Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold187G40255 Striga asiatica HOM05D003538 ORTHO05D004376 4.9e-185 651.0 327 100.0
MSTRG.11666 Avicennia marina HOM05D003538 ORTHO05D004376 2.9e-36 156.8 290 40.3
SalBow4G1879 Salvia bowleyana HOM05D003538 ORTHO05D004376 4.2e-35 152.9 293 36.5
Migut.A00144 Erythranthe guttata HOM05D003538 ORTHO05D004376 1.2e-29 134.8 138 51.4
Peaxi162Scf00136g00059 Petunia axillaris HOM05D003538 ORTHO05D004376 6.8e-25 119.0 147 47.6
Sopen08g019050 Solanum pennellii HOM05D003538 ORTHO05D004376 1.2e-24 118.2 147 47.6
PGSC0003DMG400002203 Solanum tuberosum HOM05D003538 ORTHO05D004376 5.7e-24 115.9 147 46.3
Solyc08g065440.4 Solanum lycopersicum HOM05D003538 ORTHO05D004376 4.8e-23 112.8 138 47.1
Nitab4.5_0001179g0130 Nicotiana tabacum HOM05D003538 ORTHO05D004376 7.0e-22 109.0 155 43.2
Nitab4.5_0001584g0040 Nicotiana tabacum HOM05D003538 ORTHO05D004376 1.6e-21 107.8 154 42.2
Oeu018651.1 Olea europaea HOM05D003538 ORTHO05D004376 7.7e-21 105.5 176 40.3
TAR626G0286 Trochodendron aralioides HOM05D003538 ORTHO05D004376 6.5e-20 102.4 155 41.9
GSVIVG01035358001 Vitis vinifera HOM05D003538 ORTHO05D004376 7.2e-19 99.0 139 38.1
CSS0001901 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 9.4e-19 98.6 148 40.5
Cc08_g10420 Coffea canephora HOM05D003538 ORTHO05D004376 9.4e-19 98.6 146 42.5
Lj7C279G1 Lonicera japonica HOM05D003538 ORTHO05D004376 2.7e-18 97.1 149 40.3
vmacro00153 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 4.7e-18 96.3 196 33.7
Hma1.2p1_0482F.1_g162640 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 8.0e-18 95.5 100 49.0
Rhsim11G0045200 Rhododendron simsii HOM05D003538 ORTHO05D004376 8.0e-18 95.5 148 39.2
Duzib168G2161 Durio zibethinus HOM05D003538 ORTHO05D004376 1.8e-17 94.4 125 41.6
Atru.chr7.1041 Acer truncatum HOM05D003538 ORTHO05D004376 2.3e-17 94.0 148 38.5
Actinidia30305 Actinidia chinensis HOM05D003538 ORTHO05D004376 3.0e-17 93.6 125 37.6
GSVIVG01015234001 Vitis vinifera HOM05D003538 ORTHO05D004376 3.0e-17 93.6 158 37.3
Gohir.A05G043100 Gossypium hirsutum HOM05D003538 ORTHO05D004376 8.8e-17 92.0 125 40.8
Potri.006G230900 Populus trichocarpa HOM05D003538 ORTHO05D004376 8.8e-17 92.0 148 37.2
Dinv36743 Davidia involucrata HOM05D003538 ORTHO05D004376 1.2e-16 91.7 152 36.8
CANSAT25G2654 Cannabis sativa HOM05D003538 ORTHO05D004376 1.5e-16 91.3 125 37.6
QL02p001408 Quercus lobata HOM05D003538 ORTHO05D004376 2.0e-16 90.9 152 36.2
Gorai.009G045900 Gossypium raimondii HOM05D003538 ORTHO05D004376 3.4e-16 90.1 125 40.0
Ciclev10007991m.g Citrus clementina HOM05D003538 ORTHO05D004376 4.4e-16 89.7 125 38.4
