Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40236 Striga asiatica HOM05D005165 ORTHO05D006361 3.9e-70 268.1 141 100.0
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 4.5e-58 228.0 155 81.3
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 4.5e-50 201.4 156 71.8
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 4.2e-48 194.9 152 71.7
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 1.0e-41 173.7 155 63.2
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 1.1e-40 170.2 153 63.4
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 1.9e-40 169.5 154 61.0
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 1.9e-40 169.5 154 61.0
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 4.2e-40 168.3 152 60.5
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 7.1e-40 167.5 150 62.7
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 2.1e-39 166.0 153 59.5
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 2.7e-39 165.6 150 62.7
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 2.7e-39 165.6 156 59.6
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 2.7e-39 165.6 158 58.2
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 7.9e-39 164.1 153 59.5
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 7.9e-39 164.1 154 59.7
GSVIVG01002955001 Vitis vinifera HOM05D005165 ORTHO05D006361 7.9e-39 164.1 151 60.9
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 1.0e-38 163.7 154 58.4
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 1.0e-38 163.7 151 60.9
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 1.0e-38 163.7 153 60.8
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 1.0e-38 163.7 156 59.6
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 3.0e-38 162.2 151 60.3
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 5.1e-38 161.4 156 60.3
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 8.7e-38 160.6 153 58.2
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 8.7e-38 160.6 158 57.6
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 8.7e-38 160.6 154 59.1
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 1.1e-37 160.2 158 57.6
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 1.5e-37 159.8 158 57.0
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 2.5e-37 159.1 155 57.4
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.5e-37 159.1 162 55.6
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 2.5e-37 159.1 162 55.6
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 3.3e-37 158.7 151 58.3
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 4.3e-37 158.3 156 55.8
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 4.3e-37 158.3 156 58.3
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 5.7e-37 157.9 157 59.2
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 9.6e-37 157.1 154 58.4
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 9.6e-37 157.1 153 58.2
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 9.6e-37 157.1 153 58.2
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 9.6e-37 157.1 158 56.3
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.3e-36 156.8 151 59.6
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.6e-36 156.4 153 58.2
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 2.8e-36 155.6 154 57.1
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 3.7e-36 155.2 158 56.3
CAN.G569.18 Capsicum annuum HOM05D005165 ORTHO05D006361 6.3e-36 154.5 109 72.5
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 1.1e-35 153.7 158 56.3
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 1.4e-35 153.3 158 55.1
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 1.8e-35 152.9 158 55.1
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 2.4e-35 152.5 154 56.5
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 2.4e-35 152.5 152 54.6
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 2.4e-35 152.5 154 57.8
PGSC0003DMG400016486 Solanum tuberosum HOM05D005165 ORTHO05D006361 2.4e-35 152.5 151 56.3
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 3.1e-35 152.1 146 58.2
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 3.1e-35 152.1 151 56.3
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 4.1e-35 151.8 154 55.8
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 5.3e-35 151.4 152 59.2
Solyc02g080400.3 Solanum lycopersicum HOM05D005165 ORTHO05D006361 5.3e-35 151.4 151 56.3
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 9.0e-35 150.6 154 53.2
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 1.2e-34 150.2 157 56.7
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.2e-34 150.2 154 55.2
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 1.5e-34 149.8 155 52.9
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 1.5e-34 149.8 155 54.8
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 2.0e-34 149.4 156 53.2
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 2.6e-34 149.1 155 55.5
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 5.9e-34 147.9 153 54.2
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 5.9e-34 147.9 153 54.2
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 5.9e-34 147.9 153 54.2
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 5.9e-34 147.9 156 52.6
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 5.9e-34 147.9 153 54.2
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 1.0e-33 147.1 153 54.9
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 1.0e-33 147.1 153 54.9
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 1.0e-33 147.1 152 54.6
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 2.9e-33 145.6 153 51.6
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 2.9e-33 145.6 153 52.3
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 3.8e-33 145.2 149 59.7
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 3.8e-33 145.2 155 54.8
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 3.8e-33 145.2 151 55.0
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 3.8e-33 145.2 153 54.2
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 6.5e-33 144.4 153 52.3
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 8.5e-33 144.1 153 53.6
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 1.1e-32 143.7 156 51.3
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 1.4e-32 143.3 155 53.5
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.9e-32 142.9 153 53.6
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 2.5e-32 142.5 153 52.9
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 2.5e-32 142.5 151 53.0
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 2.5e-32 142.5 160 51.9
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 7.2e-32 141.0 152 53.9
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 7.2e-32 141.0 109 68.8
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 7.2e-32 141.0 156 51.3
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 9.3e-32 140.6 154 50.0
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 2.7e-31 139.0 152 52.0
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 2.7e-31 139.0 109 67.0
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 3.9e-30 135.2 156 50.6
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 5.7e-29 131.3 158 49.4
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 2.2e-28 129.4 105 64.8
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 2.2e-28 129.4 155 50.3
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 2.8e-28 129.0 153 50.3
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 8.2e-28 127.5 153 48.4
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 9.1e-27 124.0 138 50.7
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 9.1e-27 124.0 153 48.4
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 1.5e-26 123.2 156 43.6
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 1.5e-26 123.2 156 44.9
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 3.4e-26 122.1 155 43.9
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 1.8e-19 99.8 154 37.7
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 1.2e-18 97.1 102 46.1
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 5.0e-17 91.7 84 53.6
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 6.7e-14 81.3 123 39.0
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 6.3e-12 74.7 142 37.3
AL7G32100 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 1.1e-11 73.9 99 42.4
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 1.4e-11 73.6 75 50.7
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 2.4e-11 72.8 107 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 4.1e-11 72.0 140 33.6
HPP92_012318 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.2e-10 70.5 109 37.6
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 1.6e-10 70.1 153 32.0


User provided reference genes

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