Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39767 Striga asiatica HOM05D006003 ORTHO05D007388 1.6e-186 656.0 331 100.0
Migut.M00692 Erythranthe guttata HOM05D006003 ORTHO05D007388 1.7e-129 466.5 322 73.3
MSTRG.6692 Avicennia marina HOM05D006003 ORTHO05D007388 3.9e-129 465.3 329 72.0
SalBow8G3868 Salvia bowleyana HOM05D006003 ORTHO05D007388 2.9e-116 422.5 325 68.6
CAN.G375.51 Capsicum annuum HOM05D006003 ORTHO05D007388 1.1e-112 410.6 325 63.1
Oeu059254.1 Olea europaea HOM05D006003 ORTHO05D007388 1.1e-112 410.6 283 72.1
Actinidia12605 Actinidia chinensis HOM05D006003 ORTHO05D007388 4.3e-112 408.7 326 64.7
vmacro11973 Vaccinium macrocarpon HOM05D006003 ORTHO05D007388 5.6e-112 408.3 325 64.3
Cc05_g10700 Coffea canephora HOM05D006003 ORTHO05D007388 1.1e-110 404.1 325 63.7
Dinv13362 Davidia involucrata HOM05D006003 ORTHO05D007388 1.5e-109 400.2 326 64.1
PGSC0003DMG400007060 Solanum tuberosum HOM05D006003 ORTHO05D007388 2.0e-109 399.8 325 62.8
Oeu005377.2 Olea europaea HOM05D006003 ORTHO05D007388 2.6e-109 399.4 280 70.7
Nitab4.5_0003230g0040 Nicotiana tabacum HOM05D006003 ORTHO05D007388 7.6e-109 397.9 325 61.2
Hma1.2p1_0050F.1_g028770 Hydrangea macrophylla HOM05D006003 ORTHO05D007388 1.7e-108 396.7 326 62.3
Sopen07g030420 Solanum pennellii HOM05D006003 ORTHO05D007388 2.5e-107 392.9 325 61.2
Solyc07g062150.3 Solanum lycopersicum HOM05D006003 ORTHO05D007388 3.2e-107 392.5 325 61.2
CSS0003385 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 5.5e-107 391.7 326 62.0
Peaxi162Scf00111g01321 Petunia axillaris HOM05D006003 ORTHO05D007388 9.3e-107 391.0 290 65.2
DCAR_019616 Daucus carota HOM05D006003 ORTHO05D007388 3.5e-106 389.0 327 60.9
CSS0022288 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 4.6e-106 388.7 326 61.7
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 1.3e-105 387.1 323 64.4
Prupe.4G156400 Prunus persica HOM05D006003 ORTHO05D007388 5.1e-105 385.2 323 58.8
Rhsim06G0211900 Rhododendron simsii HOM05D006003 ORTHO05D007388 5.1e-105 385.2 334 60.8
Nitab4.5_0000347g0030 Nicotiana tabacum HOM05D006003 ORTHO05D007388 1.5e-104 383.6 316 61.7
Prupe.4G156300 Prunus persica HOM05D006003 ORTHO05D007388 1.5e-104 383.6 323 59.4
CANSAT56G1876 Cannabis sativa HOM05D006003 ORTHO05D007388 4.3e-104 382.1 326 58.3
Atru.chr2.1938 Acer truncatum HOM05D006003 ORTHO05D007388 5.7e-104 381.7 326 60.4
AUR62019651 Chenopodium quinoa HOM05D006003 ORTHO05D007388 5.7e-104 381.7 331 57.1
Atru.chr2.1967 Acer truncatum HOM05D006003 ORTHO05D007388 8.2e-103 377.9 326 60.1
Eucgr.F03233 Eucalyptus grandis HOM05D006003 ORTHO05D007388 8.2e-103 377.9 325 58.5
MD11G1270000 Malus domestica HOM05D006003 ORTHO05D007388 8.2e-103 377.9 323 59.4
TAR626G1650 Trochodendron aralioides HOM05D006003 ORTHO05D007388 2.4e-102 376.3 326 57.7
