Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold189G40374 Striga asiatica HOM05D023019 ORTHO05D013546 4.7e-210 734.2 345 100.0
SGA_v2.0_scaffold386G50500 Striga asiatica HOM05D023019 ORTHO05D013546 1.2e-149 533.5 346 76.0
SGA_v2.0_scaffold386G50502 Striga asiatica HOM05D023019 ORTHO05D013546 6.7e-148 527.7 342 75.7
SGA_v2.0_scaffold56G20030 Striga asiatica HOM05D023019 ORTHO05D013546 1.0e-140 503.8 342 74.6
SGA_v2.0_scaffold94G28510 Striga asiatica HOM05D012549 ORTHO05D013546 4.2e-33 146.4 339 29.8
SGA_v2.0_scaffold80G25794 Striga asiatica HOM05D012549 ORTHO05D013546 1.8e-31 141.0 339 29.8
SGA_v2.0_scaffold98G29332 Striga asiatica HOM05D012549 ORTHO05D013546 3.0e-31 140.2 339 31.6
SGA_v2.0_scaffold199G41212 Striga asiatica HOM05D012549 ORTHO05D013546 2.5e-30 137.1 359 30.1
SGA_v2.0_scaffold98G29336 Striga asiatica HOM05D012549 ORTHO05D013546 3.3e-30 136.7 346 30.3
SGA_v2.0_scaffold80G25855 Striga asiatica HOM05D012549 ORTHO05D013546 4.3e-30 136.3 346 29.5
SGA_v2.0_scaffold80G25772 Striga asiatica HOM05D012549 ORTHO05D013546 9.6e-30 135.2 340 29.7
SGA_v2.0_scaffold80G25779 Striga asiatica HOM05D012549 ORTHO05D013546 9.9e-27 125.2 325 29.5
SGA_v2.0_scaffold98G29327 Striga asiatica HOM05D012549 ORTHO05D013546 6.9e-20 102.4 344 25.9
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 3.8e-10 70.1 332 24.4
CSS0039427 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 2.5e-09 67.4 318 22.0
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 4.2e-09 66.6 252 26.6
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 5.5e-09 66.2 332 23.8
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 5.5e-09 66.2 361 25.5
Sabra07G0023700 Salix brachista HOM05D002420 ORTHO05D002422 2.1e-08 64.3 173 32.4
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 2.7e-08 63.9 371 25.3
Duzib147G0480 Durio zibethinus HOM05D002420 ORTHO05D002422 6.1e-08 62.8 301 24.9
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 7.9e-08 62.4 358 25.7
FAN23G1330 Fragaria x ananassa HOM05D002420 ORTHO05D002422 1.4e-07 61.6 200 31.0
FAN24G2236 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-07 61.2 139 33.1
FvH4_1g13490 Fragaria vesca HOM05D002420 ORTHO05D002422 2.3e-07 60.8 200 30.5
FAN19G1318 Fragaria x ananassa HOM05D002420 ORTHO05D002422 2.3e-07 60.8 200 30.5
FAN26G2215 Fragaria x ananassa HOM05D002420 ORTHO05D002422 2.3e-07 60.8 200 30.5
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 2.3e-07 60.8 152 28.9
QL08p043324 Quercus lobata HOM05D001729 ORTHO05D001155 3.9e-07 60.1 162 32.7
Hund16586 Selenicereus undatus HOM05D002420 ORTHO05D002422 3.9e-07 60.1 171 30.4
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 8.8e-07 58.9 163 34.4
Thecc.01G037600 Theobroma cacao HOM05D002420 ORTHO05D002422 8.8e-07 58.9 173 28.9
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.5e-06 58.2 345 22.3
Manes.02G092400 Manihot esculenta HOM05D002420 ORTHO05D002422 1.5e-06 58.2 324 21.6
PSO761G0401 Papaver somniferum HOM05D008326 ORTHO05D001155 1.5e-06 58.2 314 22.3
Lsat_1_v5_gn_5_38761 Lactuca sativa HOM05D008898 ORTHO05D001155 1.9e-06 57.8 173 29.5
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 2.5e-06 57.4 161 31.1
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 2.5e-06 57.4 170 29.4
Duzib187G1349 Durio zibethinus HOM05D002420 ORTHO05D002422 7.4e-06 55.8 173 28.9
Nitab4.5_0000434g0020 Nicotiana tabacum HOM05D002420 ORTHO05D002422 7.4e-06 55.8 163 28.8
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 9.7e-06 55.5 141 30.5
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.7e-06 55.5 141 30.5


User provided reference genes

Program Settings