Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 3.7e-163 578.2 295 100.0
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.2e-142 510.0 295 88.1
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 6.3e-139 497.7 295 86.1
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 7.7e-137 490.7 295 83.4
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 2.5e-135 485.7 295 82.7
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 4.2e-135 485.0 295 81.4
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 5.5e-135 484.6 295 82.0
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.6e-134 483.0 295 81.7
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 3.6e-134 481.9 295 82.0
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.4e-133 479.9 295 80.7
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 2.3e-133 479.2 295 81.7
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 2.3e-133 479.2 295 83.1
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.6e-132 475.7 295 81.7
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 5.7e-132 474.6 299 82.3
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 9.7e-132 473.8 295 81.0
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 6.3e-131 471.1 297 80.5
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 1.2e-129 466.8 295 81.4
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 6.5e-128 461.1 297 80.5
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 1.5e-127 459.9 295 80.3
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 3.2e-127 458.8 303 79.2
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 9.4e-127 457.2 300 78.7
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.0e-126 454.1 302 78.1
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 8.0e-126 454.1 300 78.0
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-125 452.6 300 77.3
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-125 452.6 300 77.0
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-125 452.2 300 77.0
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 4.0e-125 451.8 300 77.0
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.0e-125 451.8 300 77.0
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 5.2e-125 451.4 303 77.2
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 5.2e-125 451.4 341 69.2
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 1.5e-124 449.9 305 76.4
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 4.4e-124 448.4 305 76.4
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 7.5e-124 447.6 298 76.5
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 9.8e-124 447.2 300 76.0
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.3e-123 446.8 301 76.4
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 6.3e-123 444.5 306 75.5
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 8.3e-123 444.1 274 82.5
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 2.4e-122 442.6 305 74.1
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 1.2e-121 440.3 331 72.2
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 1.2e-121 440.3 331 72.2
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 2.7e-121 439.1 312 75.0
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 3.5e-121 438.7 301 76.4
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 5.9e-121 438.0 300 75.0
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.7e-120 436.4 303 75.9
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.7e-120 436.4 303 75.9
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 2.3e-120 436.0 309 73.8
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 3.8e-120 435.3 294 76.5
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 3.8e-120 435.3 308 73.4
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 5.0e-120 434.9 302 76.2
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 5.0e-120 434.9 312 74.0
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 6.6e-120 434.5 301 75.7
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 8.6e-120 434.1 315 72.4
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 1.9e-119 433.0 300 75.7
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.5e-119 432.6 312 72.4
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 2.5e-119 432.6 305 72.5
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 5.5e-119 431.4 306 72.2
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 1.2e-118 430.3 271 78.6
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 2.8e-118 429.1 296 74.7
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 6.1e-118 427.9 299 72.9
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 8.0e-118 427.6 314 72.6
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.0e-117 427.2 310 74.2
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.0e-117 427.2 301 75.4
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.4e-117 426.8 271 77.1
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.4e-117 426.8 269 78.1
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.4e-117 426.8 306 70.6
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 1.8e-117 426.4 306 70.6
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 4.0e-117 425.2 306 70.3
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 5.2e-117 424.9 306 70.9
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 6.8e-117 424.5 306 70.6
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 6.8e-117 424.5 306 70.6
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 1.5e-116 423.3 306 70.6
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.0e-116 422.9 306 70.6
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 2.6e-116 422.5 302 74.8
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 70.6
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 69.9
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 4.4e-116 421.8 306 69.6
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 5.7e-116 421.4 271 76.4
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 3.7e-115 418.7 305 71.5
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 6.3e-115 417.9 307 69.7
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 6.3e-115 417.9 305 70.8
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 8.3e-115 417.5 285 76.1
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.8e-114 416.4 305 71.5
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 4.1e-114 415.2 307 71.0
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 4.5e-113 411.8 296 69.9
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.3e-112 410.2 335 64.8
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 1.2e-110 403.7 304 69.1
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.8e-110 402.5 314 68.5
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 1.4e-109 400.2 319 68.0
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 8.9e-109 397.5 271 73.4
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.2e-107 392.9 336 64.3
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 7.0e-106 387.9 278 73.0
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 8.6e-104 380.9 306 66.0
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 4.7e-102 375.2 297 68.4
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 3.2e-98 362.5 320 62.2
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 1.9e-95 353.2 309 61.8
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 5.2e-93 345.1 220 78.2
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 8.9e-93 344.4 272 66.9
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 3.5e-89 332.4 272 64.3
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.1e-85 320.9 233 74.7
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 1.3e-80 303.9 278 59.4
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 5.1e-80 302.0 237 67.9
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 5.6e-79 298.5 201 76.6
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.7e-73 279.6 254 61.0
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 7.8e-73 278.1 295 52.9
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 8.1e-70 268.1 209 69.9
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.0e-60 236.9 263 47.5
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 5.1e-56 222.2 265 45.7
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.4e-53 214.2 192 63.5
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 4.5e-52 209.1 312 40.7
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.0e-51 208.0 155 73.5
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 2.8e-46 189.9 296 37.2
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 4.5e-44 182.6 313 38.0
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 1.5e-39 167.5 237 41.4
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.3e-38 164.5 297 40.4
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.9e-34 150.6 115 68.7
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.4e-29 134.4 235 37.4
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.6e-28 130.2 88 75.0
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 1.2e-20 104.8 74 67.6
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.7e-17 93.6 93 57.0
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 6.1e-17 92.4 135 45.9
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 6.1e-17 92.4 78 61.5
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 5.0e-11 72.8 79 58.2
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 7.5e-07 58.9 57 45.6


User provided reference genes

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