Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 1.6e-100 369.4 180 100.0
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 3.7e-65 251.9 175 72.0
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 2.6e-47 192.6 169 58.6
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 8.0e-44 181.0 171 55.6
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 9.7e-42 174.1 140 60.0
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 3.7e-41 172.2 158 54.4
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 1.1e-40 170.6 187 51.3
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 4.1e-40 168.7 162 54.3
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 1.3e-38 163.7 179 50.8
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 1.1e-37 160.6 168 50.6
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 1.6e-36 156.8 144 54.2
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 8.8e-35 151.0 193 43.0
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 4.4e-34 148.7 173 50.9
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 5.7e-34 148.3 163 49.7
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 9.8e-34 147.5 137 54.7
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 1.3e-33 147.1 137 54.0
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 1.1e-32 144.1 165 46.7
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 1.4e-32 143.7 172 47.1
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 1.8e-32 143.3 164 50.6
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 5.4e-32 141.7 139 51.1
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 1.6e-31 140.2 136 54.4
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 2.0e-31 139.8 171 45.0
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 2.7e-31 139.4 151 49.7
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 7.7e-31 137.9 153 48.4
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 7.7e-31 137.9 153 48.4
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 1.3e-30 137.1 166 44.6
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 2.3e-30 136.3 136 53.7
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 3.8e-30 135.6 160 43.8
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 3.8e-30 135.6 193 39.9
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 5.0e-30 135.2 151 47.0
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 1.1e-29 134.0 161 47.8
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 1.5e-29 133.7 174 43.1
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 1.5e-29 133.7 140 48.6
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 1.9e-29 133.3 168 45.8
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 9.5e-29 131.0 141 49.6
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 9.5e-29 131.0 169 44.4
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 1.6e-28 130.2 167 42.5
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 2.1e-28 129.8 148 47.3
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 2.8e-28 129.4 158 44.9
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 3.6e-28 129.0 135 48.9
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 3.6e-28 129.0 178 44.4
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 3.6e-28 129.0 171 43.9
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 1.8e-27 126.7 161 44.1
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 3.0e-27 125.9 141 48.2
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 4.0e-27 125.6 133 48.9
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 5.2e-27 125.2 166 42.2
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 8.8e-27 124.4 138 50.0
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 1.2e-26 124.0 185 42.7
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.5e-26 123.6 161 41.0
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 2.6e-26 122.9 137 46.7
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 2.6e-26 122.9 162 44.4
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.6e-26 122.9 138 44.9
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 2.6e-26 122.9 127 51.2
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 3.4e-26 122.5 128 48.4
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 7.5e-26 121.3 178 40.4
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 9.8e-26 120.9 182 40.1
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 1.3e-25 120.6 140 49.3
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 1.7e-25 120.2 144 41.7
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 1.7e-25 120.2 134 44.8
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 2.2e-25 119.8 166 41.6
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 2.2e-25 119.8 152 44.7
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 2.8e-25 119.4 136 46.3
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 2.8e-25 119.4 171 43.9
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.8e-25 119.4 133 46.6
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 2.8e-25 119.4 181 39.8
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 3.7e-25 119.0 133 48.1
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 3.7e-25 119.0 133 45.9
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 3.7e-25 119.0 133 45.9
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 4.9e-25 118.6 166 41.6
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 4.9e-25 118.6 166 41.6
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 4.9e-25 118.6 163 41.1
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 4.9e-25 118.6 137 46.0
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 6.3e-25 118.2 133 47.4
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 6.3e-25 118.2 151 45.0
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 6.3e-25 118.2 151 45.0
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 8.3e-25 117.9 132 44.7
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 8.3e-25 117.9 133 48.1
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 8.3e-25 117.9 149 43.6
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 8.3e-25 117.9 138 48.6
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 8.3e-25 117.9 137 46.0
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 8.3e-25 117.9 138 46.4
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 8.3e-25 117.9 169 42.6
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 1.1e-24 117.5 133 46.6
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 1.1e-24 117.5 134 46.3
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 1.1e-24 117.5 131 44.3
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.1e-24 117.5 182 38.5
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 1.4e-24 117.1 169 42.0
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 1.8e-24 116.7 133 46.6
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 1.8e-24 116.7 129 45.7