QL02p063126 Quercus lobata HOM05D003538 ORTHO05D004376 5.7e-16 89.4 142 38.0
Actinidia01196 Actinidia chinensis HOM05D003538 ORTHO05D004376 1.7e-15 87.8 150 36.0
CiPaw.04G152000 Carya illinoinensis HOM05D003538 ORTHO05D004376 1.7e-15 87.8 142 38.7
PSO210G5813 Papaver somniferum HOM05D003538 ORTHO05D004376 3.7e-15 86.7 155 36.1
Cfa003115 Carpinus fangiana HOM05D003538 ORTHO05D004376 8.3e-15 85.5 142 37.3
Ciclev10007935m.g Citrus clementina HOM05D003538 ORTHO05D004376 1.1e-14 85.1 136 36.0
ClCG03G015790 Citrullus lanatus HOM05D003538 ORTHO05D004376 1.8e-14 84.3 137 37.2
CiPaw.16G029300 Carya illinoinensis HOM05D003538 ORTHO05D004376 2.4e-14 84.0 131 37.4
Haze_25885 Corylus avellana HOM05D003538 ORTHO05D004376 3.1e-14 83.6 142 37.3
Nn6g35422 Nelumbo nucifera HOM05D003538 ORTHO05D004376 3.1e-14 83.6 147 36.1
Prupe.7G213400 Prunus persica HOM05D003538 ORTHO05D004376 4.1e-14 83.2 157 32.5
MD02G1074500 Malus domestica HOM05D003538 ORTHO05D004376 7.0e-14 82.4 142 36.6
RcHm_v2.0_Chr2g0092961 Rosa chinensis HOM05D003538 ORTHO05D004376 9.1e-14 82.0 157 33.1
Sed0013907 Sechium edule HOM05D003538 ORTHO05D004376 9.1e-14 82.0 183 31.1
Actinidia29888 Actinidia chinensis HOM05D003538 ORTHO05D004376 1.2e-13 81.6 142 35.9
PSO210G6318 Papaver somniferum HOM05D003538 ORTHO05D004376 1.2e-13 81.6 132 35.6
CSS0008213 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 1.6e-13 81.3 142 36.6
COL.COLO4_21041 Corchorus olitorius HOM05D003538 ORTHO05D004376 1.6e-13 81.3 125 36.8
PGR044G1201 Punica granatum HOM05D003538 ORTHO05D004376 1.6e-13 81.3 139 34.5
MBI03_g13775_MAGBIO Magnolia biondii HOM05D003538 ORTHO05D004376 2.0e-13 80.9 141 38.3
Oeu039611.1 Olea europaea HOM05D003538 ORTHO05D004376 2.0e-13 80.9 137 32.1
TWI32G0386 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 2.7e-13 80.5 177 30.5
DCAR_011998 Daucus carota HOM05D003538 ORTHO05D004376 3.5e-13 80.1 131 35.9
FvH4_1g07060 Fragaria vesca HOM05D003538 ORTHO05D004376 3.5e-13 80.1 157 31.2
FAN19G1852 Fragaria x ananassa HOM05D003538 ORTHO05D004376 3.5e-13 80.1 157 31.2
Glyma.01G003600 Glycine max HOM05D003538 ORTHO05D004376 3.5e-13 80.1 111 36.9
Glyma.07G128300 Glycine max HOM05D003538 ORTHO05D004376 7.7e-13 79.0 139 34.5
VMungo0647G0716 Vigna mungo HOM05D003538 ORTHO05D004376 7.7e-13 79.0 112 39.3
MELO3C016862.2 Cucumis melo HOM05D003538 ORTHO05D004376 1.0e-12 78.6 168 32.1
Lsat_1_v5_gn_3_24260 Lactuca sativa HOM05D003538 ORTHO05D004376 1.0e-12 78.6 216 31.5
TPR.G13110 Trifolium pratense HOM05D003538 ORTHO05D004376 1.0e-12 78.6 147 34.0
