Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40151 Striga asiatica HOM05D008403 ORTHO05D010317 2.6e-127 458.8 233 100.0
Migut.F01664 Erythranthe guttata HOM05D008403 ORTHO05D010317 2.6e-31 139.8 181 42.5
Migut.M01476 Erythranthe guttata HOM05D008403 ORTHO05D010317 9.4e-29 131.3 175 42.3
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 1.8e-27 127.1 154 40.3
SGA_v2.0_scaffold7G03659 Striga asiatica HOM05D008403 ORTHO05D010317 1.5e-26 124.0 183 42.6
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 1.1e-21 107.8 167 37.1
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 2.7e-20 103.2 151 35.1
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 8.0e-20 101.7 170 32.9
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 3.9e-19 99.4 139 38.1
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 2.6e-18 96.7 159 36.5
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 4.4e-18 95.9 165 32.7
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 7.4e-18 95.1 161 34.2
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 7.4e-18 95.1 173 33.5
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 9.7e-18 94.7 156 35.3
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 2.8e-17 93.2 175 34.3
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 3.7e-17 92.8 152 35.5
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 8.2e-17 91.7 165 33.9
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 3.1e-16 89.7 170 30.0
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 1.2e-15 87.8 168 33.9
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 2.0e-15 87.0 170 35.3
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 3.5e-15 86.3 101 42.6
Potri.016G001600 Populus trichocarpa HOM05D008403 ORTHO05D010317 4.5e-15 85.9 172 32.0
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 7.7e-15 85.1 153 33.3
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 1.0e-14 84.7 152 34.2
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 1.3e-14 84.3 167 31.1
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 2.9e-14 83.2 165 32.7
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 5.0e-14 82.4 164 35.4
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 1.1e-13 81.3 154 32.5
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 1.1e-13 81.3 178 29.8
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 2.1e-12 77.0 150 29.3
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 2.7e-12 76.6 155 29.0
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 2.7e-12 76.6 124 35.5
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 4.7e-12 75.9 142 31.0
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 1.4e-11 74.3 140 31.4
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 5.2e-11 72.4 142 30.3
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 6.7e-11 72.0 170 27.6
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 1.2e-10 71.2 138 30.4
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 1.5e-10 70.9 182 28.6
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 1.5e-10 70.9 171 29.2
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 5.7e-10 68.9 149 28.9
ClCG10G011070 Citrullus lanatus HOM05D003556 ORTHO05D003404 9.7e-10 68.2 174 30.5
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 9.7e-10 68.2 167 31.7
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 1.7e-09 67.4 147 27.2
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 1.7e-09 67.4 146 30.1
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 1.7e-09 67.4 178 27.5
MELO3C017944.2 Cucumis melo HOM05D003556 ORTHO05D003404 2.2e-09 67.0 139 30.2
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 2.2e-09 67.0 173 26.6
CsaV3_4G000950 Cucumis sativus L. HOM05D003556 ORTHO05D003404 2.8e-09 66.6 173 30.6
Lj6g0019770 Lotus japonicus HOM05D000001 ORTHO05D010775 2.8e-09 66.6 87 41.4
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 3.7e-09 66.2 173 26.0
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 4.8e-09 65.9 188 31.4
Psat0s740g0040 Pisum sativum HOM05D001578 ORTHO05D001207 4.8e-09 65.9 173 26.6
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 8.2e-09 65.1 167 26.3
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 1.1e-08 64.7 160 31.2
Medtr4g122740 Medicago truncatula HOM05D001578 ORTHO05D001207 1.8e-08 63.9 172 26.7
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 1.8e-08 63.9 160 30.0
TPR.G33864 Trifolium pratense HOM05D001578 ORTHO05D001207 1.8e-08 63.9 157 25.5
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 3.1e-08 63.2 151 27.2
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 3.1e-08 63.2 170 24.7
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 3.1e-08 63.2 144 26.4
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 4.1e-08 62.8 161 31.7
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 9.1e-08 61.6 161 30.4
TPR.G25390 Trifolium pratense HOM05D001578 ORTHO05D001207 1.2e-07 61.2 173 27.2
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 2.0e-07 60.5 150 28.7
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 2.0e-07 60.5 170 28.2
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 2.0e-07 60.5 165 28.5
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 2.0e-07 60.5 172 26.7
Eucgr.H04068 Eucalyptus grandis HOM05D001578 ORTHO05D001207 2.7e-07 60.1 143 30.1
Eucgr.L02840 Eucalyptus grandis HOM05D001578 ORTHO05D001207 2.7e-07 60.1 143 30.1
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 2.7e-07 60.1 170 24.1
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 3.5e-07 59.7 173 25.4
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 3.5e-07 59.7 173 26.0
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 5.9e-07 58.9 147 26.5
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 7.7e-07 58.5 152 28.3
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 7.7e-07 58.5 184 23.9
AL1G54460 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 1.3e-06 57.8 152 27.6
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 1.3e-06 57.8 171 24.6
Medtr4g122890 Medicago truncatula HOM05D001578 ORTHO05D001207 1.7e-06 57.4 142 29.6
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 2.2e-06 57.0 139 30.9
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 2.9e-06 56.6 165 29.1
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 3.8e-06 56.2 141 24.8
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 3.8e-06 56.2 173 23.7
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 6.5e-06 55.5 93 30.1
TAR627G0317 Trochodendron aralioides HOM05D008403 ORTHO05D010317 6.5e-06 55.5 172 23.8
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 8.5e-06 55.1 160 28.1
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 8.5e-06 55.1 168 26.2


User provided reference genes

Program Settings