Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 6.1e-166 587.4 300 100.0
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 8.7e-112 407.5 335 69.3
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 5.5e-98 361.7 334 62.3
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 3.6e-97 359.0 332 63.0
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.2e-90 334.7 333 59.5
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.7e-89 332.0 334 59.6
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 6.1e-89 331.6 331 57.4
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.1e-87 327.4 332 58.1
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.2e-86 323.2 346 56.4
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 2.8e-86 322.8 298 60.4
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 1.4e-85 320.5 345 56.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-85 320.1 323 59.1
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 3.1e-85 319.3 336 56.0
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.2e-84 317.4 342 56.7
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.6e-84 317.0 344 56.7
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.5e-84 315.8 338 56.2
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 4.5e-84 315.5 337 55.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.2e-83 313.2 338 56.2
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.9e-83 312.8 342 55.3
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 3.8e-83 312.4 335 54.0
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 5.0e-83 312.0 330 55.5
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 8.5e-83 311.2 343 56.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.1e-82 310.8 346 54.9
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.1e-82 310.8 330 56.7
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 2.5e-82 309.7 331 54.7
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.2e-82 308.9 346 53.8
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 7.2e-82 308.1 336 54.8
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 7.2e-82 308.1 333 54.7
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 9.4e-82 307.8 339 53.7
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.2e-81 307.4 330 56.4
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 1.2e-81 307.4 342 52.6
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.2e-81 307.4 348 54.9
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.2e-81 307.4 346 53.8
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.6e-81 307.0 341 54.0
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 2.1e-81 306.6 335 55.8
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.7e-81 306.2 331 53.5
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 2.7e-81 306.2 339 54.9
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 4.7e-81 305.4 331 53.5
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 4.7e-81 305.4 337 54.3
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.1e-81 305.1 334 54.2
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 6.1e-81 305.1 342 55.0
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 8.0e-81 304.7 338 54.7
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 1.0e-80 304.3 339 53.7
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.0e-80 304.3 334 55.1
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.8e-80 303.5 335 53.4
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.3e-80 303.1 384 50.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.3e-80 303.1 336 54.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 3.0e-80 302.8 337 52.8
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 3.0e-80 302.8 322 54.3
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 3.0e-80 302.8 337 53.7
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 3.0e-80 302.8 344 53.2
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.7e-80 301.6 337 53.4
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 6.7e-80 301.6 342 53.8
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 8.8e-80 301.2 332 54.2
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 8.8e-80 301.2 342 53.5
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.1e-79 300.8 341 55.1
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 3.3e-79 299.3 338 52.7
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 3.3e-79 299.3 340 52.1
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 4.4e-79 298.9 333 52.6
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 5.7e-79 298.5 269 61.0
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 5.7e-79 298.5 269 61.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 7.5e-79 298.1 345 53.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 7.5e-79 298.1 309 57.3
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 8.2e-78 294.7 334 51.8
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.1e-77 294.3 336 53.3
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.1e-77 294.3 334 51.8
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.4e-77 293.1 331 54.1
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 4.1e-77 292.4 340 52.6
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 4.1e-77 292.4 250 64.0
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 5.3e-77 292.0 273 58.2
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.2e-76 290.8 330 52.1
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 2.0e-76 290.0 333 52.6
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.0e-76 290.0 304 56.6
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.7e-76 289.7 330 52.1
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 3.5e-76 289.3 337 51.3
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 7.7e-76 288.1 269 58.7
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 7.7e-76 288.1 322 54.3
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 2.2e-75 286.6 304 55.6
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.9e-75 286.2 412 45.6
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.8e-75 285.8 252 62.3
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.1e-74 284.3 354 51.1
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.5e-74 283.1 252 61.1
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 2.5e-74 283.1 334 51.8
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 4.2e-74 282.3 333 53.5
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 7.2e-74 281.6 256 60.9
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 6.1e-73 278.5 310 52.6
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.4e-72 277.3 310 52.3
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.4e-72 277.3 310 52.3
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.8e-72 276.9 310 52.3
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.3e-72 276.6 315 51.4
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.3e-72 276.6 331 52.6
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.5e-71 273.9 316 52.8
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.4e-71 272.7 314 51.0
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 5.7e-71 271.9 336 48.8
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 9.8e-71 271.2 326 50.9
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.3e-70 270.8 276 54.7
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.3e-70 270.8 302 54.3
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 3.7e-70 269.2 316 50.0
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 3.7e-70 269.2 334 48.2
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.1e-69 265.8 277 54.2
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 2.0e-68 263.5 335 48.1
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 4.5e-68 262.3 319 50.5
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 5.9e-68 261.9 256 56.6
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.9e-66 256.9 248 58.5
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 2.1e-65 253.4 299 52.2
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.0e-64 251.1 311 51.8
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.3e-64 250.0 255 55.7
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 2.7e-60 236.5 256 52.0
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.5e-60 235.7 189 66.1
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.3e-58 229.6 339 46.3
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 2.6e-55 219.9 301 46.5
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 5.4e-53 212.2 322 41.0
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 2.0e-52 210.3 215 56.7
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 6.2e-49 198.7 232 51.3
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-48 197.2 127 78.0
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-48 197.2 127 78.0
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 1.9e-45 187.2 125 72.8
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 3.5e-44 183.0 126 70.6
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.2e-39 167.9 250 40.4
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-38 164.5 148 62.2
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 2.4e-37 160.2 232 41.4
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 3.0e-35 153.3 234 39.3
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 6.6e-35 152.1 247 36.4
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 8.1e-33 145.2 91 81.3
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.4e-32 144.4 151 57.0
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.9e-30 136.7 154 53.2
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 6.4e-30 135.6 243 35.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 9.2e-29 131.7 148 52.7
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.1e-28 130.6 119 61.3
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 2.1e-28 130.6 116 59.5
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 4.6e-28 129.4 102 63.7
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 4.6e-28 129.4 241 33.2
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 9.6e-26 121.7 151 50.3
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.5e-23 114.4 65 83.1
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 9.9e-23 111.7 93 61.3
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 1.3e-22 111.3 257 30.4
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.7e-22 110.9 66 78.8
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-21 107.8 70 72.9
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 3.2e-21 106.7 68 75.0
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.3e-19 100.5 209 30.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 5.6e-18 95.9 96 57.3
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-17 94.7 94 58.5
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 3.1e-16 90.1 89 56.2
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 3.1e-16 90.1 89 56.2
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 3.1e-16 90.1 89 56.2
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 4.5e-15 86.3 50 80.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 7.6e-15 85.5 132 43.9
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 6.4e-14 82.4 60 68.3
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 1.9e-13 80.9 52 75.0
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 3.5e-12 76.6 97 45.4
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 2.3e-11 73.9 47 76.6
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.1e-09 67.4 53 62.3


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