Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 2.0e-188 662.1 313 100.0
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 1.6e-116 423.3 271 77.9
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 3.6e-100 369.0 270 65.9
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 1.8e-96 356.7 293 60.4
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 3.1e-96 355.9 271 62.7
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 4.5e-95 352.1 275 60.7
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 3.3e-93 345.9 274 61.3
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 5.5e-93 345.1 273 61.2
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 9.5e-93 344.4 273 61.5
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 9.5e-93 344.4 275 61.1
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 2.1e-92 343.2 275 60.4
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 2.8e-92 342.8 274 60.9
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 3.6e-92 342.4 293 58.0
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 3.6e-92 342.4 272 59.6
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 4.7e-92 342.0 272 60.3
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 8.0e-92 341.3 274 60.9
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 1.0e-91 340.9 267 60.3
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.0e-91 340.9 272 60.7
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 1.0e-91 340.9 274 60.2
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.4e-91 340.5 274 60.2
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 1.4e-91 340.5 268 59.7
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 1.8e-91 340.1 271 60.9
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 1.8e-91 340.1 268 61.2
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 2.3e-91 339.7 272 61.4
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 3.0e-91 339.3 266 59.4
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 3.0e-91 339.3 271 61.3
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 3.0e-91 339.3 274 60.6
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 5.2e-91 338.6 271 60.5
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 5.2e-91 338.6 270 60.0
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 5.2e-91 338.6 273 60.1
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 6.8e-91 338.2 274 58.8
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 6.8e-91 338.2 274 60.2
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.2e-90 337.4 277 59.9
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 1.2e-90 337.4 274 59.1
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 1.5e-90 337.0 272 58.8
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 1.5e-90 337.0 274 59.5
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.0e-90 336.7 274 59.5
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.6e-90 336.3 274 59.9
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 2.6e-90 336.3 272 60.3
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 2.6e-90 336.3 272 60.3
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 3.4e-90 335.9 271 60.5
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 4.4e-90 335.5 274 60.6
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 7.5e-90 334.7 271 60.1
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 7.5e-90 334.7 274 61.7
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 9.8e-90 334.3 271 59.4
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 1.7e-89 333.6 268 59.7
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.2e-89 333.2 277 59.6
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 2.2e-89 333.2 274 58.8
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 2.2e-89 333.2 274 59.1
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 2.8e-89 332.8 274 57.7
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 3.7e-89 332.4 269 59.9
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 3.7e-89 332.4 267 58.1
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 3.7e-89 332.4 267 58.1
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 3.7e-89 332.4 274 58.8
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 4.9e-89 332.0 271 58.7
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 6.3e-89 331.6 290 55.9
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 6.3e-89 331.6 271 57.9
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 8.3e-89 331.3 272 59.6
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 1.4e-88 330.5 277 59.2
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 1.8e-88 330.1 267 57.7
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 1.8e-88 330.1 275 59.3
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 1.8e-88 330.1 274 58.0
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 2.4e-88 329.7 273 57.1
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 2.4e-88 329.7 274 58.0
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 3.1e-88 329.3 274 57.3
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 7.0e-88 328.2 278 58.3
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 7.0e-88 328.2 274 58.4
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 9.2e-88 327.8 274 57.7
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 1.2e-87 327.4 277 57.0
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 1.6e-87 327.0 273 58.2
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 1.6e-87 327.0 273 58.2
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 1.6e-87 327.0 276 59.4
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 2.7e-87 326.2 268 57.5
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 2.7e-87 326.2 271 57.2
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 2.7e-87 326.2 275 58.5
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 2.7e-87 326.2 273 59.3
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 3.5e-87 325.9 275 56.4
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 4.5e-87 325.5 274 58.4
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 4.5e-87 325.5 274 57.3
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 4.5e-87 325.5 269 59.5
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 5.9e-87 325.1 269 57.6
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 5.9e-87 325.1 269 57.6
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 5.9e-87 325.1 269 57.6
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 5.9e-87 325.1 274 57.7
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 1.3e-86 323.9 274 58.0
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 1.7e-86 323.6 274 58.4
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 2.3e-86 323.2 267 56.2
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 2.3e-86 323.2 274 58.0
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 3.8e-86 322.4 268 56.0
SGA_v2.0_scaffold90G27648 Striga asiatica HOM05D003473 ORTHO05D003872 3.8e-86 322.4 265 64.2
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 6.6e-86 321.6 274 56.9
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 8.6e-86 321.2 272 57.7
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 1.1e-85 320.9 276 55.8
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 2.5e-85 319.7 268 56.3
