Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08258 Striga asiatica HOM05D027553 ORTHO05D009940 7.2e-122 441.0 305 100.0
SGA_v2.0_scaffold33G13568 Striga asiatica HOM05D027553 ORTHO05D014193 1.5e-90 337.0 373 55.8
SGA_v2.0_scaffold18G08264 Striga asiatica HOM05D000045 ORTHO05D009940 6.2e-57 225.3 308 47.4
SGA_v2.0_scaffold108G30830 Striga asiatica HOM05D000045 ORTHO05D009940 4.9e-54 215.7 182 66.5
SGA_v2.0_scaffold4G01942 Striga asiatica HOM05D000045 ORTHO05D009940 7.1e-53 211.8 182 65.4
SGA_v2.0_scaffold263G45977 Striga asiatica HOM05D000045 ORTHO05D009940 4.4e-34 149.4 227 63.0
SGA_v2.0_scaffold177G39451 Striga asiatica HOM05D027553 ORTHO05D009940 3.8e-22 109.8 118 56.8
SGA_v2.0_scaffold515G52659 Striga asiatica HOM05D000045 ORTHO05D009940 3.3e-18 96.7 236 31.8
SGA_v2.0_scaffold56G20041 Striga asiatica HOM05D000045 ORTHO05D009940 2.8e-17 93.6 136 41.9
SGA_v2.0_scaffold106G30721 Striga asiatica HOM05D000045 ORTHO05D009940 7.0e-16 89.0 64 62.5
SGA_v2.0_scaffold126G33925 Striga asiatica HOM05D000045 ORTHO05D009940 7.0e-16 89.0 136 41.2
SGA_v2.0_scaffold36G14482 Striga asiatica HOM05D024854 ORTHO05D009940 1.6e-15 87.8 64 60.9
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.7e-15 85.5 110 47.3
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.7e-15 85.5 110 47.3
SGA_v2.0_scaffold68G22942 Striga asiatica HOM05D000045 ORTHO05D002701 1.9e-13 80.9 85 52.9
TWI59G1432 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.2e-13 80.1 65 53.8
SGA_v2.0_scaffold109G31025 Striga asiatica HOM05D000045 ORTHO05D002701 7.2e-13 79.0 61 54.1
PSO832G2963 Papaver somniferum HOM05D000045 ORTHO05D000067 9.4e-13 78.6 66 57.6
TWI60G0659 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.2e-12 78.2 101 42.6
TWI59G0983 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.6e-12 76.6 122 40.2
SGA_v2.0_scaffold52G19239 Striga asiatica HOM05D022335 ORTHO05D009940 6.1e-12 75.9 152 35.5
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 8.0e-12 75.5 58 62.1
SGA_v2.0_scaffold29G12137 Striga asiatica HOM05D000045 ORTHO05D009940 2.3e-11 73.9 73 47.9
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-11 73.9 122 36.1
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-11 73.9 122 36.1
SGA_v2.0_scaffold35G14139 Striga asiatica HOM05D000045 ORTHO05D009940 3.0e-11 73.6 76 48.7
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-11 72.8 125 32.8
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 6.8e-11 72.4 65 44.6
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.8e-11 72.4 65 53.8
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.8e-11 72.0 122 35.2
SGA_v2.0_scaffold109G31088 Striga asiatica HOM05D000045 ORTHO05D009940 2.6e-10 70.5 76 47.4
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.6e-10 70.5 127 33.9
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.6e-10 70.5 127 33.9
TWI77G0218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.6e-10 70.5 64 48.4
TWI15G0461 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.4e-10 70.1 63 47.6
TWI09G0748 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 4.4e-10 69.7 116 40.5
PSO675G3853 Papaver somniferum HOM05D000045 ORTHO05D000067 5.7e-10 69.3 103 39.8
TWI56G1316 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 5.7e-10 69.3 118 35.6
PSO063G1228 Papaver somniferum HOM05D000045 ORTHO05D000067 7.5e-10 68.9 137 32.1
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.5e-10 68.9 118 35.6
PSO063G5377 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-09 68.2 68 47.1
ECA240G2928 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.2e-09 67.4 65 47.7
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-09 67.4 65 41.5
PSO591G0277 Papaver somniferum HOM05D000045 ORTHO05D009940 2.2e-09 67.4 152 30.9
