Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 0.0e+00 1913.3 971 100.0
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 5.4e-304 1047.7 1010 60.5
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 3.1e-174 616.7 1081 41.6
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 2.5e-152 543.9 1133 37.2
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 8.7e-137 492.3 954 39.2
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 1.3e-135 488.4 954 38.9
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 2.2e-116 424.5 1128 33.2
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 3.3e-75 287.7 1015 30.7
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 4.4e-72 277.3 1138 28.9
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 3.3e-67 261.2 1010 29.1
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.2e-56 226.1 1059 28.3
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 9.9e-56 223.0 1007 27.9
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 1.4e-54 219.2 963 27.3
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 9.2e-54 216.5 1000 28.1
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.7e-52 212.2 964 28.2
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 5.1e-52 210.7 1076 26.4
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 4.3e-51 207.6 972 28.8
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 1.2e-50 206.1 972 28.4
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 6.8e-49 200.3 1002 27.9
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.3e-44 186.0 1100 26.7
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 1.7e-44 185.7 1026 27.1
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 8.7e-44 183.3 1041 27.1
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 1.1e-43 183.0 1010 26.5
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 4.8e-42 177.6 1016 25.9
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 8.1e-42 176.8 1141 25.8
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 9.0e-41 173.3 975 26.7
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 2.0e-40 172.2 1076 26.4
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 4.4e-40 171.0 965 25.9
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 7.6e-40 170.2 977 26.0
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.7e-39 169.1 877 26.1
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 4.9e-39 167.5 1137 24.6
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 4.9e-39 167.5 980 26.4
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.2e-37 162.9 1055 26.2
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 3.9e-36 157.9 995 25.6
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 1.6e-34 152.5 1126 25.0
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 2.1e-34 152.1 1068 24.3
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 4.8e-34 151.0 1025 25.5
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 4.8e-34 151.0 935 25.1
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 6.2e-34 150.6 1030 25.4
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 6.9e-33 147.1 975 24.7
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.6e-32 145.2 1175 24.2
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 7.6e-32 143.7 981 26.5
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 1.3e-31 142.9 1003 25.8
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 3.8e-31 141.4 1057 24.5
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 6.4e-31 140.6 1155 24.0
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 8.4e-31 140.2 948 26.8
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.4e-30 138.7 1057 23.9
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 5.4e-30 137.5 766 26.4
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.2e-29 136.3 983 25.5
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.6e-29 136.0 988 25.2
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.1e-29 135.6 985 25.7
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 6.0e-29 134.0 1119 24.8
Oeu029332.2 Olea europaea HOM05D006657 ORTHO05D005964 6.7e-28 130.6 457 29.8
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 4.3e-27 127.9 164 43.9
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 2.8e-26 125.2 929 24.9
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 4.8e-26 124.4 976 24.7
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 6.2e-26 124.0 331 30.8
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 6.9e-25 120.6 542 25.6
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 2.0e-24 119.0 1084 23.4
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 2.6e-24 118.6 1024 24.8
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 7.6e-24 117.1 532 26.9
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 1.3e-23 116.3 1079 24.5
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 1.7e-23 115.9 266 34.6
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 2.2e-23 115.5 1005 22.6
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 8.4e-23 113.6 1031 24.2
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 3.2e-22 111.7 421 27.8
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 2.7e-21 108.6 930 23.7
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.7e-21 108.6 193 37.8
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 3.5e-21 108.2 214 34.1
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 6.0e-21 107.5 687 26.8
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 7.9e-21 107.1 1102 23.9
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 1.3e-20 106.3 888 23.2
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.8e-20 105.9 277 31.0
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 1.8e-20 105.9 406 26.6
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 3.0e-20 105.1 945 23.7
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 9.6e-19 100.1 1071 23.1
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 1.3e-18 99.8 484 25.8
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 1.3e-18 99.8 444 25.2
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 2.1e-18 99.0 470 25.5
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 5.3e-17 94.4 549 24.8
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 6.9e-17 94.0 540 24.3
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 6.9e-17 94.0 968 23.5
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.0e-16 92.4 205 33.7
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 2.6e-16 92.0 925 24.5
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 7.6e-16 90.5 1054 24.1
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 6.5e-15 87.4 387 26.9
Lj1A1029T62 Lonicera japonica HOM05D006657 ORTHO05D005964 4.2e-14 84.7 241 33.2
SGA_v2.0_scaffold18G08475 Striga asiatica HOM05D000039 ORTHO05D000815 9.3e-14 83.6 254 33.1
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 1.2e-13 83.2 374 25.1
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 1.6e-13 82.8 267 30.0
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 1.3e-12 79.7 411 24.3
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 1.8e-12 79.3 202 28.2
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 1.8e-12 79.3 362 28.2
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 2.3e-12 79.0 204 31.4
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 2.3e-12 79.0 360 28.1
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 5.1e-12 77.8 305 28.2
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 5.1e-12 77.8 305 28.2
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 5.1e-12 77.8 305 28.2
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 1.5e-11 76.3 212 27.8
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.5e-11 76.3 320 26.2
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.5e-11 76.3 320 26.2
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 1.5e-11 76.3 397 27.0
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 1.9e-11 75.9 886 23.8
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 3.3e-11 75.1 194 28.4
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 3.3e-11 75.1 210 30.0
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 7.4e-11 73.9 974 24.4
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 9.7e-11 73.6 473 24.9
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 1.3e-10 73.2 188 29.8
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 1.3e-10 73.2 400 25.8
Ah.07g204540 Amaranthus hybridus HOM05D006657 ORTHO05D005964 3.7e-10 71.6 532 24.6
CDE04G2546 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 3.7e-10 71.6 599 22.7
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 3.7e-10 71.6 286 27.6
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 4.8e-10 71.2 310 24.2
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 4.8e-10 71.2 310 24.2
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 8.2e-10 70.5 1011 21.9
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 1.4e-09 69.7 100 41.0
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 1.8e-09 69.3 200 27.0
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 2.4e-09 68.9 200 27.0
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 3.1e-09 68.6 201 28.9
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 4.1e-09 68.2 195 28.2
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 4.1e-09 68.2 195 28.2
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 6.9e-09 67.4 197 25.9
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 6.9e-09 67.4 200 27.5
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 6.9e-09 67.4 200 27.0
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 6.9e-09 67.4 200 27.0
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 6.9e-09 67.4 200 27.5
Sp5g12600 Schrenkiella parvula HOM05D009821 ORTHO05D005964 6.9e-09 67.4 205 31.2
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 1.2e-08 66.6 200 27.0
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 2.6e-08 65.5 220 25.9
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 4.5e-08 64.7 432 23.4
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 5.9e-08 64.3 235 25.5
C01p30840 Brassica napus HOM05D009821 ORTHO05D005964 7.7e-08 63.9 216 29.2
BolC1t03016H Brassica oleracea HOM05D009821 ORTHO05D005964 1.7e-07 62.8 216 27.8
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 6.5e-07 60.8 220 27.3
MD06G1124500 Malus domestica HOM05D013249 ORTHO05D011012 1.1e-06 60.1 391 22.8
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 1.9e-06 59.3 408 25.0
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 5.5e-06 57.8 325 21.8
Potri.002G230100 Populus trichocarpa HOM05D006657 ORTHO05D005964 7.2e-06 57.4 61 41.0


User provided reference genes

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