Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold188G40310 Striga asiatica HOM05D000122 ORTHO05D000139 2.6e-53 211.8 113 100.0
SGA_v2.0_scaffold66G22510 Striga asiatica HOM05D000122 ORTHO05D000139 1.4e-09 66.6 40 85.0
Oeu052229.1 Olea europaea HOM05D000122 ORTHO05D000139 2.9e-07 58.9 40 80.0
Solyc07g006510.3 Solanum lycopersicum HOM05D000122 ORTHO05D000139 3.7e-07 58.5 40 77.5
Sopen07g002590 Solanum pennellii HOM05D000122 ORTHO05D000139 3.7e-07 58.5 40 77.5
HPP92_018532 Vanilla planifolia HOM05D000122 ORTHO05D000139 4.9e-07 58.2 40 75.0
EL10Ac7g17193 Beta vulgaris HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 72.5
DCAR_020108 Daucus carota HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
Nitab4.5_0000244g0030 Nicotiana tabacum HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
Nitab4.5_0008689g0010 Nicotiana tabacum HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
Nitab4.5_0009672g0020 Nicotiana tabacum HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
PSO063G4381 Papaver somniferum HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
PSO782G0391 Papaver somniferum HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
Peaxi162Scf00457g00214 Petunia axillaris HOM05D000122 ORTHO05D000139 6.4e-07 57.8 40 77.5
Actinidia24029 Actinidia chinensis HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
Cc06_g13820 Coffea canephora HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
Gohir.A05G345824 Gossypium hirsutum HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
Gohir.D04G085733 Gossypium hirsutum HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
Gorai.012G095800 Gossypium raimondii HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
Thecc.09G163200 Theobroma cacao HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
TAR625G0797 Trochodendron aralioides HOM05D000122 ORTHO05D000139 8.3e-07 57.4 40 77.5
MBI15_g26082_MAGBIO Magnolia biondii HOM05D000122 ORTHO05D000139 1.1e-06 57.0 40 77.5
QL12p025594 Quercus lobata HOM05D000122 ORTHO05D000139 1.1e-06 57.0 40 75.0
Rhsim01G0009800 Rhododendron simsii HOM05D000122 ORTHO05D000139 1.1e-06 57.0 40 77.5
vmacro13082 Vaccinium macrocarpon HOM05D000122 ORTHO05D000139 1.1e-06 57.0 40 77.5
ATR0580G297 Amborella trichopoda HOM05D000122 ORTHO05D000139 1.4e-06 56.6 40 77.5
Aqoxy7G03197 Aquilegia oxysepala HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
AL7G21790 Arabidopsis lyrata HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
AT4G30360 Arabidopsis thaliana HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
arahy.Tifrunner.gnm1.ann1.ER4F5E Arachis hypogaea HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
BcaC09g51824 Brassica carinata HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
BcaNung02995 Brassica carinata HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
A01p07800 Brassica napus HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
C01p08690 Brassica napus HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
BolC1t00853H Brassica oleracea HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
BraA01t00724Z Brassica rapa HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
CSS0047051 Camellia sinensis var. sinensis HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
CAN.G480.9 Capsicum annuum HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 77.5
CARHR238260 Cardamine hirsuta HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Cpa.g.sc23.37 Carica papaya HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Cpa.g.sc75.8 Carica papaya HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Ca_15647_v3 Cicer arietinum L. HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Ca_15649_v3 Cicer arietinum L. HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Thhalv10024525m.g Eutrema salsugineum HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Glyma.06G077600 Glycine max HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Lj1g0025664 Lotus japonicus HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Nn8g40278 Nelumbo nucifera HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Nitab4.5_0001942g0050 Nicotiana tabacum HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 77.5
Peaxi162Scf00213g00930 Petunia axillaris HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 77.5
Phvul.009G102100 Phaseolus vulgaris HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
PGSC0003DMG400000740 Solanum tuberosum HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
PGSC0003DMG400027450 Solanum tuberosum HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
PGSC0003DMG400031714 Solanum tuberosum HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
THA.LOC104819983 Tarenaya hassleriana HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
VMungo1309G2197 Vigna mungo HOM05D000122 ORTHO05D000139 1.9e-06 56.2 40 75.0
Aa31LG2G20170 Aethionema arabicum HOM05D000122 ORTHO05D000139 2.4e-06 55.8 40 67.5
