Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold185G40113 Striga asiatica HOM05D008234 ORTHO05D010422 1.8e-240 835.5 420 100.0
MSTRG.25893 Avicennia marina HOM05D008234 ORTHO05D010422 1.4e-147 526.9 428 63.8
Migut.A00244 Erythranthe guttata HOM05D008234 ORTHO05D010422 5.6e-141 505.0 423 61.7
SalBow4G0332 Salvia bowleyana HOM05D008234 ORTHO05D010422 2.4e-128 463.0 387 60.5
Dinv14224 Davidia involucrata HOM05D008234 ORTHO05D010422 1.1e-112 411.0 390 53.1
Actinidia31219 Actinidia chinensis HOM05D008234 ORTHO05D010422 5.1e-110 402.1 394 52.0
Lj7P707T11 Lonicera japonica HOM05D008234 ORTHO05D010422 8.8e-94 348.2 330 52.1
HanXRQChr02g0048071 Helianthus annuus HOM05D008234 ORTHO05D010422 2.6e-93 346.7 382 45.5
Prupe.1G453000 Prunus persica HOM05D008234 ORTHO05D010422 2.6e-93 346.7 388 48.5
Lsat_1_v5_gn_6_11021 Lactuca sativa HOM05D008234 ORTHO05D010422 9.7e-93 344.7 374 46.0
Cc08_g08970 Coffea canephora HOM05D008234 ORTHO05D010422 2.4e-91 340.1 381 47.2
Ca_12814_v3 Cicer arietinum L. HOM05D008234 ORTHO05D010422 3.1e-91 339.7 393 44.8
Hma1.2p1_1255F.1_g270650 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 2.6e-90 336.7 333 48.9
TWI34G1157 Tripterygium wilfordii HOM05D008234 ORTHO05D010422 7.7e-90 335.1 354 48.6
QL12p026340 Quercus lobata HOM05D008234 ORTHO05D010422 8.5e-89 331.6 382 46.1
TAR626G1903 Trochodendron aralioides HOM05D008234 ORTHO05D010422 1.1e-88 331.3 389 45.8
Lj1g0008618 Lotus japonicus HOM05D008234 ORTHO05D010422 1.5e-88 330.9 383 44.4
Ah.16g105160 Amaranthus hybridus HOM05D008234 ORTHO05D010422 4.2e-88 329.3 382 45.3
TPR.G12012 Trifolium pratense HOM05D008234 ORTHO05D010422 5.7e-85 318.9 381 44.4
Sabra06G0190100 Salix brachista HOM05D008234 ORTHO05D010422 1.7e-84 317.4 403 43.4
Aqoxy7G03839 Aquilegia oxysepala HOM05D008234 ORTHO05D010422 1.3e-81 307.8 397 40.6
CiPaw.08G023300 Carya illinoinensis HOM05D008234 ORTHO05D010422 1.3e-81 307.8 406 43.1
RcHm_v2.0_Chr6g0305711 Rosa chinensis HOM05D008234 ORTHO05D010422 7.2e-80 302.0 406 43.1
CDE04G1659 Ceratophyllum demersum HOM05D008234 ORTHO05D010422 5.7e-77 292.4 395 39.7
Hund19548 Selenicereus undatus HOM05D008234 ORTHO05D010422 9.8e-77 291.6 390 41.5
FAN20G2600 Fragaria x ananassa HOM05D008234 ORTHO05D010422 2.2e-76 290.4 338 46.2
Manes.03G062500 Manihot esculenta HOM05D008234 ORTHO05D010422 7.0e-75 285.4 394 41.4
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 9.1e-75 285.0 424 41.0
Medtr1g008360 Medicago truncatula HOM05D008234 ORTHO05D010422 1.6e-74 284.3 393 41.0
AUR62023021 Chenopodium quinoa HOM05D008234 ORTHO05D010422 2.7e-74 283.5 382 41.1
MD08G1118800 Malus domestica HOM05D008234 ORTHO05D010422 3.5e-74 283.1 414 42.3
GSVIVG01035674001 Vitis vinifera HOM05D008234 ORTHO05D010422 5.9e-74 282.3 397 41.8
Psat6g034200 Pisum sativum HOM05D008234 ORTHO05D010422 9.5e-72 275.0 395 39.7
Ciclev10008407m.g Citrus clementina HOM05D008234 ORTHO05D010422 4.7e-71 272.7 390 40.8
