Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.4e-77 291.6 145 100.0
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.1e-59 233.4 149 79.2
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 5.4e-59 231.1 147 79.6
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 7.1e-59 230.7 148 79.7
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 3.5e-58 228.4 148 79.1
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.5e-58 228.4 148 79.1
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.6e-58 228.0 148 78.4
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.5e-56 223.0 150 76.0
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.3e-56 221.9 148 76.4
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.2e-55 219.9 150 78.0
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.6e-55 218.4 150 78.0
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 8.1e-55 217.2 149 76.5
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 8.1e-55 217.2 136 80.9
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.4e-54 216.5 147 78.2
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.2e-53 213.4 149 73.2
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-53 213.4 136 79.4
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.2e-53 213.4 148 74.3
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.2e-53 213.4 148 74.3
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 2.6e-53 212.2 147 74.8
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 2.6e-53 212.2 139 79.1
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 5.8e-53 211.1 145 75.9
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 7.6e-53 210.7 146 76.0
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 9.9e-53 210.3 138 77.5
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 9.9e-53 210.3 136 79.4
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.7e-52 209.5 136 77.9
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.7e-52 209.5 137 78.1
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 2.2e-52 209.1 154 71.4
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 2.2e-52 209.1 154 71.4
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 3.8e-52 208.4 135 77.8
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 3.8e-52 208.4 136 78.7
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 6.4e-52 207.6 134 75.4
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 6.4e-52 207.6 135 79.3
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 8.4e-52 207.2 138 76.1
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 8.4e-52 207.2 138 76.1
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 8.4e-52 207.2 135 75.6
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-51 206.8 137 76.6
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.1e-51 206.8 137 76.6
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.1e-51 206.8 137 78.1
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.4e-51 206.5 135 76.3
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.4e-51 206.5 138 76.1
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-51 206.5 138 76.1
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-51 206.5 138 76.1
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.4e-51 206.5 138 76.1
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.4e-51 206.5 136 76.5
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 2.4e-51 205.7 138 76.1
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 2.4e-51 205.7 138 76.1
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 2.4e-51 205.7 136 78.7
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.2e-51 205.3 139 75.5
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 3.2e-51 205.3 138 76.1
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.2e-51 205.3 139 75.5
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.2e-51 205.3 139 75.5
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 3.2e-51 205.3 138 76.1
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 4.1e-51 204.9 136 77.9
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 4.1e-51 204.9 137 78.1
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.1e-51 204.9 137 78.1
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 5.4e-51 204.5 138 75.4
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 5.4e-51 204.5 135 77.0
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 5.4e-51 204.5 134 76.9
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 5.4e-51 204.5 135 76.3
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 5.4e-51 204.5 135 76.3
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 7.1e-51 204.1 132 78.0
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 7.1e-51 204.1 136 77.9
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 9.2e-51 203.8 135 77.0
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 9.2e-51 203.8 135 76.3
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-50 203.4 135 76.3
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.2e-50 203.4 169 66.3
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.7e-50 202.2 136 77.2
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 4.6e-50 201.4 135 76.3
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 4.6e-50 201.4 136 77.2
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 6.0e-50 201.1 137 76.6
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 6.0e-50 201.1 140 73.6
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 7.8e-50 200.7 138 75.4
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 7.8e-50 200.7 136 75.7
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 7.8e-50 200.7 136 77.2
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.0e-49 200.3 134 76.1
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.0e-49 200.3 135 74.8
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.3e-49 199.9 112 89.3
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 2.3e-49 199.1 135 74.8
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 2.3e-49 199.1 135 75.6
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 3.0e-49 198.7 141 74.5
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 3.9e-49 198.4 110 90.0
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 5.1e-49 198.0 136 74.3
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 6.6e-49 197.6 136 74.3
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 6.6e-49 197.6 133 77.4
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 6.6e-49 197.6 131 77.1
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 8.7e-49 197.2 101 94.1
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 8.7e-49 197.2 133 77.4
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 8.7e-49 197.2 144 71.5
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.1e-48 196.8 142 76.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.1e-48 196.8 136 74.3
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.1e-48 196.8 133 77.4
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.9e-48 196.1 155 69.7
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 2.5e-48 195.7 135 75.6
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 2.5e-48 195.7 136 71.3
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 3.3e-48 195.3 98 95.9
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.3e-48 195.3 138 74.6
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 9.6e-48 193.7 141 71.6
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.6e-47 193.0 139 71.9
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 3.6e-47 191.8 146 69.2
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.7e-47 191.4 136 71.3
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 4.7e-47 191.4 144 69.4
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.1e-46 190.3 141 73.8
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.1e-46 188.7 141 73.0
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.9e-46 187.6 137 72.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 3.4e-45 185.3 136 69.1
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.4e-45 185.3 144 70.8
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.4e-45 185.3 136 71.3
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 3.4e-45 185.3 110 83.6
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 4.4e-45 184.9 136 72.1
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.4e-45 184.9 136 71.3
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.7e-44 183.0 144 66.7
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 6.4e-44 181.0 151 64.2
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 5.1e-41 171.4 136 66.2
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.5e-40 169.1 99 82.8
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 3.5e-34 148.7 136 61.0
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 7.9e-34 147.5 97 72.2
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.5e-32 143.3 142 50.7
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 9.6e-32 140.6 144 52.1
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 6.2e-31 137.9 94 71.3
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.8e-30 136.3 109 58.7
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 5.8e-29 131.3 94 66.0
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 6.4e-28 127.9 138 55.8
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 3.9e-25 118.6 72 80.6
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 2.5e-24 115.9 115 53.9
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 7.1e-19 97.8 52 88.5
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.6e-18 95.1 50 90.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.6e-18 95.1 50 90.0
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.8e-17 93.2 90 51.1
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.5e-16 90.1 120 44.2
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 4.2e-11 72.0 116 32.8


User provided reference genes

Program Settings