Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 0.0e+00 1351.3 668 100.0
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 6.3e-288 993.8 672 72.9
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 1.8e-282 975.7 671 72.7
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 8.9e-274 946.8 671 71.4
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 4.4e-249 864.8 674 64.1
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 1.9e-247 859.4 647 65.7
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 3.2e-247 858.6 655 64.9
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 8.1e-243 844.0 653 64.0
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 5.3e-242 841.3 652 66.6
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 1.5e-241 839.7 653 64.0
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.0e-237 827.0 618 65.0
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 5.1e-237 824.7 641 63.3
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 5.6e-236 821.2 662 62.4
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.3e-235 820.1 657 62.6
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 2.8e-235 818.9 665 61.7
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 3.7e-235 818.5 650 63.1
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 3.1e-234 815.5 662 61.6
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 5.3e-234 814.7 663 61.5
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 2.6e-233 812.4 660 61.1
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 1.4e-231 806.6 664 60.8
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 5.5e-231 804.7 667 59.7
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 6.0e-230 801.2 668 62.1
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 5.6e-228 794.7 662 59.7
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 1.3e-227 793.5 655 60.2
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 1.4e-226 790.0 654 59.5
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 1.8e-226 789.6 661 59.9
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 4.0e-226 788.5 662 60.1
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 5.3e-226 788.1 649 59.5
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 4.5e-225 785.0 651 59.6
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 2.2e-224 782.7 663 59.4
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 4.9e-224 781.6 651 59.6
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.1e-223 780.4 651 59.4
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 1.9e-223 779.6 664 59.2
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 5.5e-223 778.1 670 59.1
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 9.3e-223 777.3 661 59.2
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 1.2e-222 776.9 664 58.7
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 2.1e-222 776.2 662 58.9
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 4.6e-222 775.0 661 59.6
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 6.7e-221 771.2 665 57.7
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 8.7e-221 770.8 667 57.7
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 4.3e-220 768.5 669 58.0
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 9.7e-220 767.3 663 59.9
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 1.3e-219 766.9 663 59.0
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 6.3e-219 764.6 660 58.0
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 9.0e-218 760.8 667 58.6
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 2.0e-217 759.6 696 55.7
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 8.5e-216 754.2 658 59.4
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 3.2e-215 752.3 667 57.6
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 2.7e-214 749.2 670 58.1
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 6.1e-214 748.0 668 56.9
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 1.0e-213 747.3 644 58.5
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.8e-213 746.5 746 51.7
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 6.7e-213 744.6 668 57.6
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 6.7e-213 744.6 665 58.3
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 6.7e-213 744.6 659 57.7
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 1.9e-212 743.0 668 57.9
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 7.4e-212 741.1 668 57.0
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 1.8e-210 736.5 680 56.6
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 4.1e-210 735.3 733 54.8
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 1.5e-209 733.4 702 54.7
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 5.9e-209 731.5 650 58.2
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 1.0e-208 730.7 670 57.0
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 3.8e-208 728.8 680 55.7
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 4.7e-206 721.8 664 55.3
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 1.0e-205 720.7 657 55.6
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 2.6e-204 716.1 689 54.0
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 8.2e-203 711.1 668 54.8
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 1.5e-201 706.8 670 54.6
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 5.9e-201 704.9 688 52.6
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 7.7e-201 704.5 667 54.7
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 2.5e-199 699.5 686 53.5
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 7.2e-199 698.0 686 53.5
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 2.1e-198 696.4 685 53.3
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 2.7e-198 696.0 686 53.4
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 1.4e-197 693.7 686 53.4
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 5.2e-197 691.8 695 52.5
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 5.9e-193 678.3 651 55.5
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 5.5e-191 671.8 512 66.4
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 3.1e-186 656.0 641 53.4
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 2.7e-185 652.9 516 64.3
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 1.7e-184 650.2 662 51.4
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 2.9e-184 649.4 674 50.4
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 3.6e-182 642.5 502 64.5
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 6.1e-182 641.7 656 52.9
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 8.0e-182 641.3 651 51.2
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 7.5e-180 634.8 470 67.4
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 2.0e-177 626.7 641 52.0
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 1.2e-174 617.5 664 51.2
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 3.6e-174 615.9 676 52.2
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 8.3e-171 604.7 656 50.0
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 1.5e-167 594.0 671 46.9
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 1.7e-163 580.5 657 49.2
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.7e-155 553.9 521 56.0
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 5.2e-149 532.3 533 54.6
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 1.9e-130 470.7 654 42.0
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 1.3e-128 464.5 651 39.0
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 9.0e-125 451.8 410 56.8
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 8.4e-115 418.7 633 39.0
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 6.1e-97 359.4 398 52.3
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 8.2e-86 322.4 241 64.3
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 2.4e-77 294.3 468 39.3
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.4e-72 278.5 518 36.1
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 8.0e-65 252.7 616 31.7
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 2.9e-46 191.0 233 42.1
Hma1.2p1_0078F.1_g039980 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 2.4e-45 188.0 147 59.2
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.6e-44 185.3 177 49.2
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.1e-37 162.5 414 31.4
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 6.6e-35 153.3 99 74.7
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 4.0e-32 144.1 87 79.3
AUR62038912 Chenopodium quinoa HOM05D006559 ORTHO05D008867 8.6e-27 126.3 231 34.2
Lj6A690T73 Lonicera japonica HOM05D006559 ORTHO05D008867 1.1e-26 125.9 92 59.8
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 1.1e-21 109.4 113 47.8
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 1.9e-21 108.6 95 60.0
MBI14_g17950_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D241410 1.3e-19 102.4 157 44.6
RcHm_v2.0_Chr3g0458131 Rosa chinensis HOM05D006559 ORTHO05D050582 1.9e-13 82.0 75 57.3
Potri.008G105850 Populus trichocarpa HOM05D006559 ORTHO05D050582 1.7e-11 75.5 65 53.8
BcaB04g20870 Brassica carinata HOM05D006559 ORTHO05D019951 2.5e-10 71.6 96 41.7
BcaC01g05501 Brassica carinata HOM05D006559 ORTHO05D019951 3.6e-09 67.8 98 41.8
RcHm_v2.0_Chr4g0425071 Rosa chinensis HOM05D006559 ORTHO05D343184 4.8e-09 67.4 87 44.8


User provided reference genes

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