Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39796 Striga asiatica HOM05D017978 ORTHO05D010595 3.1e-243 844.7 430 100.0
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 3.5e-178 628.6 384 84.1
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 8.0e-143 511.1 388 69.1
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 7.4e-72 275.4 393 45.8
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 7.2e-43 179.1 275 39.6
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 5.9e-37 159.5 321 36.4
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 2.9e-36 157.1 398 32.7
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 3.8e-36 156.8 400 31.8
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 1.6e-34 151.4 382 33.5
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 1.5e-32 144.8 319 32.0
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 5.9e-29 132.9 306 32.7
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 7.8e-29 132.5 335 32.5
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 1.3e-28 131.7 315 34.3
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 1.1e-27 128.6 256 36.3
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 2.3e-25 120.9 270 35.6
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-25 120.6 257 33.1
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 2.4e-22 110.9 308 29.5
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 2.4e-22 110.9 270 32.6
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 8.6e-20 102.4 311 28.6
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 1.9e-19 101.3 248 29.4
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 2.5e-19 100.9 274 29.9
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 7.3e-19 99.4 276 33.0
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 1.2e-18 98.6 164 36.6
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 2.1e-18 97.8 277 31.0
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 2.1e-18 97.8 266 31.2
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 2.8e-18 97.4 252 30.6
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 4.0e-17 93.6 212 32.5
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 5.8e-16 89.7 246 27.6
SGA_v2.0_scaffold181G39785 Striga asiatica HOM05D017978 ORTHO05D010595 8.3e-15 85.9 128 45.3
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 3.5e-13 80.5 241 27.8
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 4.6e-13 80.1 241 27.4
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.0e-12 77.4 251 25.5
Cfa007611 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.6e-12 76.3 251 26.7
SGA_v2.0_scaffold25G11177 Striga asiatica HOM05D017978 ORTHO05D010595 6.6e-12 76.3 98 41.8
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 2.5e-11 74.3 264 25.8
Thecc.10G169400 Theobroma cacao HOM05D000007 ORTHO05D000039 5.6e-11 73.2 180 30.6
Duzib268G1877 Durio zibethinus HOM05D000007 ORTHO05D000039 7.3e-11 72.8 234 25.2
SGA_v2.0_scaffold130G34210 Striga asiatica HOM05D030202 ORTHO05D404626 7.3e-11 72.8 145 33.8
SGA_v2.0_scaffold130G34211 Striga asiatica HOM05D030202 ORTHO05D403157 7.3e-11 72.8 147 34.0
Gohir.D11G296400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.5e-11 72.4 244 25.0
Gorai.007G319500 Gossypium raimondii HOM05D000007 ORTHO05D000039 9.5e-11 72.4 244 25.0
FvH4_7g08973 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-10 72.0 247 25.1
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.6e-10 71.6 235 27.2
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.6e-10 71.6 253 27.7
Lsat_1_v5_gn_7_103821 Lactuca sativa HOM05D000007 ORTHO05D000039 2.1e-10 71.2 240 24.6
Thecc.10G169000 Theobroma cacao HOM05D000007 ORTHO05D000039 2.8e-10 70.9 180 29.4
