Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold184G39958 Striga asiatica HOM05D000531 ORTHO05D400770 2.1e-163 579.3 373 100.0
Gohir.D01G196300 Gossypium hirsutum HOM05D000531 ORTHO05D000877 2.0e-09 67.8 293 30.0
Gorai.002G240500 Gossypium raimondii HOM05D000531 ORTHO05D000877 2.0e-09 67.8 293 30.0
Duzib128G0513 Durio zibethinus HOM05D000531 ORTHO05D000877 3.5e-09 67.0 324 29.0
Gohir.A01G206900 Gossypium hirsutum HOM05D000531 ORTHO05D000877 4.5e-09 66.6 281 29.2
TWI77G0738 Tripterygium wilfordii HOM05D000531 ORTHO05D000877 5.9e-09 66.2 305 28.9
Gohir.D09G135600 Gossypium hirsutum HOM05D000531 ORTHO05D000877 1.3e-08 65.1 279 29.4
AUR62028537 Chenopodium quinoa HOM05D000531 ORTHO05D000877 2.3e-08 64.3 300 28.3
Gohir.A09G139000 Gossypium hirsutum HOM05D000531 ORTHO05D000877 2.3e-08 64.3 279 29.4
Nitab4.5_0021113g0010 Nicotiana tabacum HOM05D000531 ORTHO05D000877 5.0e-08 63.2 108 41.7
CAN.G397.17 Capsicum annuum HOM05D000531 ORTHO05D000877 1.1e-07 62.0 108 41.7
Gorai.006G155600 Gossypium raimondii HOM05D000531 ORTHO05D000877 3.3e-07 60.5 282 28.4
Prupe.7G112200 Prunus persica HOM05D000531 ORTHO05D000877 3.3e-07 60.5 111 44.1
EL10Ac7g16925 Beta vulgaris HOM05D000531 ORTHO05D000877 5.5e-07 59.7 244 37.3
FvH4_6g18510 Fragaria vesca HOM05D000531 ORTHO05D000877 7.2e-07 59.3 371 27.0
TPR.G19547 Trifolium pratense HOM05D000531 ORTHO05D000877 7.2e-07 59.3 112 41.1
FAN05G1269 Fragaria x ananassa HOM05D000531 ORTHO05D000877 9.5e-07 58.9 371 27.2
Solyc09g009490.4 Solanum lycopersicum HOM05D000531 ORTHO05D000877 9.5e-07 58.9 282 28.0
Carub.0004s1802 Capsella rubella HOM05D000531 ORTHO05D000877 1.2e-06 58.5 112 42.0
Cc06_g05680 Coffea canephora HOM05D000531 ORTHO05D000877 1.2e-06 58.5 293 27.6
Sopen09g004230 Solanum pennellii HOM05D000531 ORTHO05D000877 1.2e-06 58.5 282 28.0
Migut.L01774 Erythranthe guttata HOM05D000531 ORTHO05D000877 1.6e-06 58.2 107 39.3
Psat3g033680 Pisum sativum HOM05D000531 ORTHO05D000877 1.6e-06 58.2 111 40.5
QL07p039212 Quercus lobata HOM05D000531 ORTHO05D000877 2.1e-06 57.8 107 43.0
FAN05G0484 Fragaria x ananassa HOM05D000531 ORTHO05D000877 3.6e-06 57.0 371 27.2
Manes.08G024700 Manihot esculenta HOM05D000531 ORTHO05D000877 3.6e-06 57.0 280 27.5
TWI74G1017 Tripterygium wilfordii HOM05D000531 ORTHO05D000877 3.6e-06 57.0 278 34.9
CiPaw.10G009100 Carya illinoinensis HOM05D000531 ORTHO05D000877 4.7e-06 56.6 288 33.7
Medtr7g104480 Medicago truncatula HOM05D000531 ORTHO05D000877 4.7e-06 56.6 111 40.5
Lj1g0027512 Lotus japonicus HOM05D000531 ORTHO05D000877 6.1e-06 56.2 111 40.5
arahy.Tifrunner.gnm1.ann1.1A1ACU Arachis hypogaea HOM05D000531 ORTHO05D000877 8.0e-06 55.8 111 41.4
CARHR130540 Cardamine hirsuta HOM05D000531 ORTHO05D000877 8.0e-06 55.8 111 40.5
PGR004G2014 Punica granatum HOM05D000531 ORTHO05D000877 8.0e-06 55.8 307 27.7
Rhsim03G0076000 Rhododendron simsii HOM05D000531 ORTHO05D000877 8.0e-06 55.8 111 42.3


User provided reference genes

Program Settings