Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold187G40246 Striga asiatica HOM05D001443 ORTHO05D001352 1.7e-147 526.2 296 100.0
Migut.A00146 Erythranthe guttata HOM05D001443 ORTHO05D001352 2.6e-23 113.6 320 42.2
CSS0046346 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 7.5e-23 112.1 302 41.4
PGSC0003DMG400029301 Solanum tuberosum HOM05D001443 ORTHO05D001352 5.4e-21 105.9 383 34.7
Lj7C280G0 Lonicera japonica HOM05D001443 ORTHO05D001352 7.0e-21 105.5 385 36.1
Sopen12g031850 Solanum pennellii HOM05D001443 ORTHO05D001352 7.0e-21 105.5 382 34.6
Solyc12g095960.3 Solanum lycopersicum HOM05D001443 ORTHO05D001352 3.5e-20 103.2 371 34.8
CAN.G208.76 Capsicum annuum HOM05D001443 ORTHO05D001352 4.5e-20 102.8 394 36.3
TWI34G1891 Tripterygium wilfordii HOM05D001443 ORTHO05D001352 4.5e-20 102.8 274 37.2
Eucgr.C03020 Eucalyptus grandis HOM05D001443 ORTHO05D001352 1.3e-19 101.3 283 36.4
Migut.E01558 Erythranthe guttata HOM05D001443 ORTHO05D001352 3.8e-19 99.8 345 34.8
CSS0045360 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 6.5e-19 99.0 244 38.9
Duzib150G1159 Durio zibethinus HOM05D001443 ORTHO05D001352 1.5e-18 97.8 289 37.4
arahy.Tifrunner.gnm1.ann1.1JP5NC Arachis hypogaea HOM05D001443 ORTHO05D001352 4.2e-18 96.3 287 35.2
arahy.Tifrunner.gnm1.ann1.WC628Y Arachis hypogaea HOM05D001443 ORTHO05D001352 5.5e-18 95.9 287 35.2
ECA233G0783 Erigeron canadensis HOM05D001443 ORTHO05D001352 9.5e-18 95.1 310 38.7
CiPaw.16G029700 Carya illinoinensis HOM05D001443 ORTHO05D001352 1.2e-17 94.7 307 35.5
THA.LOC104818574 Tarenaya hassleriana HOM05D001443 ORTHO05D001352 1.2e-17 94.7 95 58.9
Duzib168G0433 Durio zibethinus HOM05D001443 ORTHO05D001352 1.6e-17 94.4 285 40.4
Prupe.1G414200 Prunus persica HOM05D001443 ORTHO05D001352 1.6e-17 94.4 318 38.4
Dinv27972 Davidia involucrata HOM05D001443 ORTHO05D001352 2.8e-17 93.6 318 36.8
CSS0000793 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 3.6e-17 93.2 244 36.9
Thhalv10001945m.g Eutrema salsugineum HOM05D001443 ORTHO05D001352 4.7e-17 92.8 290 34.5
FvH4_2g32110 Fragaria vesca HOM05D001443 ORTHO05D001352 6.1e-17 92.4 275 37.8
QL02p001442 Quercus lobata HOM05D001443 ORTHO05D001352 6.1e-17 92.4 92 57.6
Glyma.14G093200 Glycine max HOM05D001443 ORTHO05D001352 1.0e-16 91.7 326 34.4
CiPaw.16G029500 Carya illinoinensis HOM05D001443 ORTHO05D001352 1.8e-16 90.9 323 36.2
Oeu018652.2 Olea europaea HOM05D001443 ORTHO05D001352 1.8e-16 90.9 258 36.8
Atru.chr7.1037 Acer truncatum HOM05D001443 ORTHO05D001352 2.3e-16 90.5 114 54.4
FAN24G0735 Fragaria x ananassa HOM05D002015 ORTHO05D001352 3.0e-16 90.1 272 37.5
Haze_18206 Corylus avellana HOM05D001443 ORTHO05D001352 5.2e-16 89.4 121 52.9
MBI04_g37934_MAGBIO Magnolia biondii HOM05D001443 ORTHO05D001352 5.2e-16 89.4 290 37.6
