Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 4.0e-165 584.7 298 100.0
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 3.0e-48 196.4 165 58.8
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 8.8e-48 194.9 165 58.8
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 1.2e-47 194.5 165 59.4
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 2.0e-47 193.7 165 59.4
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 3.4e-47 193.0 163 59.5
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 3.4e-47 193.0 163 59.5
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 58.9
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 58.9
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 59.5
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 59.5
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 58.9
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 59.5
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 4.4e-47 192.6 163 59.5
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 5.7e-47 192.2 165 58.8
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 5.7e-47 192.2 165 58.8
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 5.7e-47 192.2 163 58.9
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 5.7e-47 192.2 163 59.5
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 7.5e-47 191.8 163 58.3
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 7.5e-47 191.8 163 58.9
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 7.5e-47 191.8 163 60.1
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 9.8e-47 191.4 165 58.8
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 9.8e-47 191.4 163 58.9
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 9.8e-47 191.4 163 58.9
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 9.8e-47 191.4 163 58.9
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 1.3e-46 191.0 165 57.0
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 1.3e-46 191.0 163 58.9
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 1.3e-46 191.0 163 58.3
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 1.7e-46 190.7 163 58.9
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 1.7e-46 190.7 163 58.3
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 2.2e-46 190.3 163 58.3
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 2.8e-46 189.9 163 58.3
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 2.8e-46 189.9 163 58.3
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 2.8e-46 189.9 163 57.7
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 2.8e-46 189.9 163 59.5
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 2.8e-46 189.9 165 56.4
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 2.8e-46 189.9 163 58.3
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 2.8e-46 189.9 163 58.9
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 3.7e-46 189.5 163 57.1
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 3.7e-46 189.5 165 57.6
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 3.7e-46 189.5 163 58.3
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 3.7e-46 189.5 165 57.6
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 4.8e-46 189.1 164 57.3
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 4.8e-46 189.1 165 57.6
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 4.8e-46 189.1 163 58.9
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 4.8e-46 189.1 163 57.7
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 4.8e-46 189.1 163 57.7
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.1
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.7
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 58.3
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 57.7
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 58.3
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 6.3e-46 188.7 165 57.6
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 6.3e-46 188.7 165 57.6
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 58.9
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 6.3e-46 188.7 163 58.3
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 8.3e-46 188.3 163 57.1
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 8.3e-46 188.3 163 58.9
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 8.3e-46 188.3 163 58.3
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 8.3e-46 188.3 165 57.6
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 8.3e-46 188.3 165 57.6
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 8.3e-46 188.3 163 57.1
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 8.3e-46 188.3 166 57.2
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 1.1e-45 188.0 163 57.1
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 1.1e-45 188.0 163 57.7
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 1.1e-45 188.0 165 56.4
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 1.1e-45 188.0 165 56.4
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 1.1e-45 188.0 165 56.4
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 1.1e-45 188.0 163 57.7
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 57.7
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 57.1
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 57.7
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 57.7
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 58.3
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 58.3
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 1.4e-45 187.6 163 57.7
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 1.8e-45 187.2 163 57.7
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 1.8e-45 187.2 163 57.7
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 2.4e-45 186.8 163 56.4
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 2.4e-45 186.8 163 58.3
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 2.4e-45 186.8 163 57.7
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 2.4e-45 186.8 156 59.0
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 3.1e-45 186.4 163 56.4
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 3.1e-45 186.4 163 57.1
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 3.1e-45 186.4 163 57.1
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 3.1e-45 186.4 165 56.4
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.7
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.1
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 58.3
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.1
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.1
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.1
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.1
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 4.1e-45 186.0 163 57.1
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 5.4e-45 185.7 163 56.4
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 5.4e-45 185.7 165 56.4
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 5.4e-45 185.7 165 57.0
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 5.4e-45 185.7 163 56.4
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 5.4e-45 185.7 163 57.7
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 5.4e-45 185.7 163 57.7
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 7.0e-45 185.3 165 55.2
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 57.1
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 55.8
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 55.8
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 55.8
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 55.8
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 57.1
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 7.0e-45 185.3 163 56.4
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 1.2e-44 184.5 163 56.4
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 1.2e-44 184.5 163 57.1
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 1.6e-44 184.1 163 56.4
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 1.6e-44 184.1 163 57.1
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 1.6e-44 184.1 163 56.4
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 2.0e-44 183.7 165 55.8
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 2.7e-44 183.3 165 56.4
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 3.5e-44 183.0 163 56.4
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 4.5e-44 182.6 163 55.8
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 5.9e-44 182.2 163 55.8
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 7.7e-44 181.8 163 56.4
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 7.7e-44 181.8 163 54.6
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 7.7e-44 181.8 163 55.8
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 1.7e-43 180.6 163 55.2
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 2.2e-43 180.3 163 55.8
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 2.2e-43 180.3 163 55.8
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 2.2e-43 180.3 163 55.8
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 2.9e-43 179.9 163 54.0
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 3.8e-43 179.5 163 54.0
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 5.0e-43 179.1 165 55.2
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 8.5e-43 178.3 163 54.6
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 1.1e-42 177.9 163 54.6
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 1.5e-42 177.6 163 54.6
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 1.9e-42 177.2 165 54.5
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 1.9e-42 177.2 157 58.0
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 1.6e-41 174.1 163 55.2
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 3.6e-41 172.9 163 53.4
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 4.7e-41 172.6 157 54.8
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.0e-40 171.4 157 55.4
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 3.0e-40 169.9 133 62.4
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 1.5e-39 167.5 153 54.9
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 1.8e-37 160.6 127 59.8
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 1.4e-21 107.8 156 41.7
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 4.1e-21 106.3 106 53.8
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 7.0e-21 105.5 106 53.8


User provided reference genes

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