PGR031G3165 Punica granatum HOM05D006003 ORTHO05D007388 3.1e-102 375.9 324 58.3
Gohir.A01G047600 Gossypium hirsutum HOM05D006003 ORTHO05D007388 2.0e-101 373.2 320 58.8
FvH4_3g17730 Fragaria vesca HOM05D006003 ORTHO05D007388 4.5e-101 372.1 323 57.9
FAN16G0946 Fragaria x ananassa HOM05D006003 ORTHO05D007388 4.5e-101 372.1 323 57.6
Gorai.002G047000 Gossypium raimondii HOM05D006003 ORTHO05D007388 5.9e-101 371.7 320 58.1
Sabra11G0081200 Salix brachista HOM05D006003 ORTHO05D007388 7.6e-101 371.3 320 58.8
TWI39G0770 Tripterygium wilfordii HOM05D006003 ORTHO05D007388 1.0e-100 370.9 325 58.2
Lj8A146G66 Lonicera japonica HOM05D006003 ORTHO05D007388 2.2e-100 369.8 311 61.1
Potri.011G104400 Populus trichocarpa HOM05D006003 ORTHO05D007388 2.2e-100 369.8 320 58.1
TAR624G1186 Trochodendron aralioides HOM05D006003 ORTHO05D007388 5.0e-100 368.6 365 52.9
HanXRQChr14g0439341 Helianthus annuus HOM05D006003 ORTHO05D007388 1.1e-99 367.5 325 58.5
Medtr2g073350 Medicago truncatula HOM05D006003 ORTHO05D007388 1.1e-99 367.5 324 57.7
MD11G1270100 Malus domestica HOM05D006003 ORTHO05D007388 1.9e-99 366.7 332 55.7
Lj1C824T4 Lonicera japonica HOM05D006003 ORTHO05D007388 2.5e-99 366.3 281 65.8
Ciclev10021233m.g Citrus clementina HOM05D006003 ORTHO05D007388 3.2e-99 365.9 325 58.5
Sabra11G0076500 Salix brachista HOM05D006003 ORTHO05D007388 1.2e-98 364.0 320 57.8
FAN25G0059 Fragaria x ananassa HOM05D006003 ORTHO05D007388 3.5e-98 362.5 338 54.7
Manes.15G098700 Manihot esculenta HOM05D006003 ORTHO05D007388 3.5e-98 362.5 320 57.8
Psat5g233200 Pisum sativum HOM05D006003 ORTHO05D007388 4.6e-98 362.1 324 56.8
GSVIVG01014095001 Vitis vinifera HOM05D006003 ORTHO05D007388 6.1e-98 361.7 329 58.1
Lj3g0000598 Lotus japonicus HOM05D006003 ORTHO05D007388 1.8e-97 360.1 321 57.6
Lj3g0003080 Lotus japonicus HOM05D006003 ORTHO05D007388 2.3e-97 359.8 321 57.3
Thecc.07G133000 Theobroma cacao HOM05D006003 ORTHO05D007388 3.0e-97 359.4 326 56.4
Ca_03928_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 3.9e-97 359.0 324 57.4
Ca_30126_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 3.9e-97 359.0 324 57.4
Ah.04g164020 Amaranthus hybridus HOM05D006003 ORTHO05D007388 1.1e-96 357.5 326 55.8
PGR083G1570 Punica granatum HOM05D006003 ORTHO05D007388 3.3e-96 355.9 326 56.4
EL10Ac4g08418 Beta vulgaris HOM05D006003 ORTHO05D007388 4.3e-96 355.5 326 54.6
Lalb_Chr20g0109151 Lupinus albus HOM05D006003 ORTHO05D007388 5.7e-96 355.1 326 56.4
HPP92_006378 Vanilla planifolia HOM05D006003 ORTHO05D007388 1.3e-95 354.0 317 57.4
Sc16g0007750 Simmondsia chinensis HOM05D006003 ORTHO05D007388 2.2e-95 353.2 281 60.5
Glyma.12G234000 Glycine max HOM05D006003 ORTHO05D007388 2.8e-95 352.8 323 54.8
FAN21G1616 Fragaria x ananassa HOM05D006003 ORTHO05D007388 3.7e-95 352.4 323 55.4
HanXRQChr13g0389731 Helianthus annuus HOM05D006003 ORTHO05D007388 2.4e-94 349.7 325 56.3