Eucgr.C03022 Eucalyptus grandis HOM05D003538 ORTHO05D004376 1.3e-12 78.2 140 35.0
Gorai.001G010900 Gossypium raimondii HOM05D003538 ORTHO05D004376 1.3e-12 78.2 195 28.2
Ca_13176_v3 Cicer arietinum L. HOM05D003538 ORTHO05D004376 1.7e-12 77.8 146 34.2
Thecc.09G092900 Theobroma cacao HOM05D003538 ORTHO05D004376 2.3e-12 77.4 151 33.8
Aqoxy7G04069 Aquilegia oxysepala HOM05D003538 ORTHO05D004376 2.9e-12 77.0 145 35.9
Glyma.14G093500 Glycine max HOM05D003538 ORTHO05D004376 2.9e-12 77.0 113 38.9
CsaV3_4G035550 Cucumis sativus L. HOM05D003538 ORTHO05D004376 3.8e-12 76.6 144 34.7
Gohir.D07G010500 Gossypium hirsutum HOM05D003538 ORTHO05D004376 3.8e-12 76.6 195 28.2
Phvul.001G034000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 3.8e-12 76.6 110 38.2
Sc23g0005570 Simmondsia chinensis HOM05D003538 ORTHO05D004376 3.8e-12 76.6 214 27.1
MELO3C015449.2 Cucumis melo HOM05D003538 ORTHO05D004376 5.0e-12 76.3 147 34.7
Glyma.17G230200 Glycine max HOM05D003538 ORTHO05D004376 5.0e-12 76.3 112 39.3
Sed0023083 Sechium edule HOM05D003538 ORTHO05D004376 5.0e-12 76.3 139 35.3
Solyc07g032260.3 Solanum lycopersicum HOM05D003538 ORTHO05D004376 5.0e-12 76.3 157 29.3
TWI34G1305 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 5.0e-12 76.3 126 38.1
FAN23G1479 Fragaria x ananassa HOM05D003538 ORTHO05D004376 6.6e-12 75.9 141 30.5
CsaV3_1G040220 Cucumis sativus L. HOM05D003538 ORTHO05D004376 8.6e-12 75.5 142 34.5
CsaV3_UNG062480 Cucumis sativus L. HOM05D003538 ORTHO05D004376 8.6e-12 75.5 142 34.5
HanXRQChr06g0173831 Helianthus annuus HOM05D003538 ORTHO05D004376 8.6e-12 75.5 182 31.3
vmacro06276 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 8.6e-12 75.5 155 32.9
Hund03347 Selenicereus undatus HOM05D003538 ORTHO05D004376 1.1e-11 75.1 216 27.3
Rhsim03G0234300 Rhododendron simsii HOM05D003538 ORTHO05D004376 1.5e-11 74.7 142 35.9
Atru.chr7.1545 Acer truncatum HOM05D003538 ORTHO05D004376 1.9e-11 74.3 136 34.6
ECA246G1935 Erigeron canadensis HOM05D003538 ORTHO05D004376 1.9e-11 74.3 174 29.3
FAN26G3060 Fragaria x ananassa HOM05D003538 ORTHO05D004376 1.9e-11 74.3 141 31.2
Lj7A672T62 Lonicera japonica HOM05D003538 ORTHO05D004376 1.9e-11 74.3 138 36.2
Lj5g0027111 Lotus japonicus HOM05D003538 ORTHO05D004376 1.9e-11 74.3 108 39.8
Phvul.004G172000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 1.9e-11 74.3 111 35.1
ClCG05G017780 Citrullus lanatus HOM05D003538 ORTHO05D004376 3.3e-11 73.6 123 34.1
CDE02G0844 Ceratophyllum demersum HOM05D003538 ORTHO05D004376 5.6e-11 72.8 148 30.4
Eucgr.C03664 Eucalyptus grandis HOM05D003538 ORTHO05D004376 7.2e-11 72.4 133 34.6
