Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 1.3e-165 586.3 291 100.0
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 2.8e-14 83.6 103 46.6
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 5.3e-13 79.3 103 43.7
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.1e-10 71.6 99 41.4
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.5e-10 70.5 99 41.4
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 3.2e-10 70.1 99 41.4
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 5.5e-10 69.3 102 38.2
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 9.3e-10 68.6 95 42.1
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 9.3e-10 68.6 99 38.4
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 2.1e-09 67.4 103 35.9
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 2.1e-09 67.4 101 38.6
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 6.0e-09 65.9 97 37.1
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 7.9e-09 65.5 101 38.6
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 7.9e-09 65.5 97 37.1
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 1.3e-08 64.7 99 38.4
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 2.3e-08 63.9 97 36.1
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 2.3e-08 63.9 97 35.1
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 3.0e-08 63.5 99 37.4
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 3.0e-08 63.5 99 37.4
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.0e-08 63.5 102 33.3
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 6.7e-08 62.4 99 36.4
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 6.7e-08 62.4 49 55.1
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 8.7e-08 62.0 100 41.0
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.1e-07 61.6 103 37.9
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.5e-07 61.2 102 36.3
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.5e-07 61.2 102 36.3
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 1.9e-07 60.8 99 36.4
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.9e-07 60.8 97 39.2
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.3e-07 60.1 101 37.6
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 3.3e-07 60.1 97 38.1
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 3.3e-07 60.1 97 38.1
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.3e-07 59.7 98 34.7
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.3e-07 59.7 98 34.7
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 4.3e-07 59.7 102 34.3
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 5.7e-07 59.3 99 36.4
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 5.7e-07 59.3 97 35.1
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 9.6e-07 58.5 99 37.4
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 9.6e-07 58.5 98 37.8
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 9.6e-07 58.5 102 33.3
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.3e-06 58.2 100 33.0
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 1.6e-06 57.8 99 35.4
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.6e-06 57.8 101 33.7
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 2.8e-06 57.0 99 35.4
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 3.7e-06 56.6 97 34.0
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 6.2e-06 55.8 98 36.7
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 8.2e-06 55.5 99 36.4
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 8.2e-06 55.5 97 33.0


User provided reference genes

Program Settings