Glyma.13G264900 Glycine max HOM05D006003 ORTHO05D007388 3.1e-94 349.4 324 56.5
Sed0005123 Sechium edule HOM05D006003 ORTHO05D007388 6.9e-94 348.2 324 53.4
Gohir.D01G038300 Gossypium hirsutum HOM05D006003 ORTHO05D007388 9.0e-94 347.8 264 63.6
TPR.G12996 Trifolium pratense HOM05D006003 ORTHO05D007388 4.5e-93 345.5 275 60.4
PSO675G5422 Papaver somniferum HOM05D006003 ORTHO05D007388 7.7e-93 344.7 333 53.8
Cpa.g.sc77.63 Carica papaya HOM05D006003 ORTHO05D007388 1.3e-92 344.0 325 54.5
ECA240G1635 Erigeron canadensis HOM05D006003 ORTHO05D007388 1.3e-92 344.0 280 60.7
MELO3C016117.2 Cucumis melo HOM05D006003 ORTHO05D007388 3.8e-92 342.4 325 52.9
Eucgr.F01368 Eucalyptus grandis HOM05D006003 ORTHO05D007388 3.8e-92 342.4 329 53.8
ClCG07G010140 Citrullus lanatus HOM05D006003 ORTHO05D007388 7.2e-91 338.2 324 51.9
CsaV3_4G008190 Cucumis sativus L. HOM05D006003 ORTHO05D007388 7.2e-91 338.2 325 52.0
PSO541G5634 Papaver somniferum HOM05D006003 ORTHO05D007388 9.4e-91 337.8 327 53.5
Lsat_1_v5_gn_9_100380 Lactuca sativa HOM05D006003 ORTHO05D007388 3.6e-90 335.9 325 54.2
Os09g0345700 Oryza sativa ssp. japonica HOM05D006003 ORTHO05D007388 7.9e-90 334.7 327 52.6
THA.LOC104808088 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 8.8e-89 331.3 328 52.4
QL08p024148 Quercus lobata HOM05D006003 ORTHO05D007388 7.4e-88 328.2 326 52.8
Cfa019519 Carpinus fangiana HOM05D006003 ORTHO05D007388 9.1e-86 321.2 282 56.0
ATR0602G094 Amborella trichopoda HOM05D006003 ORTHO05D007388 1.2e-85 320.9 274 56.9
MD03G1247500 Malus domestica HOM05D006003 ORTHO05D007388 1.0e-84 317.8 289 57.1
Haze_09249 Corylus avellana HOM05D006003 ORTHO05D007388 1.3e-84 317.4 326 51.5
THA.LOC104813991 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 6.5e-84 315.1 332 50.0
AL2G38990 Arabidopsis lyrata HOM05D006003 ORTHO05D007388 6.1e-82 308.5 333 50.5
Thhalv10018897m.g Eutrema salsugineum HOM05D006003 ORTHO05D007388 1.0e-81 307.8 321 50.2
MBI06_g08515_MAGBIO Magnolia biondii HOM05D006003 ORTHO05D007388 1.8e-81 307.0 279 56.3
BcaC08g47430 Brassica carinata HOM05D006003 ORTHO05D007388 2.3e-81 306.6 321 50.8
arahy.Tifrunner.gnm1.ann1.U60PIC Arachis hypogaea HOM05D006003 ORTHO05D007388 3.0e-81 306.2 324 51.9
SHI27565 Sapria himalayana HOM05D006003 ORTHO05D007388 3.0e-81 306.2 249 60.2
CARHR072080 Cardamine hirsuta HOM05D006003 ORTHO05D007388 3.9e-81 305.8 322 50.3
A07p43860 Brassica napus HOM05D006003 ORTHO05D007388 2.6e-80 303.1 321 50.5
BraA07t31893Z Brassica rapa HOM05D006003 ORTHO05D007388 2.6e-80 303.1 321 50.5
Carub.0002s2544 Capsella rubella HOM05D006003 ORTHO05D007388 5.7e-80 302.0 333 49.5
Sc03g0010720 Simmondsia chinensis HOM05D006003 ORTHO05D007388 7.4e-80 301.6 291 55.7
Aa31LG4G2370 Aethionema arabicum HOM05D006003 ORTHO05D007388 2.8e-79 299.7 325 47.4
