2 64 56.2
MSTRG.4940 Avicennia marina HOM05D001878 ORTHO05D001737 9.7e-07 57.8 72 52.8
COL.COLO4_18392 Corchorus olitorius HOM05D001878 ORTHO05D001737 9.7e-07 57.8 126 35.7
Glyma.18G248000 Glycine max HOM05D001878 ORTHO05D001737 9.7e-07 57.8 61 50.8
Potri.002G139500 Populus trichocarpa HOM05D001878 ORTHO05D001737 1.3e-06 57.4 128 35.9
Phvul.008G049300 Phaseolus vulgaris HOM05D001878 ORTHO05D001737 2.2e-06 56.6 61 49.2
VMungo1383G0933 Vigna mungo HOM05D001878 ORTHO05D001737 2.2e-06 56.6 61 50.8
Potri.014G051200 Populus trichocarpa HOM05D001878 ORTHO05D001737 3.7e-06 55.8 124 36.3
CAN.G756.42 Capsicum annuum HOM05D001878 ORTHO05D001737 4.8e-06 55.5 55 50.9
Nitab4.5_0000563g0150 Nicotiana tabacum HOM05D001878 ORTHO05D001737 4.8e-06 55.5 45 60.0
Nitab4.5_0011684g0010 Nicotiana tabacum HOM05D001878 ORTHO05D001737 4.8e-06 55.5 45 60.0
Gohir.A08G139800 Gossypium hirsutum HOM05D001878 ORTHO05D001737 6.3e-06 55.1 170 31.2
Glyma.09G245300 Glycine max HOM05D001878 ORTHO05D001737 8.2e-06 54.7 61 47.5
Gohir.D08G160800 Gossypium hirsutum HOM05D001878 ORTHO05D001737 8.2e-06 54.7 183 30.6
Gorai.004G167100 Gossypium raimondii HOM05D001878 ORTHO05D001737 8.2e-06 54.7 183 30.6
Lsat_1_v5_gn_1_84200 Lactuca sativa HOM05D001878 ORTHO05D001737 8.2e-06 54.7 65 47.7
Rhsim01G0141600 Rhododendron simsii HOM05D001878 ORTHO05D001737 8.2e-06 54.7 127 37.0
Sabra14G0036200 Salix brachista HOM05D001878 ORTHO05D001737 8.2e-06 54.7 124 35.5
Sabra14G0038300 Salix brachista HOM05D001878 ORTHO05D001737 8.2e-06 54.7 124 35.5


User provided reference genes

Program Settings