Ciclev10007594m.g Citrus clementina HOM05D000122 ORTHO05D000139 2.4e-06 55.8 40 75.0
Dinv01456 Davidia involucrata HOM05D000122 ORTHO05D000139 2.4e-06 55.8 40 75.0
MBI14_g30704_MAGBIO Magnolia biondii HOM05D000122 ORTHO05D000139 2.4e-06 55.8 40 75.0
PGR102G3232 Punica granatum HOM05D000122 ORTHO05D000139 2.4e-06 55.8 40 75.0
Duzib168G0817 Durio zibethinus HOM05D000122 ORTHO05D000139 3.2e-06 55.5 40 75.0
GSVIVG01033170001 Vitis vinifera HOM05D000122 ORTHO05D000139 3.2e-06 55.5 40 75.0
CAN.G584.42 Capsicum annuum HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 75.0
Duzib168G1148 Durio zibethinus HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 72.5
ECA240G1776 Erigeron canadensis HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 75.0
Migut.E01427 Erythranthe guttata HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 75.0
HanXRQChr03g0080851 Helianthus annuus HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 75.0
Prupe.1G095400 Prunus persica HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 72.5
Sabra06G0210800 Salix brachista HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 75.0
SGA_v2.0_scaffold169G38592 Striga asiatica HOM05D000122 ORTHO05D000139 4.1e-06 55.1 40 75.0
Carub.0007s1024 Capsella rubella HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Cfa013292 Carpinus fangiana HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
AUR62036779 Chenopodium quinoa HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 67.5
Haze_21769 Corylus avellana HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
MELO3C003617.2 Cucumis melo HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
CsaV3_3G047190 Cucumis sativus L. HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Dinv42769 Davidia involucrata HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 75.0
Dinv43334 Davidia involucrata HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 75.0
Eucgr.C02438 Eucalyptus grandis HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Glyma.04G181000 Glycine max HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 65.0
Gohir.A06G104600 Gossypium hirsutum HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Gohir.D06G106700 Gossypium hirsutum HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Gorai.010G121000 Gossypium raimondii HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Nitab4.5_0005058g0030 Nicotiana tabacum HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 75.0
Oeu018554.2 Olea europaea HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
Oeu054245.2 Olea europaea HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 75.0
Thecc.09G009200 Theobroma cacao HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 72.5
TAR383G0520 Trochodendron aralioides HOM05D000122 ORTHO05D000139 5.4e-06 54.7 40 75.0
Duzib187G0198 Durio zibethinus HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 75.0
Lj9A729G38 Lonicera japonica HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 72.5
Lalb_Chr23g0275561 Lupinus albus HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 70.0
MD13G1261400 Malus domestica HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 72.5
MD16G1264100 Malus domestica HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 72.5
Medtr3g109030 Medicago truncatula HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 72.5
SalBow6G0494 Salvia bowleyana HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 75.0
SalBow6G6912 Salvia bowleyana HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 75.0
Solyc08g069140.4 Solanum lycopersicum HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 75.0
Sopen08g022780 Solanum pennellii HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 75.0
PGSC0003DMG400029552 Solanum tuberosum HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 75.0
TPR.G12480 Trifolium pratense HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 72.5
TWI34G1583 Tripterygium wilfordii HOM05D000122 ORTHO05D000139 7.1e-06 54.3 40 72.5
Aa31LG6G5320 Aethionema arabicum HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5
Aa31sc60G140 Aethionema arabicum HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5
CiPaw.08G039400 Carya illinoinensis HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5
Gohir.D13G186800 Gossypium hirsutum HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 70.0
Gorai.010G245300 Gossypium raimondii HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 70.0
Lalb_Chr08g0243501 Lupinus albus HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5
Potri.006G271480 Populus trichocarpa HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5
Sp7g28230 Schrenkiella parvula HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5
Sed0015334 Sechium edule HOM05D000122 ORTHO05D000139 9.2e-06 53.9 40 72.5


User provided reference genes

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