CSS0041765 Camellia sinensis var. sinensis HOM05D008234 ORTHO05D010422 6.1e-71 272.3 395 40.5
Potri.006G243000 Populus trichocarpa HOM05D008234 ORTHO05D010422 4.0e-70 269.6 403 38.7
Glyma.14G141400 Glycine max HOM05D008234 ORTHO05D010422 2.8e-68 263.5 383 37.3
FAN15G0125 Fragaria x ananassa HOM05D008234 ORTHO05D010422 7.0e-67 258.8 346 43.4
Oeu011264.1 Olea europaea HOM05D008234 ORTHO05D010422 1.2e-66 258.1 298 47.7
Thecc.03G110200 Theobroma cacao HOM05D008234 ORTHO05D010422 1.2e-66 258.1 384 38.5
EL10Ac2g04079 Beta vulgaris HOM05D008234 ORTHO05D010422 3.5e-66 256.5 404 39.4
ECA233G2242 Erigeron canadensis HOM05D008234 ORTHO05D010422 3.5e-66 256.5 292 44.5
Gohir.A03G071900 Gossypium hirsutum HOM05D008234 ORTHO05D010422 4.5e-66 256.1 322 42.5
Duzib068G0878 Durio zibethinus HOM05D008234 ORTHO05D010422 2.5e-64 250.4 395 38.2
HPP92_009609 Vanilla planifolia HOM05D008234 ORTHO05D010422 4.3e-64 249.6 364 38.7
Os03g0159700 Oryza sativa ssp. japonica HOM05D008234 ORTHO05D010422 1.2e-63 248.1 382 37.2
FvH4_2g36160 Fragaria vesca HOM05D008234 ORTHO05D010422 2.1e-63 247.3 345 41.7
Zm00001eb004480 Zea mays HOM05D008234 ORTHO05D010422 3.6e-63 246.5 393 35.4
Phvul.001G078800 Phaseolus vulgaris HOM05D008234 ORTHO05D010422 8.0e-63 245.4 390 37.2
COL.COLO4_28841 Corchorus olitorius HOM05D008234 ORTHO05D010422 6.8e-62 242.3 371 37.7
Psat6g034160 Pisum sativum HOM05D008234 ORTHO05D010422 1.5e-61 241.1 395 37.5
AUR62009335 Chenopodium quinoa HOM05D008234 ORTHO05D010422 5.4e-59 232.6 292 41.4
Cfa013340 Carpinus fangiana HOM05D001758 ORTHO05D005969 4.4e-53 213.0 326 36.8
ATR0697G092 Amborella trichopoda HOM05D008234 ORTHO05D010422 2.9e-52 210.3 416 32.7
Gorai.003G103400 Gossypium raimondii HOM05D008234 ORTHO05D001322 5.1e-49 199.5 287 39.0
Haze_21845 Corylus avellana HOM05D008234 ORTHO05D010422 3.6e-47 193.4 324 34.6
MELO3C003586.2 Cucumis melo HOM05D008234 ORTHO05D010422 6.4e-44 182.6 289 35.6
CsaV3_3G047390 Cucumis sativus L. HOM05D008234 ORTHO05D010422 7.1e-43 179.1 278 36.3
Gohir.D03G098600 Gossypium hirsutum HOM05D008234 ORTHO05D010422 2.5e-40 170.6 201 46.8
Nn2g11729 Nelumbo nucifera HOM05D008234 ORTHO05D010422 7.3e-40 169.1 388 30.2
Gohir.D03G098650 Gossypium hirsutum HOM05D008234 ORTHO05D010422 2.1e-39 167.5 136 61.0
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 8.1e-39 165.6 251 35.9
SEGI_11609 Sequoiadendron giganteum HOM05D008234 ORTHO05D010422 2.4e-30 137.5 264 32.6
Hma1.2p1_1434F.1_g283110 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 2.5e-11 74.3 82 36.6
arahy.Tifrunner.gnm1.ann1.CUF5YV Arachis hypogaea HOM05D002479 ORTHO05D002675 2.7e-10 70.9 320 22.8
MD00G1221000 Malus domestica HOM05D002244 ORTHO05D002269 2.8e-07 60.8 142 27.5
HanXRQChr03g0069631 Helianthus annuus HOM05D002646 ORTHO05D002782 6.2e-07 59.7 157 24.2
Sed0021692 Sechium edule HOM05D008234 ORTHO05D010422 8.2e-07 59.3 153 30.7
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 2.4e-06 57.8 100 35.0


User provided reference genes

Program Settings