Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold185G40105 Striga asiatica HOM05D000003 ORTHO05D000006 4.3e-91 337.8 152 100.0
SGA_v2.0_scaffold321G48586 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-57 226.9 147 71.4
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-47 192.6 208 44.7
SGA_v2.0_scaffold241G44224 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-46 189.5 202 43.1
SGA_v2.0_scaffold821G53642 Striga asiatica HOM05D000003 ORTHO05D000006 5.2e-44 181.4 203 42.4
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 6.7e-44 181.0 208 40.4
SGA_v2.0_scaffold272G46371 Striga asiatica HOM05D000003 ORTHO05D000006 8.8e-44 180.6 203 42.9
SGA_v2.0_scaffold301G47800 Striga asiatica HOM05D000003 ORTHO05D000006 1.5e-43 179.9 191 44.5
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 4.4e-43 178.3 201 40.8
SGA_v2.0_scaffold128G34102 Striga asiatica HOM05D000003 ORTHO05D000006 4.2e-38 161.8 190 41.1
SGA_v2.0_scaffold231G43458 Striga asiatica HOM05D000003 ORTHO05D000006 6.3e-34 147.9 188 39.9
SGA_v2.0_scaffold30G12507 Striga asiatica HOM05D011952 ORTHO05D000006 9.1e-33 144.1 173 41.6
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 3.2e-30 135.6 176 39.2
SGA_v2.0_scaffold83G26411 Striga asiatica HOM05D000003 ORTHO05D000006 4.0e-28 128.6 171 38.6
SGA_v2.0_scaffold134G34702 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-26 123.2 152 42.1
SGA_v2.0_scaffold185G40079 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-25 120.2 82 56.1
SGA_v2.0_scaffold18G08392 Striga asiatica HOM05D000003 ORTHO05D000006 9.1e-25 117.5 208 29.8
SGA_v2.0_scaffold29G12078 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-22 109.8 161 36.0
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 2.5e-22 109.4 207 28.0
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 1.2e-21 107.1 80 56.2
SGA_v2.0_scaffold104G30066 Striga asiatica HOM05D006612 ORTHO05D000006 2.8e-21 105.9 62 71.0
Cc04_g12750 Coffea canephora HOM05D000170 ORTHO05D000154 4.7e-21 105.1 204 29.4
SGA_v2.0_scaffold67G22780 Striga asiatica HOM05D000003 ORTHO05D000006 8.0e-21 104.4 193 28.5
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-20 103.2 171 33.3
SGA_v2.0_scaffold139G35393 Striga asiatica HOM05D000003 ORTHO05D000006 2.3e-20 102.8 207 28.0
SGA_v2.0_scaffold165G38197 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-20 101.3 199 27.1
SGA_v2.0_scaffold116G32202 Striga asiatica HOM05D000024 ORTHO05D000006 2.2e-18 96.3 198 27.8
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 4.9e-18 95.1 168 31.5
SGA_v2.0_scaffold221G42729 Striga asiatica HOM05D000003 ORTHO05D000006 2.4e-17 92.8 143 35.7
SGA_v2.0_scaffold242G44236 Striga asiatica HOM05D000003 ORTHO05D000004 4.5e-16 88.6 175 28.0
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 7.8e-16 87.8 177 30.5
SGA_v2.0_scaffold231G43427 Striga asiatica HOM05D018498 ORTHO05D000006 1.3e-15 87.0 93 40.9
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 1.7e-15 86.7 76 44.7
SGA_v2.0_scaffold61G21240 Striga asiatica HOM05D000003 ORTHO05D000006 1.7e-15 86.7 61 59.0
SGA_v2.0_scaffold74G24657 Striga asiatica HOM05D000003 ORTHO05D000006 6.6e-15 84.7 204 27.0
SGA_v2.0_scaffold83G26454 Striga asiatica HOM05D006612 ORTHO05D016790 6.6e-15 84.7 60 58.3
SGA_v2.0_scaffold6G03465 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-14 84.0 164 28.7
SGA_v2.0_scaffold9G04760 Striga asiatica HOM05D000003 ORTHO05D000006 4.3e-14 82.0 133 30.8
SGA_v2.0_scaffold47G17612 Striga asiatica HOM05D000003 ORTHO05D000006 9.5e-14 80.9 76 46.1
SGA_v2.0_scaffold99G29516 Striga asiatica HOM05D000003 ORTHO05D000006 2.1e-13 79.7 157 31.2
SGA_v2.0_scaffold57G20172 Striga asiatica HOM05D028223 ORTHO05D000006 4.7e-13 78.6 77 40.3
SGA_v2.0_scaffold14G07079 Striga asiatica HOM05D000003 ORTHO05D000006 1.0e-12 77.4 149 32.2
SGA_v2.0_scaffold16G07515 Striga asiatica HOM05D041003 ORTHO05D000006 1.4e-12 77.0 161 27.3
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-12 76.6 91 40.7
SGA_v2.0_scaffold2352G54103 Striga asiatica HOM05D011952 ORTHO05D000006 4.0e-12 75.5 57 56.1
SGA_v2.0_scaffold36G14428 Striga asiatica HOM05D024619 ORTHO05D017136 4.0e-12 75.5 80 42.5
SGA_v2.0_scaffold75G24875 Striga asiatica HOM05D011272 ORTHO05D010636 6.8e-12 74.7 74 45.9
SGA_v2.0_scaffold307G48055 Striga asiatica HOM05D011952 ORTHO05D000006 1.2e-11 73.9 57 56.1
