Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 2.3e-105 385.6 192 100.0
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 1.6e-87 326.2 158 94.3
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 2.0e-85 319.3 158 91.1
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 4.2e-83 311.6 156 89.1
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 4.2e-83 311.6 156 89.1
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 2.7e-82 308.9 184 76.6
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 4.3e-80 301.6 158 85.4
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 2.0e-77 292.7 156 82.1
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 7.6e-77 290.8 155 81.3
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 2.2e-76 289.3 156 83.3
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 2.9e-76 288.9 156 81.4
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 3.8e-76 288.5 158 81.0
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 3.8e-76 288.5 156 81.4
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 6.4e-76 287.7 156 81.4
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 8.4e-76 287.3 156 82.7
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 1.4e-75 286.6 155 80.6
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 1.4e-75 286.6 156 82.1
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 2.4e-75 285.8 156 80.1
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 5.5e-75 284.6 156 81.4
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 7.1e-75 284.3 153 83.0
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 9.3e-75 283.9 158 79.1
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 1.2e-74 283.5 153 82.4
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 1.2e-74 283.5 156 79.5
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 1.6e-74 283.1 153 82.4
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 1.6e-74 283.1 153 82.4
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 2.1e-74 282.7 155 80.6
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 2.7e-74 282.3 155 79.4
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 2.7e-74 282.3 154 81.8
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 3.5e-74 282.0 153 82.4
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 3.5e-74 282.0 154 80.5
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 3.5e-74 282.0 155 80.0
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 4.6e-74 281.6 153 81.7
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 6.0e-74 281.2 154 80.5
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 7.9e-74 280.8 153 81.0
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 7.9e-74 280.8 155 78.7
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 1.0e-73 280.4 153 82.4
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 1.0e-73 280.4 153 82.4
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 1.0e-73 280.4 159 78.0
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 1.3e-73 280.0 157 79.6
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 1.8e-73 279.6 155 78.7
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 2.3e-73 279.3 159 78.6
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 3.0e-73 278.9 156 78.8
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 8.7e-73 277.3 153 80.4
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 8.7e-73 277.3 153 80.4
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 8.7e-73 277.3 153 80.4
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 8.7e-73 277.3 156 76.9
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 8.7e-73 277.3 153 81.0
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 1.1e-72 276.9 153 80.4
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 1.1e-72 276.9 156 78.8
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 1.5e-72 276.6 154 76.6
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 1.5e-72 276.6 159 77.4
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 1.5e-72 276.6 153 79.7
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 1.5e-72 276.6 153 79.7
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 1.9e-72 276.2 155 78.7
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 1.9e-72 276.2 159 77.4
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 3.3e-72 275.4 156 76.9
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 3.3e-72 275.4 156 76.9
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.6e-72 274.6 156 76.9
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 5.6e-72 274.6 156 76.9
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 7.4e-72 274.2 154 79.9
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 9.6e-72 273.9 156 77.6
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 1.3e-71 273.5 158 76.6
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 1.3e-71 273.5 155 78.7
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 1.6e-71 273.1 156 75.6
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 2.8e-71 272.3 155 78.1
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 3.7e-71 271.9 156 78.8
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 4.8e-71 271.6 153 77.1
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 4.8e-71 271.6 156 78.8
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 6.2e-71 271.2 156 77.6
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 6.2e-71 271.2 153 77.8
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 1.4e-70 270.0 158 76.6
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 1.4e-70 270.0 156 75.0
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 1.8e-70 269.6 148 79.1
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 1.8e-70 269.6 152 76.3
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 2.4e-70 269.2 156 79.5
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 3.1e-70 268.9 152 78.3
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 3.1e-70 268.9 156 75.0
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 3.1e-70 268.9 156 76.3
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 3.1e-70 268.9 156 78.8
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 1.5e-69 266.5 156 76.9
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 5.8e-69 264.6 156 75.0
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 7.6e-69 264.2 156 72.4
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 1.0e-68 263.8 155 72.9
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 2.2e-68 262.7 166 71.7
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 2.9e-68 262.3 156 73.1
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 6.5e-68 261.2 130 86.9
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 6.5e-68 261.2 126 89.7
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 4.2e-67 258.5 129 86.8
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.3e-65 252.7 158 71.5
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.3e-65 252.7 163 72.4
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 2.3e-65 252.7 154 75.3
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 5.1e-65 251.5 149 76.5
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 6.7e-65 251.1 119 92.4
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 1.9e-64 249.6 126 86.5
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 3.3e-64 248.8 149 72.5
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 4.3e-64 248.4 153 72.5
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 6.3e-63 244.6 163 69.9
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 6.3e-63 244.6 153 71.9
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 4.3e-56 221.9 157 67.5
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 1.3e-55 220.3 122 80.3
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 1.4e-54 216.9 119 79.0
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 6.9e-54 214.5 120 77.5
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 1.2e-53 213.8 118 81.4
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 1.0e-52 210.7 152 61.2
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 1.4e-51 206.8 120 78.3
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 9.4e-51 204.1 151 57.6
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 2.1e-50 203.0 155 61.3
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 7.9e-50 201.1 124 73.4
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 2.3e-49 199.5 113 80.5
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 6.3e-47 191.4 96 85.4
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 9.1e-46 187.6 112 76.8
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 2.0e-45 186.4 151 55.0
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 6.5e-44 181.4 159 51.6
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 6.5e-44 181.4 129 65.1
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 4.2e-43 178.7 93 82.8
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 3.9e-41 172.2 100 77.0
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 5.7e-40 168.3 104 67.3
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 2.2e-39 166.4 93 80.6
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 6.3e-39 164.9 155 52.3
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 8.5e-36 154.5 82 84.1
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.0e-33 146.0 80 82.5
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 4.8e-23 112.1 71 71.8
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.7e-20 103.6 58 72.4
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 2.5e-19 99.8 46 87.0
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 2.3e-17 93.2 147 35.4
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 2.6e-16 89.7 111 43.2
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 9.5e-11 71.2 113 39.8
PRCOL_00004481 Prasinoderma coloniale HOM05D006359 ORTHO05D007871 3.4e-08 62.8 125 34.4
VMungo1383G0392 Vigna mungo HOM05D006359 ORTHO05D007871 1.9e-06 57.0 28 89.3


User provided reference genes

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