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 1.8e-24 116.7 146 43.8
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 1.8e-24 116.7 179 41.3
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 2.4e-24 116.3 148 42.6
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.4e-24 116.3 153 41.2
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 2.4e-24 116.3 162 43.8
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 3.1e-24 115.9 164 40.9
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 3.1e-24 115.9 146 42.5
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 3.1e-24 115.9 168 41.1
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 3.1e-24 115.9 132 45.5
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 3.1e-24 115.9 133 46.6
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 4.1e-24 115.5 129 44.2
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 5.4e-24 115.2 167 40.1
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 5.4e-24 115.2 133 45.9
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 5.4e-24 115.2 134 45.5
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 5.4e-24 115.2 133 45.9
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 5.4e-24 115.2 134 45.5
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 5.4e-24 115.2 133 45.9
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 7.0e-24 114.8 141 45.4
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 9.2e-24 114.4 148 44.6
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 9.2e-24 114.4 133 45.9
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 9.2e-24 114.4 131 48.1
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 9.2e-24 114.4 170 40.6
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 9.2e-24 114.4 143 44.8
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 9.2e-24 114.4 166 39.8
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.2e-23 114.0 139 39.6
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.2e-23 114.0 130 43.8
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.6e-23 113.6 137 45.3
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 1.6e-23 113.6 133 43.6
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 1.6e-23 113.6 165 37.0
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 1.6e-23 113.6 161 41.0
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 2.0e-23 113.2 131 46.6
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 2.0e-23 113.2 134 41.0
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 2.0e-23 113.2 134 41.0
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 2.0e-23 113.2 134 41.0
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 2.7e-23 112.8 167 38.9
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 2.7e-23 112.8 166 39.2
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 3.5e-23 112.5 144 43.8
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 3.5e-23 112.5 150 40.7
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 4.5e-23 112.1 140 45.0
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 4.5e-23 112.1 164 40.2
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 4.5e-23 112.1 151 41.7
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 5.9e-23 111.7 167 40.1
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 5.9e-23 111.7 130 45.4
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 5.9e-23 111.7 144 41.7
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 7.8e-23 111.3 143 39.9
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 7.8e-23 111.3 164 40.2
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 7.8e-23 111.3 144 41.0
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 1.0e-22 110.9 159 37.7
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 1.0e-22 110.9 155 42.6
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 1.7e-22 110.2 129 41.9
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 1.7e-22 110.2 166 38.6
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 2.3e-22 109.8 157 41.4
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 2.3e-22 109.8 134 45.5
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 2.9e-22 109.4 131 45.0
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 5.0e-22 108.6 159 39.0
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 5.0e-22 108.6 159 39.0
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 5.0e-22 108.6 159 39.0
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 5.0e-22 108.6 159 39.0
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 5.0e-22 108.6 159 39.0
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 6.6e-22 108.2 163 38.0
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 6.6e-22 108.2 175 39.4
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 8.6e-22 107.8 128 42.2
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 8.6e-22 107.8 173 39.9
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.5e-21 107.1 129 41.9
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 1.5e-21 107.1 159 39.0
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 2.5e-21 106.3 139 44.6
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 2.5e-21 106.3 138 44.2
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 7.3e-21 104.8 90 58.9
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 1.2e-20 104.0 135 43.7
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 2.1e-20 103.2 149 36.9
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 2.1e-20 103.2 136 39.0
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 2.8e-20 102.8 159 37.1
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 4.7e-20 102.1 159 35.8
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 6.1e-20 101.7 135 41.5
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 8.0e-20 101.3 171 36.3
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 8.0e-20 101.3 171 36.3
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 8.0e-20 101.3 144 39.6
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.4e-19 100.5 121 42.1
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 2.3e-19 99.8 168 35.1
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 4.0e-19 99.0 168 35.7
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 6.8e-19 98.2 134 39.6
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 1.2e-18 97.4 134 40.3
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 1.2e-15 87.4 99 45.5
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 1.2e-15 87.4 140 38.6
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 1.2e-15 87.4 88 51.1
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 1.6e-15 87.0 144 36.8
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 1.9e-13 80.1 101 40.6
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 8.0e-12 74.7 80 46.2
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 6.8e-11 71.6 87 41.4


User provided reference genes

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