Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 3.5e-106 388.3 191 100.0
SGA_v2.0_scaffold7G03659 Striga asiatica HOM05D008403 ORTHO05D010317 6.3e-39 164.9 142 56.3
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 9.1e-22 107.8 160 38.8
Migut.F01664 Erythranthe guttata HOM05D008403 ORTHO05D010317 5.0e-20 102.1 145 37.9
Migut.M01476 Erythranthe guttata HOM05D008403 ORTHO05D010317 4.7e-18 95.5 147 36.1
SGA_v2.0_scaffold186G40151 Striga asiatica HOM05D008403 ORTHO05D010317 6.1e-18 95.1 159 36.5
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 2.0e-16 90.1 152 37.5
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 2.0e-16 90.1 119 42.9
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 2.8e-15 86.3 145 36.6
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 3.7e-15 85.9 157 34.4
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 3.1e-14 82.8 144 34.0
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 4.1e-14 82.4 134 35.1
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 7.0e-14 81.6 122 40.2
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 7.0e-14 81.6 144 34.0
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 1.2e-13 80.9 162 33.3
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 1.6e-13 80.5 140 36.4
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 1.6e-13 80.5 144 33.3
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 2.0e-13 80.1 131 33.6
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 5.9e-13 78.6 142 35.2
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 1.7e-12 77.0 153 31.4
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 1.7e-12 77.0 140 31.4
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 2.9e-12 76.3 129 34.9
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 2.9e-12 76.3 165 28.5
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 3.8e-12 75.9 129 35.7
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 5.0e-12 75.5 140 35.7
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 6.5e-12 75.1 138 32.6
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 8.5e-12 74.7 162 31.5
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 1.5e-11 73.9 142 29.6
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 1.5e-11 73.9 130 33.8
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.5e-11 73.9 156 28.8
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 2.5e-11 73.2 135 35.6
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 2.5e-11 73.2 130 32.3
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 2.7e-10 69.7 157 30.6
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 2.7e-10 69.7 140 33.6
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 3.6e-10 69.3 139 32.4
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 3.6e-10 69.3 144 33.3
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 6.1e-10 68.6 124 33.9
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 6.1e-10 68.6 101 36.6
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 1.0e-09 67.8 142 34.5
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 1.4e-09 67.4 154 27.9
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 1.4e-09 67.4 125 35.2
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 4.0e-09 65.9 141 31.2
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 4.0e-09 65.9 150 29.3
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 5.2e-09 65.5 120 34.2
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 1.2e-08 64.3 125 30.4
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 1.2e-08 64.3 135 28.1
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.5e-08 63.9 145 29.0
Lj6g0013229 Lotus japonicus HOM05D001578 ORTHO05D001207 2.0e-08 63.5 140 32.9
PSO732G0418 Papaver somniferum HOM05D008403 ORTHO05D010317 3.4e-08 62.8 126 34.1
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 5.7e-08 62.0 147 28.6
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 5.7e-08 62.0 157 29.3
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 2.2e-07 60.1 141 28.4
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 2.2e-07 60.1 124 33.1
SGA_v2.0_scaffold47G17718 Striga asiatica HOM05D008403 ORTHO05D010317 2.2e-07 60.1 125 32.8
Ciclev10002604m.g Citrus clementina HOM05D004113 ORTHO05D005233 2.8e-07 59.7 129 30.2
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.8e-07 59.7 140 27.9
Prupe.6G197400 Prunus persica HOM05D004113 ORTHO05D005233 6.3e-07 58.5 126 30.2
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 8.3e-07 58.2 121 33.9
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 1.1e-06 57.8 120 30.8
AL8G42030 Arabidopsis lyrata HOM05D004113 ORTHO05D005233 1.1e-06 57.8 125 28.8
Lj1g0003494 Lotus japonicus HOM05D004113 ORTHO05D005233 1.4e-06 57.4 124 30.6
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 1.4e-06 57.4 138 28.3
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.8e-06 57.0 130 30.0
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 2.4e-06 56.6 161 25.5
Sp6g02140 Schrenkiella parvula HOM05D003556 ORTHO05D003404 2.4e-06 56.6 163 25.8
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 3.1e-06 56.2 134 29.9
PSO675G2139 Papaver somniferum HOM05D028959 ORTHO05D030431 4.1e-06 55.8 138 27.5
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 5.4e-06 55.5 132 31.1
CANSAT25G1336 Cannabis sativa HOM05D003556 ORTHO05D003404 7.0e-06 55.1 114 29.8
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 7.0e-06 55.1 152 23.7
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 7.0e-06 55.1 164 29.3
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 7.0e-06 55.1 144 27.8
CsaV3_6G041710 Cucumis sativus L. HOM05D004113 ORTHO05D005233 9.1e-06 54.7 149 29.5
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 9.1e-06 54.7 162 28.4


User provided reference genes

Program Settings