QL08p064911 Quercus lobata HOM05D000007 ORTHO05D000017 4.7e-10 70.1 157 28.0
Gohir.A11G282760 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-09 68.9 253 24.5
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.1e-09 68.9 251 27.1
CANSAT56G3723 Cannabis sativa HOM05D000007 ORTHO05D000017 1.4e-09 68.6 180 26.1
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 1.4e-09 68.6 253 27.7
Gohir.A06G008600 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.4e-09 68.6 208 26.4
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-09 68.6 298 23.2
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.8e-09 68.2 250 26.4
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 2.3e-09 67.8 256 25.4
Haze_14522 Corylus avellana HOM05D000007 ORTHO05D000039 2.3e-09 67.8 237 26.2
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 2.3e-09 67.8 149 29.5
TWI34G1106 Tripterygium wilfordii HOM05D000007 ORTHO05D010595 4.0e-09 67.0 118 36.4
Cfa007561 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.2e-09 66.6 153 30.7
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.2e-09 66.6 254 28.0
SalBow6G4842 Salvia bowleyana HOM05D012950 ORTHO05D000017 8.9e-09 65.9 271 25.1
Cfa007562 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-08 65.5 258 25.2
AUR62017742 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.2e-08 65.5 248 26.2
AUR62031045 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.5e-08 65.1 245 26.9
FAN09G2562 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-08 65.1 262 24.8
FAN09G3937 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-08 65.1 262 24.8
Oeu041630.1 Olea europaea HOM05D000007 ORTHO05D000039 1.5e-08 65.1 176 27.8
Rhsim07G0186000 Rhododendron simsii HOM05D001942 ORTHO05D001996 1.5e-08 65.1 180 28.9
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-08 65.1 123 30.9
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 2.0e-08 64.7 245 26.1
FvH4_6g27880 Fragaria vesca HOM05D000007 ORTHO05D000039 2.0e-08 64.7 260 22.3
FAN14G0238 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-08 64.7 260 22.3
Thecc.10G168700 Theobroma cacao HOM05D000007 ORTHO05D000039 2.0e-08 64.7 122 32.8
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 2.0e-08 64.7 122 32.8
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-08 64.3 290 24.5
Aqoxy2G00678 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 3.4e-08 63.9 244 27.9
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 4.4e-08 63.5 253 24.9
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.8e-08 63.2 131 33.6
Gorai.010G008800 Gossypium raimondii HOM05D000007 ORTHO05D000017 5.8e-08 63.2 208 26.0
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 5.8e-08 63.2 108 37.0
RcHm_v2.0_Chr2g0131341 Rosa chinensis HOM05D000007 ORTHO05D000039 5.8e-08 63.2 261 24.5
Gohir.D06G004200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.6e-08 62.8 208 26.0
Ah.01g006770 Amaranthus hybridus HOM05D000007 ORTHO05D000039 9.9e-08 62.4 188 27.7
PSO478G5103 Papaver somniferum HOM05D000007 ORTHO05D000017 9.9e-08 62.4 163 26.4
Aqoxy3G03706 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 1.3e-07 62.0 196 26.0
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-07 62.0 153 29.4
Cfa007607 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.7e-07 61.6 250 24.0
COL.COLO4_35011 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.7e-07 61.6 227 25.1
Psat5g160200 Pisum sativum HOM05D000007 ORTHO05D000017 1.7e-07 61.6 174 26.4
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-07 61.6 252 24.6
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 2.2e-07 61.2 249 25.3
AUR62040420 Chenopodium quinoa HOM05D000007 ORTHO05D000039 2.2e-07 61.2 112 35.7
Prupe.3G110400 Prunus persica HOM05D000007 ORTHO05D000039 2.2e-07 61.2 108 36.1
