Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 4.9e-263 910.6 460 100.0
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-69 267.3 490 37.6
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.8e-61 240.4 395 40.3
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.0e-60 235.7 390 38.5
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.9e-57 227.6 376 39.1
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 1.9e-57 227.6 227 52.9
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 3.2e-57 226.9 226 51.8
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.1e-56 224.2 410 37.8
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.7e-56 223.8 441 33.1
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 6.7e-55 219.2 432 34.3
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.4e-54 216.5 414 36.2
SGA_v2.0_scaffold106G30572 Striga asiatica HOM05D000403 ORTHO05D009136 2.2e-53 214.2 201 55.7
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.8e-53 213.8 388 34.8
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.7e-51 205.7 396 35.4
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.2e-45 187.6 405 33.6
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.4e-44 184.1 218 45.4
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-43 181.8 397 34.3
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 3.5e-43 180.3 398 33.7
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.5e-42 176.0 382 33.2
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-42 176.0 405 32.6
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-42 176.0 405 32.6
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 8.0e-40 169.1 402 32.1
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 8.9e-39 165.6 397 32.2
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 7.5e-38 162.5 430 29.8
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-37 161.8 384 33.1
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 4.9e-37 159.8 396 30.6
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-36 158.7 391 32.7
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.8e-36 157.9 426 28.4
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 1.8e-36 157.9 190 45.3
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 1.8e-36 157.9 389 31.9
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 5.4e-36 156.4 392 32.7
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 3.5e-35 153.7 391 30.4
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 4.5e-35 153.3 411 29.9
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-34 151.8 407 32.2
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 2.9e-34 150.6 403 28.8
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-34 150.2 400 30.5
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.1e-33 148.7 430 30.7
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-33 147.1 421 29.9
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 4.3e-33 146.7 436 29.8
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-32 144.8 381 31.8
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-32 144.4 421 30.2
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 4.7e-32 143.3 385 31.2
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-32 142.9 375 32.8
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-30 137.5 399 29.8
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-30 137.5 402 31.3
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 5.8e-30 136.3 391 30.9
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-29 135.2 408 29.2
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-29 134.8 391 31.2
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 6.4e-29 132.9 411 30.2
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.2e-28 130.6 394 28.9
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 7.0e-28 129.4 386 29.0
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-27 126.7 415 27.5
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 7.3e-25 119.4 264 32.6
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 7.3e-25 119.4 426 27.9
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-22 112.1 219 37.0
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 5.8e-22 109.8 235 33.6
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 5.8e-22 109.8 379 29.0
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-21 108.2 386 26.9
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-21 108.2 252 32.9
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-21 108.2 254 31.9
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 2.2e-21 107.8 384 27.6
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 6.4e-21 106.3 438 25.8
