Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold189G40383 Striga asiatica HOM05D002414 ORTHO05D002531 1.4e-97 359.8 202 100.0
SGA_v2.0_scaffold4G01944 Striga asiatica HOM05D002414 ORTHO05D002531 1.7e-90 336.3 191 100.0
Oeu031281.1 Olea europaea HOM05D002414 ORTHO05D002531 3.0e-15 86.3 71 59.2
Oeu042313.1 Olea europaea HOM05D002414 ORTHO05D002531 1.5e-14 84.0 150 36.7
Migut.B01009 Erythranthe guttata HOM05D002414 ORTHO05D002531 2.5e-14 83.2 54 74.1
Dinv04255 Davidia involucrata HOM05D002414 ORTHO05D002531 3.3e-14 82.8 55 69.1
PGSC0003DMG400022934 Solanum tuberosum HOM05D002414 ORTHO05D002531 2.8e-13 79.7 57 63.2
Oeu036483.1 Olea europaea HOM05D002414 ORTHO05D002531 4.8e-13 79.0 101 49.5
SalBow7G3093 Salvia bowleyana HOM05D002414 ORTHO05D002531 4.8e-13 79.0 60 66.7
Sopen11g020390 Solanum pennellii HOM05D002414 ORTHO05D002531 3.1e-12 76.3 143 39.2
Nitab4.5_0000878g0020 Nicotiana tabacum HOM05D002414 ORTHO05D002531 5.3e-12 75.5 57 61.4
Cc07_g19220 Coffea canephora HOM05D002414 ORTHO05D002531 6.9e-12 75.1 58 63.8
CSS0046973 Camellia sinensis var. sinensis HOM05D002414 ORTHO05D002531 9.0e-12 74.7 55 61.8
Peaxi162Scf00126g00240 Petunia axillaris HOM05D002414 ORTHO05D002531 1.5e-11 73.9 55 60.0
Solyc11g044900.2 Solanum lycopersicum HOM05D002414 ORTHO05D002531 3.4e-11 72.8 143 38.5
Nitab4.5_0002762g0020 Nicotiana tabacum HOM05D002414 ORTHO05D002531 4.5e-11 72.4 114 39.5
unitig_736.g22772 Utricularia gibba HOM05D002414 ORTHO05D002531 4.5e-11 72.4 95 46.3
RcHm_v2.0_Chr2g0124151 Rosa chinensis HOM05D002414 ORTHO05D002531 2.9e-10 69.7 53 58.5
PSO541G2586 Papaver somniferum HOM05D002414 ORTHO05D002531 3.8e-10 69.3 55 58.2
PSO675G7771 Papaver somniferum HOM05D002414 ORTHO05D002531 3.8e-10 69.3 55 58.2
Eucgr.H05073 Eucalyptus grandis HOM05D002414 ORTHO05D002531 6.5e-10 68.6 57 59.6
arahy.Tifrunner.gnm1.ann1.CIGQ09 Arachis hypogaea HOM05D002414 ORTHO05D002531 1.4e-09 67.4 95 43.2
Actinidia16512 Actinidia chinensis HOM05D002414 ORTHO05D002531 2.5e-09 66.6 55 58.2
TAR627G0445 Trochodendron aralioides HOM05D002414 ORTHO05D002531 3.2e-09 66.2 99 45.5
CAN.G500.4 Capsicum annuum HOM05D002414 ORTHO05D002531 4.2e-09 65.9 63 57.1
CAN.G875.5 Capsicum annuum HOM05D002414 ORTHO05D002531 4.2e-09 65.9 63 57.1
PGR102G2824 Punica granatum HOM05D002414 ORTHO05D002531 5.5e-09 65.5 130 36.2
Rhsim09G0013600 Rhododendron simsii HOM05D002414 ORTHO05D002531 7.1e-09 65.1 56 57.1
Prupe.4G282700 Prunus persica HOM05D002414 ORTHO05D002531 1.2e-08 64.3 99 41.4
Peaxi162Scf00047g00842 Petunia axillaris HOM05D002414 ORTHO05D002531 1.6e-08 63.9 58 53.4
Aqoxy1G01406 Aquilegia oxysepala HOM05D002414 ORTHO05D002531 2.7e-08 63.2 55 56.4
