Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold189G40373 Striga asiatica HOM05D000886 ORTHO05D000525 2.5e-55 218.8 130 100.0
SGA_v2.0_scaffold1027G53798 Striga asiatica HOM05D000886 ORTHO05D000525 1.2e-44 183.3 112 96.4
SGA_v2.0_scaffold73G24395 Striga asiatica HOM05D000886 ORTHO05D000525 1.0e-40 170.2 124 74.2
SGA_v2.0_scaffold51G18833 Striga asiatica HOM05D031511 ORTHO05D000525 4.3e-31 138.3 129 75.2
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 4.6e-25 118.2 103 62.1
SGA_v2.0_scaffold225G43089 Striga asiatica HOM05D031511 ORTHO05D000525 2.9e-19 99.0 67 85.1
SalBow1G2078 Salvia bowleyana HOM05D000886 ORTHO05D000525 4.9e-19 98.2 101 51.5
Migut.K00159 Erythranthe guttata HOM05D000886 ORTHO05D000525 3.5e-17 92.0 103 49.5
Oeu060771.1 Olea europaea HOM05D000886 ORTHO05D000525 1.3e-16 90.1 101 48.5
Oeu064751.1 Olea europaea HOM05D000886 ORTHO05D000525 1.1e-15 87.0 103 45.6
SGA_v2.0_scaffold10G05140 Striga asiatica HOM05D000206 ORTHO05D002004 1.1e-15 87.0 40 100.0
Oeu060772.1 Olea europaea HOM05D000886 ORTHO05D000525 1.5e-12 76.6 103 40.8
Migut.J01613 Erythranthe guttata HOM05D000886 ORTHO05D000525 2.0e-12 76.3 101 39.6
Actinidia38124 Actinidia chinensis HOM05D000886 ORTHO05D000525 1.3e-11 73.6 101 40.6
MSTRG.19777 Avicennia marina HOM05D000886 ORTHO05D000525 1.3e-11 73.6 107 39.3
Oeu064753.1 Olea europaea HOM05D000886 ORTHO05D000525 1.7e-11 73.2 103 40.8
Nn7g36495 Nelumbo nucifera HOM05D000886 ORTHO05D000525 4.9e-11 71.6 103 37.9
HanXRQChr15g0495501 Helianthus annuus HOM05D000886 ORTHO05D000525 1.1e-10 70.5 101 37.6
Lsat_1_v5_gn_5_111240 Lactuca sativa HOM05D000886 ORTHO05D000525 1.1e-10 70.5 101 37.6
HanXRQChr15g0495511 Helianthus annuus HOM05D000886 ORTHO05D000525 1.4e-10 70.1 101 35.6
Lj2A411T32 Lonicera japonica HOM05D000886 ORTHO05D000525 1.9e-10 69.7 103 36.9
SalBow6G4799 Salvia bowleyana HOM05D000886 ORTHO05D000525 1.9e-10 69.7 101 38.6
Hma1.2p1_1283F.1_g272790 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 2.4e-10 69.3 118 34.7
Lsat_1_v5_gn_5_111280 Lactuca sativa HOM05D000886 ORTHO05D000525 2.4e-10 69.3 101 38.6
ECA232G4885 Erigeron canadensis HOM05D000886 ORTHO05D000525 4.2e-10 68.6 107 35.5
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 4.2e-10 68.6 104 40.4
Lsat_1_v5_gn_5_161580 Lactuca sativa HOM05D000886 ORTHO05D000525 4.2e-10 68.6 103 35.9
CAN.G208.12 Capsicum annuum HOM05D000886 ORTHO05D000525 5.4e-10 68.2 101 39.6
Lj8A26T46 Lonicera japonica HOM05D000886 ORTHO05D000525 5.4e-10 68.2 93 36.6
Dinv12028 Davidia involucrata HOM05D000886 ORTHO05D000525 9.3e-10 67.4 103 37.9
HanXRQChr09g0253651 Helianthus annuus HOM05D000886 ORTHO05D000525 9.3e-10 67.4 98 37.8
Rhsim04G0117500 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.2e-09 67.0 98 40.8
Rhsim04G0117600 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.2e-09 67.0 98 39.8
Haze_20280 Corylus avellana HOM05D000886 ORTHO05D000525 2.1e-09 66.2 101 40.6