Os02g0224300 Oryza sativa ssp. japonica HOM05D001443 ORTHO05D001352 1.2e-15 88.2 116 51.7
Oeu029405.1 Olea europaea HOM05D001443 ORTHO05D001352 1.5e-15 87.8 337 33.8
Cc08_g10400 Coffea canephora HOM05D001443 ORTHO05D001352 2.0e-15 87.4 296 42.9
Lju3103C0G13 Lonicera japonica HOM05D001443 ORTHO05D001352 3.4e-15 86.7 292 37.3
Aa31LG5G9730 Aethionema arabicum HOM05D001443 ORTHO05D001352 5.7e-15 85.9 97 51.5
Manes.16G078700 Manihot esculenta HOM05D001443 ORTHO05D001352 5.7e-15 85.9 324 32.4
Cfa017941 Carpinus fangiana HOM05D001443 ORTHO05D001352 7.5e-15 85.5 105 57.1
FAN27G1512 Fragaria x ananassa HOM05D001443 ORTHO05D001352 7.5e-15 85.5 294 37.1
Potri.006G231800 Populus trichocarpa HOM05D001443 ORTHO05D001352 9.8e-15 85.1 277 40.8
FAN20G1898 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.3e-14 84.7 294 36.4
MBI01_g02268_MAGBIO Magnolia biondii HOM05D001443 ORTHO05D001352 1.3e-14 84.7 126 52.4
SGA_v2.0_scaffold88G27221 Striga asiatica HOM05D001443 ORTHO05D001352 1.3e-14 84.7 302 40.4
FAN15G3039 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.7e-14 84.3 297 41.8
Potri.018G055300 Populus trichocarpa HOM05D001443 ORTHO05D001352 1.7e-14 84.3 292 38.0
CsaV3_2G025660 Cucumis sativus L. HOM05D001443 ORTHO05D001352 2.2e-14 84.0 336 35.7
Nitab4.5_0001179g0110 Nicotiana tabacum HOM05D001443 ORTHO05D001352 2.8e-14 83.6 273 33.7
vmacro00155 Vaccinium macrocarpon HOM05D001443 ORTHO05D001352 2.8e-14 83.6 287 35.5
TAR383G0280 Trochodendron aralioides HOM05D001443 ORTHO05D001352 3.7e-14 83.2 278 35.3
MELO3C010761.2 Cucumis melo HOM05D001443 ORTHO05D001352 4.9e-14 82.8 335 32.8
Medtr3g104280 Medicago truncatula HOM05D001443 ORTHO05D001352 4.9e-14 82.8 313 33.5
arahy.Tifrunner.gnm1.ann1.7QGM13 Arachis hypogaea HOM05D001443 ORTHO05D001352 1.1e-13 81.6 275 35.3
Nitab4.5_0009587g0010 Nicotiana tabacum HOM05D001443 ORTHO05D001352 1.1e-13 81.6 339 32.7
Zm00001eb205070 Zea mays HOM05D001443 ORTHO05D001352 1.1e-13 81.6 103 57.3
Ciclev10007663m.g Citrus clementina HOM05D001443 ORTHO05D001352 1.4e-13 81.3 307 38.4
RcHm_v2.0_Chr6g0310631 Rosa chinensis HOM05D001443 ORTHO05D001352 1.8e-13 80.9 325 35.1
Sp4g05870 Schrenkiella parvula HOM05D001443 ORTHO05D001352 1.8e-13 80.9 268 34.3
Actinidia18193 Actinidia chinensis HOM05D001443 ORTHO05D001352 3.1e-13 80.1 273 35.5
Lj8C550G1 Lonicera japonica HOM05D001443 ORTHO05D001352 3.1e-13 80.1 272 40.8
Sed0026795 Sechium edule HOM05D001443 ORTHO05D001352 4.1e-13 79.7 292 34.6
PSO063G2194 Papaver somniferum HOM05D001443 ORTHO05D001352 9.2e-13 78.6 291 38.8
TPR.G13013 Trifolium pratense HOM05D001443 ORTHO05D001352 9.2e-13 78.6 100 52.0
Lj5g0018193 Lotus japonicus HOM05D001443 ORTHO05D001352 1.2e-12 78.2 121 50.4
