Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 0.0e+00 1353.6 687 100.0
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 1.4e-173 614.0 741 50.3
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.3e-166 590.9 707 50.9
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.8e-160 570.5 706 51.3
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 3.5e-132 476.5 745 41.6
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 1.2e-129 468.0 740 43.2
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 1.6e-124 451.1 747 41.1
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 3.5e-108 396.7 732 39.9
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.7e-107 394.4 747 39.8
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 4.8e-105 386.3 749 39.7
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 1.4e-104 384.8 769 38.9
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.1e-101 375.2 797 38.1
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 4.2e-101 373.2 704 40.8
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.3e-99 368.2 753 39.3
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.3e-99 367.5 747 38.8
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 8.7e-99 365.5 740 38.8
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 3.1e-96 357.1 751 36.1
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 3.4e-95 353.6 751 35.4
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 1.4e-93 348.2 748 35.7
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 3.5e-92 343.6 753 36.7
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 6.7e-91 339.3 709 36.4
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.5e-90 338.2 752 34.7
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 2.8e-89 334.0 769 35.4
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 4.1e-88 330.1 755 36.8
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 6.9e-88 329.3 744 38.0
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 1.5e-87 328.2 776 36.1
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 2.2e-86 324.3 725 38.1
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 2.5e-85 320.9 751 35.2
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 4.6e-84 316.6 750 36.7
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 1.0e-83 315.5 706 35.0
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 1.5e-82 311.6 765 35.2
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.5e-82 311.6 766 34.7
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 3.3e-82 310.5 727 35.9
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 3.3e-82 310.5 637 38.0
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 1.6e-81 308.1 757 35.4
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 8.2e-81 305.8 768 34.6
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 8.2e-81 305.8 747 34.8
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 2.4e-80 304.3 754 34.9
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 4.1e-80 303.5 752 35.0
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.3e-78 298.5 879 31.1
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 2.2e-78 297.7 755 34.6
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 7.2e-77 292.7 761 34.2
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 3.6e-76 290.4 758 35.5
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 6.1e-76 289.7 755 35.1
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 1.4e-75 288.5 782 33.2
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.3e-75 287.7 770 34.9
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 3.0e-75 287.3 827 34.9
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 5.1e-75 286.6 763 34.1
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 3.3e-74 283.9 754 34.2
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 5.7e-74 283.1 757 33.7
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 5.7e-74 283.1 730 34.7
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 7.4e-74 282.7 765 33.5
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 3.1e-72 277.3 708 35.0
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 3.1e-72 277.3 752 35.9
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 3.1e-72 277.3 736 34.2
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 4.1e-72 276.9 751 34.6
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 4.1e-72 276.9 782 32.7
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 2.0e-71 274.6 777 33.1
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 3.4e-71 273.9 782 32.0
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 1.0e-70 272.3 753 33.5
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.3e-70 271.9 762 33.5
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 8.5e-70 269.2 745 33.2
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 3.6e-68 263.8 750 33.2
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.8e-67 261.5 749 33.9
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 2.3e-67 261.2 709 31.5
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 1.7e-65 255.0 756 31.2
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 3.7e-65 253.8 709 34.1
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.7e-65 253.8 911 30.1
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 7.0e-64 249.6 759 32.4
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 9.1e-64 249.2 733 32.7
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 2.2e-62 244.6 741 32.1
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 5.0e-62 243.4 538 37.5
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 1.9e-61 241.5 691 34.0
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.4e-59 235.3 708 32.6
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 2.3e-59 234.6 780 31.8
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 4.0e-59 233.8 706 33.1
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.1e-58 232.3 769 31.5
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 4.4e-58 230.3 743 33.4
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.3e-57 228.8 768 32.4
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 6.3e-57 226.5 727 32.2
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 2.4e-56 224.6 674 32.6
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 4.1e-56 223.8 764 30.5
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 4.1e-56 223.8 746 31.0
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 4.1e-56 223.8 729 32.5
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 9.1e-56 222.6 748 31.4
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.6e-55 221.9 727 31.5
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 5.9e-55 219.9 744 32.9
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 7.7e-55 219.5 718 32.7
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 7.7e-55 219.5 766 32.2
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.3e-54 218.8 706 31.9
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 6.5e-54 216.5 764 30.9
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 2.5e-53 214.5 749 31.0
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 2.1e-52 211.5 758 32.1
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 2.7e-52 211.1 705 29.6
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 6.1e-52 209.9 692 30.5
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 3.0e-51 207.6 667 29.4
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 7.0e-48 196.4 742 30.7
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 3.5e-47 194.1 665 30.2
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 3.8e-46 190.7 173 56.1
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 1.5e-45 188.7 300 43.7
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 4.2e-45 187.2 773 30.4
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 2.7e-44 184.5 677 30.0
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 1.4e-43 182.2 624 29.6
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 1.4e-43 182.2 781 30.1
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.4e-43 182.2 682 28.4
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.3e-43 181.4 664 28.3
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 4.0e-43 180.6 763 28.3
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 7.5e-42 176.4 708 26.6
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 9.8e-42 176.0 652 29.3
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 1.1e-37 162.5 747 27.7
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 9.5e-37 159.5 757 29.6
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 9.5e-37 159.5 696 27.6
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 5.2e-35 153.7 774 30.4
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 1.3e-33 149.1 768 29.6
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 2.9e-33 147.9 766 28.7
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 6.4e-33 146.7 754 29.0
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 6.4e-33 146.7 750 29.5
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 7.0e-32 143.3 750 29.2
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 1.6e-31 142.1 743 29.2
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 7.8e-31 139.8 774 28.7
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 7.8e-31 139.8 774 28.7
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 1.3e-30 139.0 750 29.6
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 3.9e-30 137.5 122 56.6
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 3.9e-30 137.5 687 27.1
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 9.5e-29 132.9 776 27.7
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 9.5e-29 132.9 776 27.7
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 7.5e-26 123.2 764 27.9
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 3.3e-21 107.8 774 26.9
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 2.1e-20 105.1 96 59.4
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 3.6e-20 104.4 751 24.8
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 4.9e-17 94.0 828 24.2
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 1.4e-16 92.4 794 23.7
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 2.7e-15 88.2 204 32.8
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 1.3e-14 85.9 194 35.6
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 5.4e-08 63.9 134 38.1
Zm00001eb243360 Zea mays HOM05D019841 ORTHO05D037008 3.9e-06 57.8 134 36.6


User provided reference genes

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