Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08286 Striga asiatica HOM05D022778 ORTHO05D010104 1.1e-77 293.1 142 100.0
SGA_v2.0_scaffold294G47483 Striga asiatica HOM05D022778 ORTHO05D010104 1.6e-60 236.1 118 96.6
SGA_v2.0_scaffold147G36300 Striga asiatica HOM05D022778 ORTHO05D404457 2.8e-20 102.4 51 100.0
SGA_v2.0_scaffold46G17355 Striga asiatica HOM05D002782 ORTHO05D000233 1.4e-19 100.1 113 49.6
SGA_v2.0_scaffold203G41561 Striga asiatica HOM05D022778 ORTHO05D000233 2.9e-17 92.4 139 39.6
SGA_v2.0_scaffold214G42295 Striga asiatica HOM05D012899 ORTHO05D013633 1.5e-16 90.1 103 47.6
VMungo1215G0329 Vigna mungo HOM05D007793 ORTHO05D010104 1.9e-16 89.7 123 43.1
SGA_v2.0_scaffold277G46711 Striga asiatica HOM05D012899 ORTHO05D000233 3.3e-16 89.0 109 46.8
VMungo0647G0191 Vigna mungo HOM05D007793 ORTHO05D010104 8.0e-15 84.3 123 42.3
Phvul.001G089000 Phaseolus vulgaris HOM05D007793 ORTHO05D010104 5.2e-14 81.6 122 39.3
SGA_v2.0_scaffold61G21245 Striga asiatica HOM05D000036 ORTHO05D010104 1.2e-13 80.5 135 37.0
VMungo0464G1009 Vigna mungo HOM05D007793 ORTHO05D010104 1.3e-12 77.0 77 49.4
SGA_v2.0_scaffold177G39442 Striga asiatica HOM05D007793 ORTHO05D000233 2.8e-12 75.9 85 45.9
SGA_v2.0_scaffold624G53235 Striga asiatica HOM05D022778 ORTHO05D000233 2.8e-12 75.9 85 45.9
TPR.G11501 Trifolium pratense HOM05D007793 ORTHO05D010104 2.4e-11 72.8 120 38.3
Phvul.011G125600 Phaseolus vulgaris HOM05D007793 ORTHO05D010104 5.4e-11 71.6 77 45.5
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 7.0e-11 71.2 134 35.1
Medtr2g037270 Medicago truncatula HOM05D007793 ORTHO05D010104 2.0e-10 69.7 126 34.9
Medtr3g011560 Medicago truncatula HOM05D007793 ORTHO05D010104 2.0e-10 69.7 126 34.9
Medtr8g017000 Medicago truncatula HOM05D007793 ORTHO05D010104 2.0e-10 69.7 126 34.9
TPR.G11532 Trifolium pratense HOM05D007793 ORTHO05D010104 1.1e-08 63.9 143 32.9
VMungo0251G1369 Vigna mungo HOM05D007793 ORTHO05D010104 1.5e-08 63.5 67 41.8
Psat5g276440 Pisum sativum HOM05D007793 ORTHO05D000636 5.2e-06 55.1 102 34.3


User provided reference genes

Program Settings