Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.5e-68 262.7 126 100.0
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 8.1e-35 150.6 100 67.0
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 8.1e-35 150.6 99 66.7
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 4.0e-34 148.3 96 69.8
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.2e-33 146.7 97 67.0
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 1.5e-33 146.4 95 69.5
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 2.0e-33 146.0 99 65.7
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 3.4e-33 145.2 97 66.0
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 7.6e-33 144.1 114 59.6
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 7.6e-33 144.1 98 64.3
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 7.6e-33 144.1 98 64.3
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 7.6e-33 144.1 98 64.3
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 9.9e-33 143.7 96 63.5
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.9e-33 143.7 96 63.5
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.9e-33 143.7 96 63.5
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 9.9e-33 143.7 94 68.1
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.3e-32 143.3 99 61.6
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 1.3e-32 143.3 98 64.3
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 2.2e-32 142.5 98 63.3
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 2.2e-32 142.5 104 57.7
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 2.2e-32 142.5 98 64.3
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 2.2e-32 142.5 94 68.1
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 2.9e-32 142.1 95 63.2
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 2.9e-32 142.1 94 68.1
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 2.9e-32 142.1 94 68.1
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 3.7e-32 141.7 99 61.6
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 3.7e-32 141.7 102 58.8
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 4.9e-32 141.4 104 56.7
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 4.9e-32 141.4 104 57.7
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 4.9e-32 141.4 99 62.6
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 6.4e-32 141.0 103 60.2
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 6.4e-32 141.0 98 63.3
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 8.4e-32 140.6 99 58.6
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 8.4e-32 140.6 98 66.3
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 1.1e-31 140.2 101 59.4
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-31 140.2 97 60.8
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 1.1e-31 140.2 97 63.9
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.1e-31 140.2 97 63.9
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.1e-31 140.2 88 70.5
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.9e-31 139.4 98 61.2
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 2.4e-31 139.0 98 61.2
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 3.2e-31 138.7 98 61.2
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 3.2e-31 138.7 98 61.2
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 4.1e-31 138.3 94 62.8
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 5.4e-31 137.9 99 56.6
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 9.2e-31 137.1 95 61.1
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.2e-30 136.7 102 57.8
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 1.6e-30 136.3 98 60.2
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.6e-30 136.3 103 56.3
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 2.1e-30 136.0 98 60.2
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.1e-30 136.0 100 59.0
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.1e-30 136.0 96 60.4
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 2.1e-30 136.0 98 61.2
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 2.7e-30 135.6 96 58.3
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 2.7e-30 135.6 97 57.7
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 3.5e-30 135.2 100 59.0
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.5e-30 135.2 96 58.3
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.6e-30 134.8 96 58.3
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 4.6e-30 134.8 96 57.3
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.0e-29 133.7 96 62.5
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 1.3e-29 133.3 98 59.2
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 1.7e-29 132.9 96 58.3
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.7e-29 132.9 95 63.2
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.7e-29 132.9 97 59.8
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 2.3e-29 132.5 99 54.5
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 2.3e-29 132.5 96 62.5
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 2.3e-29 132.5 88 64.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 3.9e-29 131.7 98 59.2
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 3.9e-29 131.7 102 51.0
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 3.9e-29 131.7 108 56.5
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 6.6e-29 131.0 98 58.2
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 8.6e-29 130.6 94 59.6
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 8.6e-29 130.6 99 51.5
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 8.6e-29 130.6 95 60.0
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 1.1e-28 130.2 96 59.4
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.1e-28 130.2 102 52.9
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.9e-28 129.4 93 58.1
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 2.5e-28 129.0 96 54.2
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 2.5e-28 129.0 96 56.2
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 5.6e-28 127.9 110 50.0
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.6e-27 126.3 96 54.2
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 4.7e-27 124.8 98 54.1
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 1.1e-26 123.6 96 53.1
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 1.8e-26 122.9 96 57.3
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 2.4e-26 122.5 96 57.3
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 5.2e-26 121.3 96 55.2
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.2e-25 120.2 96 54.2
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 1.2e-25 120.2 96 52.1
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 2.0e-25 119.4 96 50.0
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 2.6e-25 119.0 96 50.0
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 3.4e-25 118.6 85 58.8
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 4.4e-25 118.2 81 63.0
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.9e-24 115.5 85 56.5
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 8.4e-24 114.0 84 54.8
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 2.4e-23 112.5 97 54.6
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 4.2e-23 111.7 76 61.8
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 4.2e-23 111.7 96 52.1
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 1.2e-22 110.2 83 54.2
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 4.6e-22 108.2 106 47.2
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.7e-21 106.3 94 47.9
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.9e-16 89.0 90 45.6
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 4.2e-15 85.1 56 62.5
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 8.7e-13 77.4 53 60.4
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 3.3e-12 75.5 58 55.2
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 4.3e-12 75.1 89 40.4
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.1e-10 70.5 54 53.7
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 9.9e-09 63.9 39 69.2
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 4.9e-08 61.6 41 63.4
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.2e-06 57.0 40 55.0
CDE08G1612 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 2.7e-06 55.8 102 32.4


User provided reference genes

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