Haze_20285 Corylus avellana HOM05D000886 ORTHO05D000525 2.1e-09 66.2 101 40.6
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 2.7e-09 65.9 98 36.7
CAN.G959.15 Capsicum annuum HOM05D000886 ORTHO05D000525 2.7e-09 65.9 103 37.9
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.7e-09 65.9 103 38.8
Sopen12g031440 Solanum pennellii HOM05D000886 ORTHO05D000525 2.7e-09 65.9 101 40.6
ECA232G0479 Erigeron canadensis HOM05D000886 ORTHO05D000525 4.6e-09 65.1 103 35.0
Glyma.07G143200 Glycine max HOM05D000886 ORTHO05D000525 4.6e-09 65.1 93 39.8
Lsat_1_v5_gn_9_55720 Lactuca sativa HOM05D000886 ORTHO05D000525 4.6e-09 65.1 101 36.6
Lalb_Chr03g0042881 Lupinus albus HOM05D000886 ORTHO05D000525 4.6e-09 65.1 98 38.8
HanXRQChr15g0495491 Helianthus annuus HOM05D000886 ORTHO05D000525 6.0e-09 64.7 98 36.7
MD09G1279200 Malus domestica HOM05D000886 ORTHO05D000525 6.0e-09 64.7 101 38.6
Phvul.008G111200 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 6.0e-09 64.7 93 37.6
Solyc12g094540.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 6.0e-09 64.7 101 38.6
SGA_v2.0_scaffold69G23180 Striga asiatica HOM05D000886 ORTHO05D000525 6.0e-09 64.7 104 37.5
DCAR_013532 Daucus carota HOM05D000886 ORTHO05D000525 7.8e-09 64.3 116 36.2
Migut.J01614 Erythranthe guttata HOM05D000886 ORTHO05D000525 7.8e-09 64.3 103 36.9
HanXRQChr09g0255181 Helianthus annuus HOM05D000886 ORTHO05D000525 7.8e-09 64.3 98 36.7
Lsat_1_v5_gn_9_55780 Lactuca sativa HOM05D000886 ORTHO05D000525 7.8e-09 64.3 101 36.6
Manes.08G161704 Manihot esculenta HOM05D000886 ORTHO05D000525 7.8e-09 64.3 118 35.6
SalBow6G0974 Salvia bowleyana HOM05D000886 ORTHO05D000525 7.8e-09 64.3 103 37.9
Atru.chr1.1368 Acer truncatum HOM05D000886 ORTHO05D000525 1.0e-08 63.9 104 39.4
Aqoxy2G02684 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.0e-08 63.9 101 32.7
Dinv17692 Davidia involucrata HOM05D000886 ORTHO05D000525 1.0e-08 63.9 103 35.0
MD03G1253300 Malus domestica HOM05D000886 ORTHO05D000525 1.7e-08 63.2 119 35.3
Nitab4.5_0003544g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.3e-08 62.8 103 38.8
PGSC0003DMG400029410 Solanum tuberosum HOM05D000886 ORTHO05D000525 2.3e-08 62.8 101 39.6
Aqoxy2G02678 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 3.0e-08 62.4 101 36.6
Migut.K00157 Erythranthe guttata HOM05D000886 ORTHO05D000525 3.0e-08 62.4 114 37.7
Lsat_1_v5_gn_9_55760 Lactuca sativa HOM05D000886 ORTHO05D000525 3.0e-08 62.4 101 36.6
Nn4g25539 Nelumbo nucifera HOM05D000886 ORTHO05D000525 3.0e-08 62.4 98 36.7
CiPaw.09G051600 Carya illinoinensis HOM05D000886 ORTHO05D000525 3.9e-08 62.0 103 35.9
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 3.9e-08 62.0 116 33.6
Nitab4.5_0000642g0270 Nicotiana tabacum HOM05D000886 ORTHO05D000525 3.9e-08 62.0 103 37.9
ClCG10G016290 Citrullus lanatus HOM05D000886 ORTHO05D000525 5.1e-08 61.6 103 37.9
Nitab4.5_0011877g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 6.6e-08 61.2 106 34.0