Sp5g33680 Schrenkiella parvula HOM05D006003 ORTHO05D007388 2.8e-79 299.7 321 49.5
BolC6t40268H Brassica oleracea HOM05D006003 ORTHO05D007388 4.8e-79 298.9 321 49.5
A02p22240 Brassica napus HOM05D006003 ORTHO05D007388 8.2e-79 298.1 321 49.5
C06p52490 Brassica napus HOM05D006003 ORTHO05D007388 1.1e-78 297.7 321 49.2
AT1G78590 Arabidopsis thaliana HOM05D006003 ORTHO05D007388 1.8e-78 297.0 333 48.6
BcaC03g15825 Brassica carinata HOM05D006003 ORTHO05D007388 2.4e-78 296.6 321 49.2
Duzib268G1415 Durio zibethinus HOM05D006003 ORTHO05D007388 3.1e-78 296.2 254 61.4
C02p35670 Brassica napus HOM05D006003 ORTHO05D007388 7.0e-78 295.0 321 48.9
BolC2t09587H Brassica oleracea HOM05D006003 ORTHO05D007388 7.0e-78 295.0 321 48.9
BraA02t07230Z Brassica rapa HOM05D006003 ORTHO05D007388 9.1e-78 294.7 321 49.2
BcaB05g25146 Brassica carinata HOM05D006003 ORTHO05D007388 2.6e-77 293.1 277 53.8
Dinv26706 Davidia involucrata HOM05D006003 ORTHO05D007388 3.8e-76 289.3 244 60.7
CDE04G1397 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 1.9e-75 287.0 272 55.5
COL.COLO4_17472 Corchorus olitorius HOM05D006003 ORTHO05D007388 9.4e-75 284.6 223 64.6
Nn6g34421 Nelumbo nucifera HOM05D006003 ORTHO05D007388 2.1e-74 283.5 254 57.9
Phvul.005G076600 Phaseolus vulgaris HOM05D006003 ORTHO05D007388 8.0e-74 281.6 221 62.4
Mapoly0214s0005 Marchantia polymorpha HOM05D006003 ORTHO05D007388 2.0e-72 276.9 324 46.6
SMO169G0094 Selaginella moellendorffii HOM05D006003 ORTHO05D007388 7.5e-72 275.0 276 50.4
CBR_g12698 Chara braunii HOM05D006003 ORTHO05D007388 9.7e-72 274.6 321 44.2
CDE10G0670 Ceratophyllum demersum HOM05D000595 ORTHO05D001274 3.7e-71 272.7 280 51.4
Pp3c14_23600 Physcomitrium patens HOM05D006003 ORTHO05D007388 6.3e-71 271.9 281 49.1
CiPaw.11G156000 Carya illinoinensis HOM05D006003 ORTHO05D007388 1.1e-67 261.2 260 55.4
Zm00001eb098430 Zea mays HOM05D006003 ORTHO05D007388 1.7e-55 220.7 199 56.3
SalBow7G3240 Salvia bowleyana HOM05D006003 ORTHO05D007388 8.0e-50 201.8 184 58.2
FAN11G1972 Fragaria x ananassa HOM05D006003 ORTHO05D007388 1.4e-46 191.0 191 51.8
MD03G1248900 Malus domestica HOM05D006003 ORTHO05D007388 1.3e-44 184.5 194 53.1
MCO14G555 Micromonas commoda HOM05D006003 ORTHO05D007388 1.3e-44 184.5 281 39.5
RcHm_v2.0_Chr5g0029501 Rosa chinensis HOM05D006003 ORTHO05D007388 1.3e-39 167.9 151 57.0
AUR62039577 Chenopodium quinoa HOM05D006003 ORTHO05D007388 4.0e-33 146.4 108 61.1
RcHm_v2.0_Chr5g0029511 Rosa chinensis HOM05D006003 ORTHO05D007388 2.1e-29 134.0 112 59.8
Psat5g275400 Pisum sativum HOM05D006003 ORTHO05D007388 1.4e-22 111.3 127 48.0
PRCOL_00004450 Prasinoderma coloniale HOM05D006003 ORTHO05D007388 1.9e-14 84.3 268 28.4
CDE03G0511 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 8.1e-10 68.9 138 36.2


User provided reference genes

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