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 3.4e-11 72.4 161 25.5
SGA_v2.0_scaffold34G13685 Striga asiatica HOM05D000003 ORTHO05D000006 3.4e-11 72.4 53 58.5
SGA_v2.0_scaffold451G51811 Striga asiatica HOM05D058879 ORTHO05D000006 3.4e-11 72.4 147 31.3
SGA_v2.0_scaffold47G17523 Striga asiatica HOM05D005949 ORTHO05D006945 9.8e-11 70.9 138 28.3
Rhsim01G0119200 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.3e-10 70.5 208 23.1
SGA_v2.0_scaffold59G20751 Striga asiatica HOM05D000003 ORTHO05D000006 1.7e-10 70.1 57 50.9
SGA_v2.0_scaffold19G08617 Striga asiatica HOM05D000003 ORTHO05D000006 2.9e-10 69.3 66 42.4
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-09 67.0 208 23.1
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-09 66.2 209 23.9
SGA_v2.0_scaffold200G41298 Striga asiatica HOM05D000003 ORTHO05D000006 4.1e-09 65.5 161 23.6
Dinv31302 Davidia involucrata HOM05D000003 ORTHO05D000006 5.4e-09 65.1 178 24.2
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.4e-09 65.1 208 23.1
SGA_v2.0_scaffold52G18930 Striga asiatica HOM05D035048 ORTHO05D012821 7.0e-09 64.7 99 32.3
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 7.0e-09 64.7 207 21.3
SGA_v2.0_scaffold61G21225 Striga asiatica HOM05D000003 ORTHO05D000006 9.2e-09 64.3 94 33.0
SGA_v2.0_scaffold76G25058 Striga asiatica HOM05D006612 ORTHO05D017136 2.7e-08 62.8 53 50.9
Rhsim01G0161700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.6e-08 62.0 208 24.5
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 7.8e-08 61.2 207 21.3
Dinv13289 Davidia involucrata HOM05D000003 ORTHO05D000006 7.8e-08 61.2 206 22.3
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.8e-08 61.2 209 23.0
Medtr2g078880 Medicago truncatula HOM05D000003 ORTHO05D000006 1.0e-07 60.8 125 28.0
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.0e-07 60.8 209 23.4
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-07 60.5 165 23.6
Aa31LG9G6670 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.7e-07 60.1 203 25.1
BraA01t04229Z Brassica rapa HOM05D000003 ORTHO05D000006 1.7e-07 60.1 99 31.3
Dinv38129 Davidia involucrata HOM05D000003 ORTHO05D000006 3.0e-07 59.3 208 21.6
SGA_v2.0_scaffold161G37849 Striga asiatica HOM05D025911 ORTHO05D000006 3.0e-07 59.3 114 28.1
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.0e-07 58.5 93 34.4
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.0e-07 58.5 208 21.2
SGA_v2.0_scaffold390G50610 Striga asiatica HOM05D030754 ORTHO05D000006 5.0e-07 58.5 151 27.2
Dinv11321 Davidia involucrata HOM05D000003 ORTHO05D000006 6.6e-07 58.2 171 23.4
SGA_v2.0_scaffold109G31166 Striga asiatica HOM05D011952 ORTHO05D000006 6.6e-07 58.2 61 42.6
Aa31sc248G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-07 57.8 194 21.1
Rhsim11G0006400 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.6e-07 57.8 149 26.8
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.6e-07 57.8 207 23.2
Aa31LG4G12660 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 114 32.5
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 93 33.3
Aqoxy5G01921 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-06 57.4 95 28.4
Dinv34373 Davidia involucrata HOM05D000003 ORTHO05D000006 1.1e-06 57.4 112 27.7
BcaB08g34387 Brassica carinata HOM05D000003 ORTHO05D000006 1.5e-06 57.0 100 31.0
BolC6t35401H Brassica oleracea HOM05D000496 ORTHO05D017591 1.5e-06 57.0 84 34.5
QL05p011536 Quercus lobata HOM05D000003 ORTHO05D000006 1.5e-06 57.0 126 27.8
Rhsim03G0095700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-06 56.6 171 23.4
SGA_v2.0_scaffold31G12850 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-06 56.6 120 30.8
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 2.5e-06 56.2 106 35.8
BraA06t25796Z Brassica rapa HOM05D000496 ORTHO05D011507 2.5e-06 56.2 77 35.1
BolC7t41849H Brassica oleracea HOM05D000003 ORTHO05D000006 3.3e-06 55.8 177 26.0
FvH4_6g23332 Fragaria vesca HOM05D000003 ORTHO05D000006 3.3e-06 55.8 129 25.6
Aa31sc380G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 192 23.4
CANSAT56G2946 Cannabis sativa HOM05D000003 ORTHO05D000006 5.6e-06 55.1 155 25.2
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 7.3e-06 54.7 71 33.8
Dinv43698 Davidia involucrata HOM05D000003 ORTHO05D000006 7.3e-06 54.7 208 21.6
SGA_v2.0_scaffold277G46679 Striga asiatica HOM05D006612 ORTHO05D000006 9.5e-06 54.3 34 55.9


User provided reference genes

Program Settings