Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 0.0e+00 1176.0 611 100.0
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 5.7e-110 402.5 649 43.5
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 8.9e-87 325.5 650 36.6
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 2.4e-84 317.4 649 36.8
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 2.8e-80 303.9 636 36.0
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 1.4e-60 238.4 711 33.6
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 5.1e-58 229.9 663 33.5
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 1.5e-57 228.4 647 30.3
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 1.2e-54 218.8 697 29.3
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.4e-52 211.1 701 31.0
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 3.2e-52 210.7 754 31.0
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 1.2e-51 208.8 684 29.1
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 2.1e-51 208.0 716 30.0
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 1.0e-50 205.7 697 29.0
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 8.7e-50 202.6 693 31.7
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 1.5e-49 201.8 715 30.8
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 4.3e-49 200.3 707 28.9
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 7.3e-49 199.5 724 29.0
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 2.1e-48 198.0 701 28.7
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 2.8e-48 197.6 684 29.4
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 2.8e-48 197.6 653 28.9
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 3.6e-48 197.2 692 28.6
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 4.8e-48 196.8 725 30.6
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 1.8e-47 194.9 708 28.8
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 4.0e-47 193.7 703 28.4
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 1.2e-46 192.2 709 27.5
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 5.8e-46 189.9 679 30.0
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 2.4e-44 184.5 629 29.7
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 9.3e-44 182.6 645 30.2
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 2.7e-43 181.0 623 28.3
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 7.9e-43 179.5 735 25.9
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 1.1e-41 175.6 696 28.3
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 5.6e-41 173.3 628 28.2
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 7.4e-41 172.9 688 26.9
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 9.6e-41 172.6 741 26.3
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 8.1e-40 169.5 622 26.8
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 8.1e-40 169.5 622 27.3
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.1e-39 169.1 594 29.0
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 4.0e-39 167.2 471 31.2
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 6.9e-39 166.4 617 26.6
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.5e-38 165.2 619 27.3
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.0e-38 164.9 622 26.2
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 2.6e-38 164.5 695 28.1
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.5e-38 163.7 626 28.0
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.0e-37 162.5 702 26.8
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 2.9e-37 161.0 692 27.0
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 5.5e-36 156.8 766 26.9
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 8.7e-34 149.4 686 27.7
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 8.7e-34 149.4 675 28.1
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 4.3e-33 147.1 800 26.6
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 2.8e-32 144.4 270 36.3
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 8.2e-32 142.9 198 42.4
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 4.0e-31 140.6 808 25.1
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 7.1e-28 129.8 668 24.7
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 1.6e-27 128.6 758 27.2
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.5e-25 122.1 625 25.1
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.4e-23 115.5 531 26.4
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 7.4e-17 93.2 713 24.5
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 1.7e-16 92.0 698 23.6
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 3.1e-15 87.8 74 55.4
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 6.1e-11 73.6 54 59.3
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 5.7e-09 67.0 84 44.0
Oeu017707.1 Olea europaea HOM05D008222 ORTHO05D010364 6.3e-08 63.5 199 33.2


User provided reference genes

Program Settings