TWI81G0019 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.8e-09 67.0 123 34.1
PSO017G1702 Papaver somniferum HOM05D000045 ORTHO05D000067 3.7e-09 66.6 68 45.6
PSO210G5073 Papaver somniferum HOM05D000045 ORTHO05D009940 3.7e-09 66.6 64 46.9
PSO675G7638 Papaver somniferum HOM05D000045 ORTHO05D009940 4.8e-09 66.2 64 42.2
ECA238G0146 Erigeron canadensis HOM05D000045 ORTHO05D000067 6.3e-09 65.9 116 37.1
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.3e-09 65.9 123 34.1
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 8.3e-09 65.5 62 41.9
PSO765G0007 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-08 65.1 64 48.4
TWI12G1108 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-08 65.1 51 52.9
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-08 63.9 64 43.8
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 2.4e-08 63.9 88 34.1
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.1e-08 63.5 89 34.8
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.1e-08 63.5 64 42.2
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 3.1e-08 63.5 64 45.3
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 3.1e-08 63.5 64 45.3
PSO063G3008 Papaver somniferum HOM05D000045 ORTHO05D000067 4.1e-08 63.2 65 36.9
PSO349G0194 Papaver somniferum HOM05D000045 ORTHO05D000067 4.1e-08 63.2 90 43.3
TWI18G1436 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 4.1e-08 63.2 113 38.1
SGA_v2.0_scaffold29G12202 Striga asiatica HOM05D000045 ORTHO05D000067 5.4e-08 62.8 64 51.6
PSO339G0810 Papaver somniferum HOM05D062982 ORTHO05D009940 1.2e-07 61.6 77 42.9
PSO675G0011 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 61.6 65 38.5
CANSAT56G1854 Cannabis sativa HOM05D000045 ORTHO05D000067 2.0e-07 60.8 80 45.0
CiPaw.05G224800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.0e-07 60.8 64 43.8
CANSAT78G0134 Cannabis sativa HOM05D000045 ORTHO05D000067 3.5e-07 60.1 80 42.5
TWI60G1645 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.5e-07 60.1 66 40.9
PSO017G4977 Papaver somniferum HOM05D000045 ORTHO05D000067 4.5e-07 59.7 62 40.3
SGA_v2.0_scaffold89G27538 Striga asiatica HOM05D027553 ORTHO05D009940 4.5e-07 59.7 117 33.3
SGA_v2.0_scaffold50G18569 Striga asiatica HOM05D000045 ORTHO05D000067 7.7e-07 58.9 65 44.6
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.0e-06 58.5 155 29.0
Lj6g0025680 Lotus japonicus HOM05D000045 ORTHO05D000067 1.0e-06 58.5 61 44.3
PSO675G4083 Papaver somniferum HOM05D000045 ORTHO05D000067 1.0e-06 58.5 152 29.6
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 1.0e-06 58.5 64 39.1
TWI31G0500 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.0e-06 58.5 117 35.0
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.0e-06 58.5 117 35.0
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 2.3e-06 57.4 64 37.5
Atru.chr7.967 Acer truncatum HOM05D000045 ORTHO05D000067 2.9e-06 57.0 64 39.1
Glyma.11G126700 Glycine max HOM05D000045 ORTHO05D000067 2.9e-06 57.0 64 39.1
PSO017G6773 Papaver somniferum HOM05D000045 ORTHO05D009940 2.9e-06 57.0 65 40.0
TWI12G1011 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.9e-06 57.0 76 39.5
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.8e-06 56.6 64 48.4
PSO210G6125 Papaver somniferum HOM05D000045 ORTHO05D009940 3.8e-06 56.6 64 40.6
CANSAT78G0103 Cannabis sativa HOM05D000045 ORTHO05D000067 6.5e-06 55.8 94 40.4
Prupe.1G268400 Prunus persica HOM05D000045 ORTHO05D009940 6.5e-06 55.8 66 37.9
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 6.5e-06 55.8 127 28.3
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.6e-06 55.5 76 31.6
PSO478G4428 Papaver somniferum HOM05D000045 ORTHO05D000067 8.6e-06 55.5 62 38.7


User provided reference genes

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