CsaV3_3G040060 Cucumis sativus L. HOM05D000886 ORTHO05D000525 8.7e-08 60.8 101 37.6
Dinv03445 Davidia involucrata HOM05D000886 ORTHO05D000525 8.7e-08 60.8 121 33.1
Nn4g25540 Nelumbo nucifera HOM05D000886 ORTHO05D000525 8.7e-08 60.8 101 33.7
MELO3C009746.2 Cucumis melo HOM05D000886 ORTHO05D000525 1.1e-07 60.5 101 37.6
HanXRQChr15g0495481 Helianthus annuus HOM05D000886 ORTHO05D000525 1.1e-07 60.5 98 34.7
TAR623G1218 Trochodendron aralioides HOM05D000886 ORTHO05D000525 1.1e-07 60.5 98 36.7
Cc06_g20650 Coffea canephora HOM05D000886 ORTHO05D000525 1.5e-07 60.1 109 37.6
ECA232G1837 Erigeron canadensis HOM05D000886 ORTHO05D000525 1.5e-07 60.1 101 34.7
Lsat_1_v5_gn_5_161560 Lactuca sativa HOM05D000886 ORTHO05D000525 1.5e-07 60.1 45 55.6
PSO782G0468 Papaver somniferum HOM05D000886 ORTHO05D000525 1.5e-07 60.1 98 33.7
Peaxi162Scf00975g00016 Petunia axillaris HOM05D000886 ORTHO05D000525 1.5e-07 60.1 100 34.0
Potri.006G031400 Populus trichocarpa HOM05D000886 ORTHO05D000525 1.5e-07 60.1 104 35.6
RcHm_v2.0_Chr5g0073181 Rosa chinensis HOM05D000886 ORTHO05D000525 1.5e-07 60.1 101 38.6
TWI53G1169 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 1.5e-07 60.1 101 34.7
TAR623G1664 Trochodendron aralioides HOM05D000886 ORTHO05D000525 1.5e-07 60.1 103 35.0
ClCG10G016300 Citrullus lanatus HOM05D000886 ORTHO05D000525 1.9e-07 59.7 90 36.7
Eucgr.D02522 Eucalyptus grandis HOM05D000886 ORTHO05D000525 1.9e-07 59.7 103 34.0
Nitab4.5_0000699g0130 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.9e-07 59.7 103 35.9
PSO017G6831 Papaver somniferum HOM05D000886 ORTHO05D000525 1.9e-07 59.7 97 33.0
Peaxi162Scf00975g10015 Petunia axillaris HOM05D000886 ORTHO05D000525 1.9e-07 59.7 104 33.7
Ciclev10012328m.g Citrus clementina HOM05D000886 ORTHO05D000525 2.5e-07 59.3 103 36.9
Eucgr.D02516 Eucalyptus grandis HOM05D000886 ORTHO05D000525 2.5e-07 59.3 103 34.0
CSS0042968 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 3.3e-07 58.9 42 59.5
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 3.3e-07 58.9 103 37.9
Potri.016G028700 Populus trichocarpa HOM05D000886 ORTHO05D000525 3.3e-07 58.9 104 36.5
vmacro08978 Vaccinium macrocarpon HOM05D000886 ORTHO05D000525 3.3e-07 58.9 93 37.6
FvH4_3g40510 Fragaria vesca HOM05D000886 ORTHO05D000525 4.3e-07 58.5 101 35.6
FAN11G3456 Fragaria x ananassa HOM05D000886 ORTHO05D000525 4.3e-07 58.5 101 35.6
FAN16G2738 Fragaria x ananassa HOM05D000886 ORTHO05D000525 4.3e-07 58.5 101 35.6
PSO761G0004 Papaver somniferum HOM05D000886 ORTHO05D000525 4.3e-07 58.5 98 34.7
SalBow6G6665 Salvia bowleyana HOM05D000886 ORTHO05D000525 5.6e-07 58.2 105 34.3
Sed0011417 Sechium edule HOM05D000886 ORTHO05D000525 5.6e-07 58.2 101 33.7
TAR623G1595 Trochodendron aralioides HOM05D000886 ORTHO05D000525 5.6e-07 58.2 103 35.9
VMungo0647G0937 Vigna mungo HOM05D000886 ORTHO05D000525 5.6e-07 58.2 93 36.6
ECA232G0102 Erigeron canadensis HOM05D000886 ORTHO05D000525 7.3e-07 57.8 43 53.5
Eucgr.C04094 Eucalyptus grandis HOM05D000886 ORTHO05D000525 9.6e-07 57.4 103 35.0