Medtr1g016740 Medicago truncatula HOM05D003538 ORTHO05D004376 7.2e-11 72.4 124 35.5
Sed0020375 Sechium edule HOM05D003538 ORTHO05D004376 7.2e-11 72.4 155 32.3
Manes.03G031601 Manihot esculenta HOM05D003538 ORTHO05D004376 9.5e-11 72.0 147 32.0
DCAR_004434 Daucus carota HOM05D003538 ORTHO05D004376 1.2e-10 71.6 148 37.8
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea HOM05D003538 ORTHO05D004376 1.6e-10 71.2 219 29.7
Lj2g0016122 Lotus japonicus HOM05D003538 ORTHO05D004376 2.8e-10 70.5 145 33.8
CANSAT56G3152 Cannabis sativa HOM05D003538 ORTHO05D004376 3.6e-10 70.1 141 33.3
Ah.11g044700 Amaranthus hybridus HOM05D003538 ORTHO05D004376 8.0e-10 68.9 132 28.0
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea HOM05D003538 ORTHO05D004376 8.0e-10 68.9 112 33.9
Eucgr.L03304 Eucalyptus grandis HOM05D003538 ORTHO05D004376 1.0e-09 68.6 92 38.0
Manes.03G034901 Manihot esculenta HOM05D003538 ORTHO05D004376 1.0e-09 68.6 131 31.3
Sabra06G0179100 Salix brachista HOM05D003538 ORTHO05D004376 1.4e-09 68.2 193 28.0
Duzib168G1022 Durio zibethinus HOM05D003538 ORTHO05D004376 1.8e-09 67.8 139 31.7
HPP92_009156 Vanilla planifolia HOM05D003538 ORTHO05D004376 1.8e-09 67.8 127 33.1
VMungo0464G1250 Vigna mungo HOM05D003538 ORTHO05D004376 1.8e-09 67.8 114 32.5
arahy.Tifrunner.gnm1.ann1.60DKDN Arachis hypogaea HOM05D003538 ORTHO05D004376 2.3e-09 67.4 127 29.9
arahy.Tifrunner.gnm1.ann1.X6QCD5 Arachis hypogaea HOM05D003538 ORTHO05D004376 3.0e-09 67.0 156 28.8
EL10Ac2g03914 Beta vulgaris HOM05D003538 ORTHO05D004376 3.0e-09 67.0 99 34.3
Cpa.g.sc7.246 Carica papaya HOM05D003538 ORTHO05D004376 4.0e-09 66.6 131 34.4
SalBow1G0256 Salvia bowleyana HOM05D003538 ORTHO05D004376 5.2e-09 66.2 142 27.5
Haze_18202 Corylus avellana HOM05D003538 ORTHO05D004376 6.8e-09 65.9 116 35.3
Lalb_Chr22g0356041 Lupinus albus HOM05D003538 ORTHO05D004376 1.2e-08 65.1 104 39.4
Os01g0600300 Oryza sativa ssp. japonica HOM05D003538 ORTHO05D004376 1.5e-08 64.7 121 34.7
Gohir.D05G044800 Gossypium hirsutum HOM05D003538 ORTHO05D004376 2.6e-08 63.9 105 37.1
Thecc.09G052400 Theobroma cacao HOM05D003538 ORTHO05D004376 4.4e-08 63.2 102 36.3
Medtr6g091790 Medicago truncatula HOM05D003538 ORTHO05D004376 3.7e-07 60.1 122 30.3
ATR0789G133 Amborella trichopoda HOM05D003538 ORTHO05D004376 8.3e-07 58.9 128 29.7
Medtr6g091900 Medicago truncatula HOM05D003538 ORTHO05D004376 1.1e-06 58.5 158 28.5
Zm00001eb161340 Zea mays HOM05D003538 ORTHO05D004376 1.1e-06 58.5 143 32.2
Psat6g019320 Pisum sativum HOM05D003538 ORTHO05D004376 3.2e-06 57.0 105 34.3


User provided reference genes

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