Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.9e-167 592.4 306 100.0
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 9.0e-72 274.6 247 63.2
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 4.2e-69 265.8 242 60.7
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 1.2e-68 264.2 243 62.1
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.4e-53 214.2 245 52.7
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.9e-53 213.8 246 50.8
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 1.6e-52 210.7 217 58.1
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 3.6e-52 209.5 215 54.9
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 6.1e-52 208.8 252 49.2
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 1.4e-51 207.6 243 51.9
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 1.8e-51 207.2 247 49.8
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 3.9e-51 206.1 206 57.3
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.0e-50 203.8 246 50.0
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 4.3e-50 202.6 217 54.4
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 5.7e-50 202.2 290 44.5
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 7.4e-50 201.8 239 49.4
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 9.7e-50 201.4 246 54.1
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 9.7e-50 201.4 240 52.5
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-49 201.1 250 49.6
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-49 201.1 250 49.6
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 1.7e-49 200.7 224 53.1
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.7e-49 200.7 250 49.6
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 2.2e-49 200.3 250 49.6
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 6.3e-49 198.7 203 53.7
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.1e-48 198.0 234 50.9
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.1e-48 198.0 234 50.9
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 1.8e-48 197.2 168 64.9
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.4e-48 196.8 247 50.2
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 3.1e-48 196.4 219 53.9
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 3.1e-48 196.4 234 50.4
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 6.9e-48 195.3 256 48.8
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 6.9e-48 195.3 256 48.4
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 9.1e-48 194.9 233 51.9
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 1.5e-47 194.1 200 55.0
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 2.6e-47 193.4 249 49.4
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 2.6e-47 193.4 206 54.9
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 2.6e-47 193.4 194 57.2
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 3.4e-47 193.0 253 47.8
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 3.4e-47 193.0 253 47.8
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 4.5e-47 192.6 241 51.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 7.7e-47 191.8 239 49.8
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 2.2e-46 190.3 244 49.6
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 2.2e-46 190.3 239 49.4
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 2.9e-46 189.9 249 48.2
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 6.5e-46 188.7 213 54.0
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.4e-45 187.6 250 50.0
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.5e-45 186.8 208 51.9
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 3.2e-45 186.4 221 53.4
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 5.5e-45 185.7 230 50.0
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 9.4e-45 184.9 209 51.2
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 9.4e-45 184.9 286 43.7
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.2e-44 184.5 245 49.4
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 1.6e-44 184.1 202 54.0
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 2.1e-44 183.7 219 48.4
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 2.1e-44 183.7 197 54.8
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 6.1e-44 182.2 174 59.2
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 6.1e-44 182.2 241 49.8
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 6.1e-44 182.2 208 51.4
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 1.0e-43 181.4 243 49.4
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.0e-43 181.4 243 50.6
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 3.0e-43 179.9 244 50.0
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 6.7e-43 178.7 237 47.3
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 6.7e-43 178.7 222 50.9
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 8.8e-43 178.3 243 50.2
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.5e-42 177.6 202 52.0
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.5e-42 177.6 255 45.1
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 2.0e-42 177.2 208 51.0
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 2.6e-42 176.8 239 47.7
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 2.6e-42 176.8 215 49.3
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 4.4e-42 176.0 243 47.7
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 4.4e-42 176.0 250 45.2
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 1.3e-41 174.5 273 45.1
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 1.3e-41 174.5 202 52.5
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 2.8e-41 173.3 230 48.7
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 2.8e-41 173.3 189 54.5
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 3.7e-41 172.9 218 49.1
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.7e-41 172.9 208 51.0
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 6.3e-41 172.2 227 48.0
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.4e-40 171.0 171 55.0
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.8e-40 170.6 134 61.2
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 1.5e-39 167.5 253 43.5
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 7.7e-39 165.2 194 52.1
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 1.3e-38 164.5 233 47.6
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 1.3e-38 164.5 202 49.0
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.1e-37 161.4 286 42.7
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 2.5e-37 160.2 186 48.4
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 4.2e-37 159.5 193 49.2
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 1.6e-36 157.5 195 51.8
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 4.7e-36 156.0 252 42.1
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 8.0e-36 155.2 193 49.2
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.4e-35 154.5 114 67.5
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 4.4e-34 149.4 108 67.6
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 6.3e-33 145.6 244 39.8
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 8.2e-33 145.2 214 44.9
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 4.1e-32 142.9 231 43.3
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 1.2e-31 141.4 217 43.3
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 5.0e-30 136.0 215 44.2
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 8.5e-30 135.2 170 49.4
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 2.5e-29 133.7 141 51.8
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 2.6e-26 123.6 268 36.2
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.8e-24 117.5 188 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 2.7e-23 113.6 173 39.9
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.1e-21 108.2 133 46.6
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 1.6e-20 104.4 201 36.8
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 5.7e-18 95.9 222 33.3
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 1.6e-15 87.8 180 40.0
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.0e-14 85.1 77 55.8
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 2.3e-14 84.0 110 51.8
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 1.1e-13 81.6 110 50.9
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 1.5e-13 81.3 154 36.4
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 1.2e-12 78.2 50 70.0
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 2.0e-10 70.9 100 48.0
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 1.3e-09 68.2 81 44.4
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 2.2e-09 67.4 43 74.4
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 2.9e-09 67.0 144 34.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 2.4e-08 63.9 51 60.8
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 7.0e-08 62.4 142 37.3
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 6.6e-06 55.8 90 43.3


User provided reference genes

Program Settings