Prupe.4G179100 Prunus persica HOM05D000886 ORTHO05D000525 9.6e-07 57.4 101 35.6
TAR374G1684 Trochodendron aralioides HOM05D000886 ORTHO05D000525 9.6e-07 57.4 103 32.0
Ca_09165_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.3e-06 57.0 104 31.7
FAN25G0223 Fragaria x ananassa HOM05D000886 ORTHO05D000525 1.3e-06 57.0 101 35.6
QL07p013665 Quercus lobata HOM05D000886 ORTHO05D000525 1.3e-06 57.0 98 33.7
Ca_09162_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.6e-06 56.6 103 33.0
EL10Ac3g07294 Beta vulgaris HOM05D000886 ORTHO05D000525 2.1e-06 56.2 98 35.7
CsaV3_3G040040 Cucumis sativus L. HOM05D000886 ORTHO05D000525 2.1e-06 56.2 103 34.0
HanXRQChr09g0238531 Helianthus annuus HOM05D000886 ORTHO05D000525 2.1e-06 56.2 101 32.7
Lj1g0021355 Lotus japonicus HOM05D000886 ORTHO05D000525 2.1e-06 56.2 98 35.7
Sc25g0005550 Simmondsia chinensis HOM05D000886 ORTHO05D000525 2.1e-06 56.2 103 35.9
SGA_v2.0_scaffold66G22305 Striga asiatica HOM05D000886 ORTHO05D000525 2.1e-06 56.2 102 33.3
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 2.1e-06 56.2 104 31.7
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 2.1e-06 56.2 99 30.3
Lj4C788G2 Lonicera japonica HOM05D000886 ORTHO05D000525 2.8e-06 55.8 103 34.0
MBI18_g35538_MAGBIO Magnolia biondii HOM05D000886 ORTHO05D000525 2.8e-06 55.8 98 35.7
TPR.G1540 Trifolium pratense HOM05D000886 ORTHO05D000525 2.8e-06 55.8 103 28.2
Os01g0737700 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 3.6e-06 55.5 99 31.3
PSO210G1417 Papaver somniferum HOM05D000886 ORTHO05D000525 3.6e-06 55.5 99 30.3
PSO675G0235 Papaver somniferum HOM05D000886 ORTHO05D000525 3.6e-06 55.5 88 34.1
PGSC0003DMG400043401 Solanum tuberosum HOM05D000886 ORTHO05D000525 3.6e-06 55.5 103 37.9
TPR.G1581 Trifolium pratense HOM05D000886 ORTHO05D000525 3.6e-06 55.5 93 33.3
CANSAT56G3317 Cannabis sativa HOM05D000886 ORTHO05D000525 4.8e-06 55.1 103 35.9
CDE12G0614 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 4.8e-06 55.1 100 36.0
Ciclev10012747m.g Citrus clementina HOM05D000886 ORTHO05D000525 4.8e-06 55.1 102 35.3
Peaxi162Scf00011g01434 Petunia axillaris HOM05D000886 ORTHO05D000525 4.8e-06 55.1 94 36.2
Sabra06G0021000 Salix brachista HOM05D000886 ORTHO05D000525 4.8e-06 55.1 104 33.7
Manes.08G161900 Manihot esculenta HOM05D000886 ORTHO05D000525 6.2e-06 54.7 81 39.5
Os01g0660800 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 6.2e-06 54.7 101 32.7
Sed0018455 Sechium edule HOM05D000886 ORTHO05D000525 6.2e-06 54.7 99 33.3
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 6.2e-06 54.7 99 33.3
Zm00001eb359560 Zea mays HOM05D000886 ORTHO05D000525 6.2e-06 54.7 98 33.7
Nitab4.5_0000296g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 8.1e-06 54.3 106 31.1
TWI74G0322 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 8.1e-06 54.3 101 35.6


User provided reference genes

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