GSVIVG01022387001 Vitis vinifera HOM05D002414 ORTHO05D002531 2.7e-08 63.2 55 50.9
arahy.Tifrunner.gnm1.ann1.73T74K Arachis hypogaea HOM05D002414 ORTHO05D002531 3.5e-08 62.8 95 41.1
MBI18_g05078_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 4.6e-08 62.4 55 49.1
MBI18_g07837_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 4.6e-08 62.4 55 49.1
MBI18_g45457_MAGBIO Magnolia biondii HOM05D002414 ORTHO05D002531 4.6e-08 62.4 55 49.1
TWI79G0342 Tripterygium wilfordii HOM05D002414 ORTHO05D002531 4.6e-08 62.4 62 50.0
Solyc09g091860.4 Solanum lycopersicum HOM05D002414 ORTHO05D002531 7.9e-08 61.6 53 56.6
Sopen09g034750 Solanum pennellii HOM05D002414 ORTHO05D002531 7.9e-08 61.6 53 56.6
FAN26G0802 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.0e-07 61.2 138 34.8
Lalb_Chr11g0068761 Lupinus albus HOM05D002414 ORTHO05D002531 1.0e-07 61.2 75 42.7
PGSC0003DMG400029638 Solanum tuberosum HOM05D002414 ORTHO05D002531 1.0e-07 61.2 88 43.2
FvH4_1g25680 Fragaria vesca HOM05D002414 ORTHO05D002531 1.3e-07 60.8 137 33.6
Oeu033679.1 Olea europaea HOM05D002414 ORTHO05D002531 1.3e-07 60.8 96 41.7
PGSC0003DMG400044542 Solanum tuberosum HOM05D002414 ORTHO05D002531 1.3e-07 60.8 54 55.6
Medtr3g097090 Medicago truncatula HOM05D002414 ORTHO05D002531 2.3e-07 60.1 140 37.1
Thecc.01G143400 Theobroma cacao HOM05D002414 ORTHO05D002531 2.3e-07 60.1 53 56.6
Ah.16g104700 Amaranthus hybridus HOM05D002414 ORTHO05D002531 3.0e-07 59.7 126 35.7
Ca_17007_v3 Cicer arietinum L. HOM05D002414 ORTHO05D002531 3.0e-07 59.7 58 50.0
FAN23G0249 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.0e-07 59.7 118 37.3
ATR0763G181 Amborella trichopoda HOM05D002414 ORTHO05D002531 3.9e-07 59.3 102 40.2
Lj1g0021263 Lotus japonicus HOM05D002414 ORTHO05D002531 3.9e-07 59.3 57 47.4
Nitab4.5_0004974g0050 Nicotiana tabacum HOM05D002414 ORTHO05D002531 6.7e-07 58.5 136 33.8
Psat5g058280 Pisum sativum HOM05D002414 ORTHO05D002531 8.7e-07 58.2 112 40.2
Lsat_1_v5_gn_7_55620 Lactuca sativa HOM05D002414 ORTHO05D002531 1.1e-06 57.8 53 52.8
DCAR_007700 Daucus carota HOM05D002414 ORTHO05D002531 1.9e-06 57.0 55 50.9
Lj1g0003619 Lotus japonicus HOM05D002414 ORTHO05D002531 3.3e-06 56.2 93 36.6
CiPaw.04G179700 Carya illinoinensis HOM05D002414 ORTHO05D002531 5.7e-06 55.5 53 47.2
TPR.G7854 Trifolium pratense HOM05D002414 ORTHO05D002531 5.7e-06 55.5 58 48.3
SHI13691 Sapria himalayana HOM05D002414 ORTHO05D002531 7.4e-06 55.1 55 47.3
Carub.0005s1161 Capsella rubella HOM05D002414 ORTHO05D002531 9.7e-06 54.7 62 40.3
Nn7g38299 Nelumbo nucifera HOM05D002414 ORTHO05D002531 9.7e-06 54.7 55 49.1


User provided reference genes

Program Settings