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 8.3e-21 105.9 339 29.5
SalBow3G2007 Salvia bowleyana HOM05D000151 ORTHO05D000074 7.0e-20 102.8 311 28.9
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 7.0e-20 102.8 384 26.8
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.2e-20 102.4 400 26.5
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 1.2e-19 102.1 263 31.6
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-19 102.1 470 25.5
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.6e-19 100.1 232 33.6
Migut.K00647 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.8e-19 99.4 401 27.7
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 7.8e-19 99.4 153 38.6
Dinv22142 Davidia involucrata HOM05D007685 ORTHO05D009136 1.3e-18 98.6 219 32.4
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-18 98.6 113 41.6
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 3.0e-18 97.4 381 24.1
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 5.0e-18 96.7 321 29.3
CAN.G760.4 Capsicum annuum HOM05D007685 ORTHO05D009136 1.1e-17 95.5 202 31.7
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-16 92.0 176 34.7
Migut.K00435 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.6e-16 90.5 111 45.0
Dinv22135 Davidia involucrata HOM05D007685 ORTHO05D009136 6.2e-16 89.7 388 25.3
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 6.2e-16 89.7 380 25.3
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 8.1e-16 89.4 372 25.8
Migut.H00781 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-15 88.6 345 27.5
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 1.8e-15 88.2 319 28.8
SalBow5G4249 Salvia bowleyana HOM05D007685 ORTHO05D009136 4.0e-15 87.0 306 25.8
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 8.9e-15 85.9 134 36.6
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-14 85.5 117 41.9
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 2.6e-14 84.3 375 25.3
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.4e-14 84.0 366 25.4
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 3.4e-14 84.0 110 40.0
DCAR_012644 Daucus carota HOM05D000151 ORTHO05D000074 7.5e-14 82.8 335 26.0
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 9.9e-14 82.4 400 24.0
Lj3g0006900 Lotus japonicus HOM05D000151 ORTHO05D000074 9.9e-14 82.4 356 26.4
SGA_v2.0_scaffold79G25502 Striga asiatica HOM05D007685 ORTHO05D009136 9.9e-14 82.4 189 37.6
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.3e-13 82.0 296 24.0
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 1.3e-13 82.0 382 22.5
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 1.3e-13 82.0 234 29.9
Oeu049041.1 Olea europaea HOM05D000151 ORTHO05D000074 2.2e-13 81.3 236 28.8
CAN.G206.109 Capsicum annuum HOM05D000635 ORTHO05D000488 2.9e-13 80.9 330 24.5
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 2.9e-13 80.9 235 27.7
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.9e-13 80.1 347 23.6
COL.COLO4_36113 Corchorus olitorius HOM05D000151 ORTHO05D000074 8.3e-13 79.3 288 24.0
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-12 79.0 358 24.6
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.1e-12 79.0 218 28.4
COL.COLO4_23779 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.9e-12 78.2 382 24.3
Actinidia09337 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.2e-12 77.4 317 24.6
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.2e-12 77.4 307 23.5
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.2e-12 77.4 210 28.1
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 3.2e-12 77.4 217 27.6
Oeu016486.1 Olea europaea HOM05D000151 ORTHO05D000074 3.2e-12 77.4 238 25.6
Rhsim07G0073900 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.2e-12 77.4 267 28.1
TWI63G1408 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.2e-12 77.4 323 26.0
Aqoxy6G02649 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.4e-12 76.6 226 27.4
Cfa016448 Carpinus fangiana HOM05D015779 ORTHO05D000074 5.4e-12 76.6 226 25.7
Haze_23002 Corylus avellana HOM05D000151 ORTHO05D000074 5.4e-12 76.6 273 24.9
SGA_v2.0_scaffold10G05459 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-11 75.1 174 33.3
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-11 75.1 106 43.4
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-11 74.3 328 25.9
SGA_v2.0_scaffold110G31308 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-11 74.3 81 45.7
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 3.5e-11 73.9 219 28.8
RcHm_v2.0_Chr1g0339581 Rosa chinensis HOM05D000151 ORTHO05D000074 6.0e-11 73.2 363 22.9
Rhsim07G0073800 Rhododendron simsii HOM05D002241 ORTHO05D002458 7.8e-11 72.8 249 26.1