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 2.1e-84 316.6 276 57.6
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 2.1e-84 316.6 276 55.8
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 3.6e-84 315.8 276 57.6
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 1.8e-83 313.5 275 55.6
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 4.0e-83 312.4 330 50.9
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 5.2e-83 312.0 273 54.9
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 6.8e-83 311.6 276 54.7
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 8.9e-83 311.2 276 54.7
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 1.2e-82 310.8 277 55.2
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 1.2e-82 310.8 277 55.6
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 1.5e-82 310.5 276 55.1
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 1.5e-82 310.5 278 56.8
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 2.0e-82 310.1 278 55.4
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 4.4e-82 308.9 276 55.4
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 7.5e-82 308.1 275 56.0
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 9.8e-82 307.8 276 54.3
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 1.1e-80 304.3 276 54.0
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 2.4e-80 303.1 271 55.4
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 4.1e-80 302.4 272 54.8
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 7.0e-80 301.6 278 52.9
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 9.2e-80 301.2 276 53.6
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 3.6e-76 289.3 300 49.7
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 3.1e-75 286.2 267 54.3
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 6.8e-75 285.0 272 52.9
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 6.8e-75 285.0 272 52.9
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 1.2e-74 284.3 275 54.9
SGA_v2.0_scaffold26G11350 Striga asiatica HOM05D003473 ORTHO05D003872 1.3e-73 280.8 171 80.1
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 7.8e-71 271.6 271 51.3
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 5.1e-70 268.9 242 54.1
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 1.8e-67 260.4 271 50.6
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 3.4e-66 256.1 276 52.5
SGA_v2.0_scaffold158G37446 Striga asiatica HOM05D003473 ORTHO05D003872 9.2e-64 248.1 171 73.1
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 6.0e-63 245.4 266 48.5
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 7.8e-63 245.0 279 48.7
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.9e-62 242.7 272 46.3
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.1e-61 241.1 274 46.7
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.5e-61 240.7 278 45.7
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 7.3e-61 238.4 232 50.0
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 1.2e-60 237.7 344 40.7
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.2e-60 235.3 270 43.3
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.1e-59 233.0 276 45.3
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 3.1e-59 233.0 159 65.4
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 8.9e-59 231.5 162 63.6
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 8.9e-59 231.5 204 57.4
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.9e-59 231.5 277 44.0
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.7e-57 227.3 195 59.0
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.4e-56 224.2 198 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 7.1e-56 221.9 270 44.8
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.2e-55 221.1 195 57.4
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.5e-53 214.2 271 41.0
unitig_749.g14016 Utricularia gibba HOM05D003473 ORTHO05D003872 2.5e-53 213.4 190 59.5
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.3e-53 212.6 281 42.3
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.4e-51 206.8 196 55.6
SEGI_25367 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 6.9e-51 205.3 191 55.5
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.5e-50 204.1 273 41.0
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.2e-49 200.3 210 52.4
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.8e-49 199.5 241 46.5
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 4.9e-49 199.1 211 52.6
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-47 194.5 272 39.3
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.7e-47 193.4 269 39.0
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.7e-47 193.4 272 38.2
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.3e-46 191.0 272 38.6
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 3.3e-45 186.4 322 40.4
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-42 177.9 270 38.5
Oeu014529.1 Olea europaea HOM05D003473 ORTHO05D003872 2.6e-42 176.8 119 65.5
MBI07_g26633_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 7.6e-42 175.3 257 41.6
RhsimUnG0155700 Rhododendron simsii HOM05D003473 ORTHO05D003872 7.1e-40 168.7 197 48.7
SMO235G0055 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-39 167.9 256 40.2
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 2.7e-39 166.8 327 32.1
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 3.9e-38 162.9 277 37.2
Psat6g143640 Pisum sativum HOM05D003473 ORTHO05D003872 1.5e-37 161.0 111 64.0
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.3e-37 159.5 278 36.0
A03p39790 Brassica napus HOM05D003473 ORTHO05D003872 1.3e-33 147.9 140 52.9
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 4.9e-33 146.0 193 45.1
SGA_v2.0_scaffold158G37441 Striga asiatica HOM05D003473 ORTHO05D003872 1.3e-30 137.9 134 55.2
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 4.0e-27 126.3 323 28.5
DCAR_030014 Daucus carota HOM05D003473 ORTHO05D003872 4.0e-27 126.3 82 72.0
unitig_749.g14017 Utricularia gibba HOM05D003473 ORTHO05D003872 5.3e-27 125.9 80 67.5
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 6.9e-27 125.6 424 25.0
Atru.chr2.997 Acer truncatum HOM05D003473 ORTHO05D003872 1.1e-24 118.2 79 72.2
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.5e-24 117.1 269 30.5
CBR_g40386 Chara braunii HOM05D003473 ORTHO05D003872 6.1e-23 112.5 316 27.5
AagrBONN_evm.TU.Sc2ySwM_228.1749 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.5e-21 107.8 124 48.4
SEGI_32914 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 2.5e-21 107.1 79 58.2
CBR_g48364 Chara braunii HOM05D003473 ORTHO05D003872 9.0e-19 98.6 266 28.9
CBR_g48367 Chara braunii HOM05D003473 ORTHO05D003872 1.2e-18 98.2 268 30.6
CBR_g23900 Chara braunii HOM05D003473 ORTHO05D003872 2.7e-15 87.0 278 29.1
BcaNung02115 Brassica carinata HOM05D003473 ORTHO05D003872 3.3e-13 80.1 108 37.0
C07p40070 Brassica napus HOM05D003473 ORTHO05D003872 3.3e-13 80.1 108 37.0
BolC7t44543H Brassica oleracea HOM05D003473 ORTHO05D003872 3.3e-13 80.1 108 37.0
SMO241G0018 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.9e-08 64.3 183 30.1


User provided reference genes

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