Nitab4.5_0001584g0060 Nicotiana tabacum HOM05D001443 ORTHO05D001352 1.6e-12 77.8 260 32.7
VMungo1309G3077 Vigna mungo HOM05D001443 ORTHO05D001352 1.6e-12 77.8 300 33.3
Lalb_Chr14g0367811 Lupinus albus HOM05D001443 ORTHO05D001352 2.0e-12 77.4 318 34.3
Rhsim11G0045600 Rhododendron simsii HOM05D001443 ORTHO05D001352 2.0e-12 77.4 370 34.6
Zm00001eb239890 Zea mays HOM05D001443 ORTHO05D001352 2.0e-12 77.4 102 55.9
Glyma.17G230300 Glycine max HOM05D001443 ORTHO05D001352 3.5e-12 76.6 312 36.5
Gohir.A05G043300 Gossypium hirsutum HOM05D001443 ORTHO05D001352 3.5e-12 76.6 309 33.7
Thecc.09G052100 Theobroma cacao HOM05D001443 ORTHO05D001352 3.5e-12 76.6 340 36.5
Actinidia14705 Actinidia chinensis HOM05D001443 ORTHO05D001352 5.9e-12 75.9 87 54.0
Gohir.A06G088300 Gossypium hirsutum HOM05D001443 ORTHO05D001352 5.9e-12 75.9 305 37.4
Lalb_Chr22g0356061 Lupinus albus HOM05D001443 ORTHO05D001352 7.8e-12 75.5 284 35.6
Oeu036343.1 Olea europaea HOM05D001443 ORTHO05D001352 7.8e-12 75.5 283 32.9
TWI32G0683 Tripterygium wilfordii HOM05D001443 ORTHO05D001352 7.8e-12 75.5 249 39.4
Phvul.009G076800 Phaseolus vulgaris HOM05D001443 ORTHO05D001352 1.3e-11 74.7 310 33.9
CANSAT25G0392 Cannabis sativa HOM05D001443 ORTHO05D001352 1.7e-11 74.3 293 34.8
Lalb_Chr24g0399601 Lupinus albus HOM05D001443 ORTHO05D001352 1.7e-11 74.3 344 34.0
Sabra18G0049800 Salix brachista HOM05D001443 ORTHO05D001352 3.8e-11 73.2 300 35.0
Hma1.2p1_0482F.1_g162680 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 5.0e-11 72.8 320 36.2
Medtr1g016760 Medicago truncatula HOM05D001443 ORTHO05D001352 5.0e-11 72.8 287 36.2
Ca_13179_v3 Cicer arietinum L. HOM05D001443 ORTHO05D001352 6.6e-11 72.4 100 50.0
ClCG08G016950 Citrullus lanatus HOM05D001443 ORTHO05D001352 6.6e-11 72.4 247 34.0
Lj1g0011088 Lotus japonicus HOM05D001443 ORTHO05D001352 1.1e-10 71.6 107 48.6
VMungo1309G2260 Vigna mungo HOM05D001443 ORTHO05D001352 1.1e-10 71.6 338 31.7
MD15G1061600 Malus domestica HOM05D001443 ORTHO05D001352 1.9e-10 70.9 344 35.2
Nitab4.5_0000738g0120 Nicotiana tabacum HOM05D001443 ORTHO05D001352 1.9e-10 70.9 334 30.5
PSO832G3656 Papaver somniferum HOM05D001443 ORTHO05D001352 2.5e-10 70.5 327 37.0
Psat0ss1279g0040 Pisum sativum HOM05D001443 ORTHO05D001352 2.5e-10 70.5 294 32.7
Gohir.D05G045000 Gossypium hirsutum HOM05D001443 ORTHO05D001352 4.3e-10 69.7 329 32.2
Gorai.009G046100 Gossypium raimondii HOM05D001443 ORTHO05D001352 4.3e-10 69.7 329 32.2
COL.COLO4_21036 Corchorus olitorius HOM05D001443 ORTHO05D001352 5.6e-10 69.3 324 32.1
Oeu037328.1 Olea europaea HOM05D001443 ORTHO05D001352 5.6e-10 69.3 316 32.0
Dinv23429 Davidia involucrata HOM05D001443 ORTHO05D001352 7.3e-10 68.9 340 34.1
Medtr3g104270 Medicago truncatula HOM05D001443 ORTHO05D001352 9.5e-10 68.6 333 37.2