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-10 72.4 379 23.0
Lj3g0002558 Lotus japonicus HOM05D000151 ORTHO05D000074 1.3e-10 72.0 314 26.1
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 1.3e-10 72.0 314 24.2
CANSAT78G1270 Cannabis sativa HOM05D000151 ORTHO05D000074 1.7e-10 71.6 334 24.3
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.3e-10 71.2 311 26.0
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.3e-10 71.2 312 26.3
SGA_v2.0_scaffold9G05056 Striga asiatica HOM05D007685 ORTHO05D009136 2.3e-10 71.2 158 33.5
Dinv14673 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-10 70.9 195 28.7
Rhsim09G0042100 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.9e-10 70.5 338 27.8
Dinv28194 Davidia involucrata HOM05D002577 ORTHO05D009136 6.6e-10 69.7 327 26.3
TWI23G0161 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.6e-10 69.3 303 22.4
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-09 68.9 300 21.0
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-09 68.9 367 21.8
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-09 68.6 90 43.3
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.5e-09 68.6 311 23.5
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 1.9e-09 68.2 85 43.5
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.9e-09 68.2 379 22.2
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.5e-09 67.8 341 23.8
CsaV3_3G005870 Cucumis sativus L. HOM05D000151 ORTHO05D034718 4.3e-09 67.0 336 24.7
AT5G53790 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 5.6e-09 66.6 285 22.8
CAN.G861.25 Capsicum annuum HOM05D013589 ORTHO05D009136 5.6e-09 66.6 339 25.7
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 5.6e-09 66.6 402 23.6
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 5.6e-09 66.6 337 25.8
Migut.K00387 Erythranthe guttata HOM05D000041 ORTHO05D010141 7.3e-09 66.2 54 51.9
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.3e-09 66.2 301 23.6
vmacro00509 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 9.5e-09 65.9 307 25.4
CAN.G395.31 Capsicum annuum HOM05D013589 ORTHO05D009136 1.2e-08 65.5 264 25.0
CAN.G423.42 Capsicum annuum HOM05D013589 ORTHO05D009136 1.2e-08 65.5 233 26.2
AL8G28810 Arabidopsis lyrata HOM05D000930 ORTHO05D000748 1.6e-08 65.1 319 21.6
Haze_25246 Corylus avellana HOM05D000151 ORTHO05D000074 1.6e-08 65.1 260 26.2
SGA_v2.0_scaffold51G18692 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-08 64.7 171 31.6
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-08 64.3 216 26.9
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 3.6e-08 63.9 393 20.9
Thhalv10013918m.g Eutrema salsugineum HOM05D000930 ORTHO05D000748 3.6e-08 63.9 315 25.1
QL07p011340 Quercus lobata HOM05D000151 ORTHO05D000074 3.6e-08 63.9 298 25.2
COL.COLO4_13786 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.7e-08 63.5 313 24.0
Thecc.06G008300 Theobroma cacao HOM05D000151 ORTHO05D000074 4.7e-08 63.5 275 23.6
MBI06_g17230_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.4e-07 62.0 234 23.9
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-07 62.0 360 22.2
Aqoxy2G00530 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.1e-07 60.8 302 22.5
Eucgr.H00114 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.1e-07 60.8 335 22.7
Migut.B00574 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.0e-07 60.5 74 40.5
COL.COLO4_29228 Corchorus olitorius HOM05D000151 ORTHO05D000074 5.2e-07 60.1 311 23.8
CAN.G1166.23 Capsicum annuum HOM05D000151 ORTHO05D000074 6.8e-07 59.7 105 34.3
DCAR_013283 Daucus carota HOM05D000151 ORTHO05D000074 1.2e-06 58.9 208 27.9
SGA_v2.0_scaffold205G41697 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-06 58.9 96 34.4
Duzib093G1401 Durio zibethinus HOM05D000151 ORTHO05D000074 1.5e-06 58.5 338 22.8
TWI23G1227 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.5e-06 58.5 317 23.0
BraA02t06150Z Brassica rapa HOM05D000930 ORTHO05D000748 2.0e-06 58.2 314 21.0
vmacro01454 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 2.0e-06 58.2 106 34.0
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-06 57.4 91 34.1
Aqoxy5G02163 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.4e-06 57.0 152 28.3
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.4e-06 57.0 323 22.6
CAN.G587.82 Capsicum annuum HOM05D013589 ORTHO05D009136 9.9e-06 55.8 93 28.0
Sopen08g030590 Solanum pennellii HOM05D000151 ORTHO05D000074 9.9e-06 55.8 104 32.7
TWI56G0047 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.9e-06 55.8 85 34.1
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.9e-06 55.8 150 28.7


User provided reference genes

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