Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 1.2e-158 563.1 297 100.0
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 1.7e-123 446.4 305 78.0
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 7.0e-122 441.0 286 81.5
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 4.3e-119 431.8 305 76.7
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 1.0e-112 410.6 305 74.4
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 3.9e-112 408.7 305 72.8
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 9.5e-111 404.1 305 72.5
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 1.6e-110 403.3 305 70.2
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 3.6e-110 402.1 305 70.2
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 4.7e-110 401.7 305 70.2
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 4.7e-110 401.7 305 70.2
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 6.2e-110 401.4 305 69.8
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 1.8e-109 399.8 296 72.6
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 1.8e-109 399.8 305 69.8
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 5.2e-109 398.3 296 72.0
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 6.8e-109 397.9 296 71.6
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 3.4e-108 395.6 305 69.5
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 5.8e-108 394.8 305 70.8
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 9.9e-108 394.0 292 73.3
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 1.7e-107 393.3 305 70.5
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 2.1e-105 386.3 295 70.5
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 1.0e-104 384.0 305 67.9
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 1.3e-104 383.6 305 68.5
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 3.0e-104 382.5 305 68.5
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 3.0e-104 382.5 305 68.2
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 3.9e-104 382.1 305 68.2
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 3.9e-104 382.1 305 68.2
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 5.1e-104 381.7 296 69.6
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 6.6e-104 381.3 296 69.6
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 1.9e-103 379.8 296 68.2
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 3.3e-103 379.0 296 68.6
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 3.3e-103 379.0 305 67.2
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 4.3e-103 378.6 305 66.9
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 4.3e-103 378.6 296 68.9
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 5.6e-103 378.3 296 69.3
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 7.3e-103 377.9 296 69.9
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 7.3e-103 377.9 294 70.1
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 7.3e-103 377.9 294 70.1
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 9.6e-103 377.5 295 69.8
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 2.1e-102 376.3 296 69.3
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 4.7e-102 375.2 294 68.7
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 4.7e-102 375.2 282 72.7
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 6.2e-102 374.8 296 67.6
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 8.1e-102 374.4 295 67.5
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 8.1e-102 374.4 295 67.5
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 1.1e-101 374.0 296 68.6
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 1.8e-101 373.2 293 67.9
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 1.8e-101 373.2 305 66.6
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 2.4e-101 372.9 305 66.9
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 2.4e-101 372.9 305 66.6
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 2.4e-101 372.9 296 68.2
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 6.9e-101 371.3 291 68.4
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 1.5e-100 370.2 302 65.2
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 2.0e-100 369.8 296 68.2
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 2.0e-100 369.8 296 67.2
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 3.4e-100 369.0 296 67.2
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 3.4e-100 369.0 296 68.2
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 4.4e-100 368.6 282 72.3
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 7.6e-100 367.9 296 67.6
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 9.9e-100 367.5 296 67.2
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 1.7e-99 366.7 305 67.2
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 2.2e-99 366.3 292 67.8
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 2.9e-99 365.9 305 64.3
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 4.9e-99 365.2 291 68.7
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 4.9e-99 365.2 301 64.8
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 4.9e-99 365.2 292 67.8
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 8.4e-99 364.4 293 66.9
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 1.1e-98 364.0 305 64.9
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.9e-98 363.2 294 67.0
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 2.4e-98 362.8 292 65.4
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 5.4e-98 361.7 291 66.7
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 5.4e-98 361.7 305 64.6
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 7.1e-98 361.3 294 66.7
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 9.3e-98 360.9 291 67.7
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 9.3e-98 360.9 292 65.4
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 1.2e-97 360.5 305 65.2
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 1.6e-97 360.1 292 64.4
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 2.1e-97 359.8 305 67.2
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 1.0e-96 357.5 292 65.1
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 1.7e-96 356.7 305 63.3
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 3.0e-96 355.9 299 66.6
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 6.6e-96 354.8 296 65.5
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 2.5e-95 352.8 292 65.4
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 9.6e-95 350.9 292 63.4
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 1.3e-94 350.5 292 64.0
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 1.3e-94 350.5 292 64.0
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 1.6e-94 350.1 291 63.9
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 3.6e-94 349.0 296 63.9
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 4.8e-94 348.6 292 63.7
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 8.1e-94 347.8 301 64.1
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 8.1e-94 347.8 301 63.5
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 1.8e-93 346.7 292 62.7
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 1.8e-93 346.7 306 61.8
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 2.6e-92 342.8 295 64.1
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 4.5e-92 342.0 292 62.7
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 5.8e-92 341.7 297 61.3
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 6.4e-91 338.2 292 61.6
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 9.3e-90 334.3 282 65.2
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 1.6e-89 333.6 292 63.7
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 6.7e-88 328.2 303 57.1
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 2.1e-86 323.2 274 66.4
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 4.8e-86 322.0 291 60.1
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.4e-85 320.5 282 63.5
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 3.1e-85 319.3 282 62.8
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 6.0e-81 305.1 296 58.4
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 1.1e-79 300.8 286 59.8
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 7.4e-71 271.6 315 48.3
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 2.3e-64 250.0 194 68.6
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 1.1e-63 247.7 288 51.0
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 2.0e-63 246.9 228 61.4
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 9.1e-61 238.0 286 49.7
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 3.4e-60 236.1 293 46.4
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.7e-57 226.5 196 64.8
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 8.5e-51 204.9 203 60.6
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 5.5e-50 202.2 153 68.6
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 3.0e-48 196.4 195 54.9
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 2.6e-47 193.4 334 40.4
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 1.8e-45 187.2 159 63.5
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 7.0e-45 185.3 143 68.5
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 1.6e-44 184.1 119 77.3
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 1.9e-42 177.2 291 42.6
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 5.3e-37 159.1 238 44.5
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 2.9e-35 153.3 164 50.0
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 4.2e-34 149.4 201 47.8
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 2.3e-32 143.7 97 75.3
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 1.3e-30 137.9 99 74.7
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 6.6e-27 125.6 186 43.5
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 8.0e-25 118.6 169 45.6
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 1.4e-24 117.9 115 59.1
Cre02.g109850 Chlamydomonas reinhardtii HOM05D005754 ORTHO05D006843 5.0e-19 99.4 283 30.4
CARHR278340 Cardamine hirsuta HOM05D005754 ORTHO05D006843 5.6e-18 95.9 86 58.1
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 3.1e-16 90.1 96 54.2
MCO15G034 Micromonas commoda HOM05D005754 ORTHO05D006843 8.9e-16 88.6 297 29.0
BcaC02g11579 Brassica carinata HOM05D005754 ORTHO05D006843 1.2e-15 88.2 60 66.7
Cfa024382 Carpinus fangiana HOM05D005754 ORTHO05D006843 1.2e-15 88.2 178 35.4
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 2.6e-15 87.0 51 78.4
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 5.8e-15 85.9 43 86.0
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 1.2e-12 78.2 115 47.0
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.9e-06 57.0 150 30.7


User provided reference genes

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