TAR376G0996 Trochodendron aralioides HOM05D001443 ORTHO05D001352 9.5e-10 68.6 103 46.6
Glyma.06G051200 Glycine max HOM05D001443 ORTHO05D001352 1.2e-09 68.2 299 35.5
Mapoly0006s0255 Marchantia polymorpha HOM05D001443 ORTHO05D001352 1.2e-09 68.2 106 45.3
TAR628G0559 Trochodendron aralioides HOM05D001443 ORTHO05D001352 1.6e-09 67.8 100 48.0
Ca_15868_v3 Cicer arietinum L. HOM05D001443 ORTHO05D001352 2.1e-09 67.4 292 31.5
PGSC0003DMG400002210 Solanum tuberosum HOM05D001443 ORTHO05D001352 2.1e-09 67.4 378 28.8
Gohir.D06G088400 Gossypium hirsutum HOM05D001443 ORTHO05D001352 4.7e-09 66.2 314 35.7
Sopen08g019330 Solanum pennellii HOM05D001443 ORTHO05D001352 6.1e-09 65.9 87 50.6
PSO210G5804 Papaver somniferum HOM05D001443 ORTHO05D001352 8.0e-09 65.5 291 34.7
Gorai.010G102100 Gossypium raimondii HOM05D001443 ORTHO05D001352 1.0e-08 65.1 314 35.7
Hma1.2p1_1944F.1_g308600 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 1.0e-08 65.1 306 35.0
DCAR_004440 Daucus carota HOM05D001443 ORTHO05D001352 1.4e-08 64.7 253 34.4
PGR044G0673 Punica granatum HOM05D001443 ORTHO05D001352 1.4e-08 64.7 276 35.9
QL11p052292 Quercus lobata HOM05D001443 ORTHO05D001352 1.4e-08 64.7 284 32.0
TPR.G3592 Trifolium pratense HOM05D001443 ORTHO05D001352 1.4e-08 64.7 273 42.1
CSS0022594 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 1.8e-08 64.3 336 31.5
Phvul.009G076600 Phaseolus vulgaris HOM05D001443 ORTHO05D001352 3.0e-08 63.5 322 33.2
Psat6g019480 Pisum sativum HOM05D001443 ORTHO05D001352 5.2e-08 62.8 284 36.6
SEGI_30547 Sequoiadendron giganteum HOM05D001443 ORTHO05D001352 1.2e-07 61.6 119 44.5
GSVIVG01035354001 Vitis vinifera HOM05D001443 ORTHO05D001352 1.5e-07 61.2 235 31.1
HPP92_003984 Vanilla planifolia HOM05D001443 ORTHO05D001352 2.0e-07 60.8 100 44.0
AL4G18040 Arabidopsis lyrata HOM05D001443 ORTHO05D001352 2.6e-07 60.5 97 44.3
Cpa.g.sc7.198 Carica papaya HOM05D001443 ORTHO05D001352 4.4e-07 59.7 295 34.6
AUR62022055 Chenopodium quinoa HOM05D001443 ORTHO05D001352 5.7e-07 59.3 266 35.3
HPP92_002838 Vanilla planifolia HOM05D001443 ORTHO05D001352 7.5e-07 58.9 319 30.7
MD08G1044200 Malus domestica HOM05D001443 ORTHO05D001352 9.8e-07 58.5 346 36.1
BolC8t51415H Brassica oleracea HOM05D001443 ORTHO05D001352 3.7e-06 56.6 44 61.4
BraA09t40946Z Brassica rapa HOM05D001443 ORTHO05D001352 3.7e-06 56.6 44 61.4
Hma1.2p1_0450F.1_g155610 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 3.7e-06 56.6 304 31.9
THA.LOC104804517 Tarenaya hassleriana HOM05D001443 ORTHO05D001352 6.4e-06 55.8 237 36.3
TAR624G1164 Trochodendron aralioides HOM05D001443 ORTHO05D001352 8.3e-06 55.5 265 33.2


User provided reference genes

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