THA.LOC104799786 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.2e-07 61.2 236 22.9
CAN.G475.39 Capsicum annuum HOM05D000007 ORTHO05D000039 2.9e-07 60.8 268 26.5
PGR042G2235 Punica granatum HOM05D000007 ORTHO05D000039 2.9e-07 60.8 125 35.2
PGR142G3580 Punica granatum HOM05D000007 ORTHO05D000017 2.9e-07 60.8 136 28.7
PSO017G6833 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-07 60.5 247 23.1
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 3.7e-07 60.5 120 29.2
AUR62032927 Chenopodium quinoa HOM05D000007 ORTHO05D000039 4.9e-07 60.1 251 25.5
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 4.9e-07 60.1 173 30.6
Nitab4.5_0002794g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.9e-07 60.1 294 23.8
Haze_02829 Corylus avellana HOM05D000007 ORTHO05D000039 6.4e-07 59.7 225 26.7
Potri.017G012200 Populus trichocarpa HOM05D000007 ORTHO05D000039 6.4e-07 59.7 203 25.1
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 6.4e-07 59.7 124 33.1
QL04p068200 Quercus lobata HOM05D000007 ORTHO05D000017 6.4e-07 59.7 227 25.1
SGA_v2.0_scaffold2492G54133 Striga asiatica HOM05D000007 ORTHO05D000039 6.4e-07 59.7 210 26.7
Aqoxy3G01080 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 8.4e-07 59.3 152 32.2
FAN21G1762 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.4e-07 59.3 112 25.0
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 8.4e-07 59.3 173 28.3
PSO832G4479 Papaver somniferum HOM05D000007 ORTHO05D000017 8.4e-07 59.3 162 28.4
Rhsim04G0080900 Rhododendron simsii HOM05D000007 ORTHO05D000039 8.4e-07 59.3 121 32.2
Rhsim01G0052200 Rhododendron simsii HOM05D001352 ORTHO05D001354 1.1e-06 58.9 132 30.3
Duzib147G0319 Durio zibethinus HOM05D000007 ORTHO05D000039 1.4e-06 58.5 132 28.8
Aqoxy1G02132 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 1.9e-06 58.2 127 30.7
Aqoxy3G01081 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 2.4e-06 57.8 93 38.7
Dinv29578 Davidia involucrata HOM05D000007 ORTHO05D005385 2.4e-06 57.8 165 27.9
Aqoxy3G03710 Aquilegia oxysepala HOM05D015266 ORTHO05D007631 3.2e-06 57.4 137 27.0
Cc04_g11930 Coffea canephora HOM05D000007 ORTHO05D000017 3.2e-06 57.4 132 31.8
Migut.M00201 Erythranthe guttata HOM05D000007 ORTHO05D000039 3.2e-06 57.4 125 32.8
FAN11G1320 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.2e-06 57.4 126 27.0
HanXRQChr10g0314831 Helianthus annuus HOM05D000007 ORTHO05D000039 3.2e-06 57.4 121 32.2
Medtr7g079640 Medicago truncatula HOM05D000007 ORTHO05D000039 3.2e-06 57.4 249 22.5
Prupe.3G013500 Prunus persica HOM05D000007 ORTHO05D000039 3.2e-06 57.4 119 31.1
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 3.2e-06 57.4 108 31.5
SalBow1G7714 Salvia bowleyana HOM05D012950 ORTHO05D005165 3.2e-06 57.4 134 30.6
ECA238G1204 Erigeron canadensis HOM05D000007 ORTHO05D000017 5.4e-06 56.6 259 23.9
Dinv31069 Davidia involucrata HOM05D000007 ORTHO05D000676 7.1e-06 56.2 113 36.3
Lalb_Chr20g0119831 Lupinus albus HOM05D000007 ORTHO05D000039 7.1e-06 56.2 122 30.3
RcHm_v2.0_Chr2g0154571 Rosa chinensis HOM05D000007 ORTHO05D000017 7.1e-06 56.2 119 29.4
Dinv38200 Davidia involucrata HOM05D000007 ORTHO05D000017 9.2e-06 55.8 100 38.0
Duzib147G0299 Durio zibethinus HOM05D000007 ORTHO05D000039 9.2e-06 55.8 126 25.4
Duzib147G1090 Durio zibethinus HOM05D000007 ORTHO05D000039 9.2e-06 55.8 126 25.4
FAN25G0241 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.2e-06 55.8 122 24.6
RcHm_v2.0_Chr2g0154521 Rosa chinensis HOM05D000007 ORTHO05D000017 9.2e-06 55.8 120 29.2
TWI31G1306 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.2e-06 55.8 155 29.7
TWI79G0220 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.2e-06 55.8 140 27.9


User provided reference genes

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