Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold190G40405 Striga asiatica HOM05D002727 ORTHO05D002856 3.6e-94 348.2 170 100.0
SGA_v2.0_scaffold172G38950 Striga asiatica HOM05D002727 ORTHO05D002856 1.6e-49 199.9 152 72.4
SGA_v2.0_scaffold122G33196 Striga asiatica HOM05D002727 ORTHO05D002856 1.5e-47 193.4 109 90.8
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 3.1e-45 185.7 108 87.0
SGA_v2.0_scaffold180G39653 Striga asiatica HOM05D000089 ORTHO05D000104 1.5e-44 183.3 108 88.0
SGA_v2.0_scaffold52G19078 Striga asiatica HOM05D002727 ORTHO05D002856 3.2e-42 175.6 108 86.1
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 2.1e-30 136.3 91 82.4
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 1.1e-29 134.0 111 64.9
SGA_v2.0_scaffold495G52461 Striga asiatica HOM05D002727 ORTHO05D002856 1.5e-28 130.2 102 73.5
SGA_v2.0_scaffold85G26696 Striga asiatica HOM05D002727 ORTHO05D002856 4.1e-26 122.1 98 74.5
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 4.3e-23 112.1 61 96.7
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 4.7e-22 108.6 112 55.4
SGA_v2.0_scaffold44G16740 Striga asiatica HOM05D002727 ORTHO05D002856 2.0e-20 103.2 62 87.1
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 7.6e-20 101.3 108 53.7
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 7.6e-20 101.3 108 51.9
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 7.6e-20 101.3 108 51.9
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 7.6e-20 101.3 108 51.9
SGA_v2.0_scaffold76G25158 Striga asiatica HOM05D002727 ORTHO05D002856 2.9e-19 99.4 62 85.5
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 1.2e-17 94.0 109 51.4
unitig_27.g25263 Utricularia gibba HOM05D002727 ORTHO05D002856 4.6e-17 92.0 109 47.7
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 1.9e-15 86.7 109 47.7
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 9.9e-12 74.3 118 42.4
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 1.7e-11 73.6 118 37.3
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 8.4e-11 71.2 116 40.5
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 8.4e-11 71.2 116 40.5
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 3.2e-10 69.3 111 39.6
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 4.2e-10 68.9 115 39.1
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 4.2e-10 68.9 111 39.6
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 5.4e-10 68.6 116 37.9
unitig_26.g9074 Utricularia gibba HOM05D002727 ORTHO05D002856 5.4e-10 68.6 69 56.5
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 5.4e-10 68.6 115 38.3
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 7.1e-10 68.2 113 39.8
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 1.2e-09 67.4 118 36.4
Atru.chr11.374 Acer truncatum HOM05D002727 ORTHO05D002856 1.6e-09 67.0 111 40.5
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 1.6e-09 67.0 113 35.4
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 2.1e-09 66.6 111 36.9
SGA_v2.0_scaffold10G05490 Striga asiatica HOM05D002727 ORTHO05D002856 2.1e-09 66.6 44 88.6
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 2.7e-09 66.2 113 34.5
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 2.7e-09 66.2 116 37.9
ECA233G4969 Erigeron canadensis HOM05D002727 ORTHO05D002856 2.7e-09 66.2 119 40.3
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 7.9e-09 64.7 111 38.7
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 7.9e-09 64.7 112 34.8
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 7.9e-09 64.7 71 46.5
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 1.3e-08 63.9 114 38.6
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 1.3e-08 63.9 120 32.5
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 1.3e-08 63.9 109 36.7
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 1.3e-08 63.9 112 40.2
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 1.8e-08 63.5 112 39.3
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 2.3e-08 63.2 108 35.2
unitig_26.g9076 Utricularia gibba HOM05D002727 ORTHO05D002856 3.0e-08 62.8 78 47.4
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 3.9e-08 62.4 113 40.7
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 3.9e-08 62.4 112 37.5
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 5.1e-08 62.0 112 40.2
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 6.7e-08 61.6 111 37.8
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 6.7e-08 61.6 113 38.9
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 6.7e-08 61.6 108 33.3
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 8.7e-08 61.2 116 36.2
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 1.1e-07 60.8 113 38.1
QL02p071341 Quercus lobata HOM05D002727 ORTHO05D002856 1.1e-07 60.8 109 34.9
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 1.5e-07 60.5 117 34.2
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.5e-07 60.5 117 33.3
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 1.9e-07 60.1 115 33.0
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 1.9e-07 60.1 127 37.0
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 3.3e-07 59.3 112 35.7
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 3.3e-07 59.3 126 33.3
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 3.3e-07 59.3 111 32.4
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 3.3e-07 59.3 111 33.3
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 4.3e-07 58.9 113 35.4
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 5.6e-07 58.5 112 37.5
PSO478G1911 Papaver somniferum HOM05D002727 ORTHO05D002856 5.6e-07 58.5 121 36.4
Thecc.02G279300 Theobroma cacao HOM05D002727 ORTHO05D002856 5.6e-07 58.5 111 35.1
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 7.4e-07 58.2 114 35.1
CANSAT01G3036 Cannabis sativa HOM05D002727 ORTHO05D002856 9.6e-07 57.8 121 38.0
Cfa008577 Carpinus fangiana HOM05D002727 ORTHO05D002856 1.3e-06 57.4 130 34.6
AUR62039553 Chenopodium quinoa HOM05D002727 ORTHO05D002856 1.3e-06 57.4 106 35.8
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 1.6e-06 57.0 119 33.6
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 1.6e-06 57.0 115 33.9
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 1.6e-06 57.0 110 33.6
Sc18g0004340 Simmondsia chinensis HOM05D002727 ORTHO05D002856 1.6e-06 57.0 120 35.8
Ah.02g128090 Amaranthus hybridus HOM05D002727 ORTHO05D002856 2.1e-06 56.6 110 38.2
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 2.1e-06 56.6 114 38.6
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 2.1e-06 56.6 117 35.9
CiPaw.06G012900 Carya illinoinensis HOM05D002727 ORTHO05D002856 2.8e-06 56.2 143 30.8
FAN06G1995 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.7e-06 55.8 119 36.1
Medtr5g044170 Medicago truncatula HOM05D002727 ORTHO05D002856 3.7e-06 55.8 125 33.6
TWI56G0192 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 3.7e-06 55.8 110 34.5
Dinv05150 Davidia involucrata HOM05D002727 ORTHO05D002856 4.8e-06 55.5 120 33.3
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 4.8e-06 55.5 117 35.0
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.2e-06 55.1 117 36.8
Glyma.09G119800 Glycine max HOM05D002727 ORTHO05D002856 6.2e-06 55.1 81 40.7
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 6.2e-06 55.1 115 33.9
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 8.1e-06 54.7 119 35.3
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.1e-06 54.7 119 35.3


User provided reference genes

Program Settings