Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 1.2e-112 409.8 207 100.0
SGA_v2.0_scaffold73G24417 Striga asiatica HOM05D010444 ORTHO05D010602 3.3e-33 146.0 110 70.9
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 9.2e-28 127.9 196 43.9
MBI15_g27554_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 2.1e-24 116.7 176 46.6
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 2.2e-21 106.7 125 51.2
Zm00001eb323950 Zea mays HOM05D010444 ORTHO05D010602 3.2e-20 102.8 189 41.8
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 2.1e-19 100.1 169 40.8
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 1.7e-18 97.1 173 42.2
Os06g0343500 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 1.6e-16 90.5 214 38.8
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 1.4e-15 87.4 138 42.8
Actinidia18858 Actinidia chinensis HOM05D010444 ORTHO05D010602 4.0e-15 85.9 110 47.3
HanXRQChr03g0091821 Helianthus annuus HOM05D010444 ORTHO05D010602 8.9e-15 84.7 60 66.7
Migut.J01735 Erythranthe guttata HOM05D015573 ORTHO05D010602 3.4e-14 82.8 189 38.1
SGA_v2.0_scaffold32G13151 Striga asiatica HOM05D000068 ORTHO05D008806 3.4e-14 82.8 149 38.9
SGA_v2.0_scaffold96G28940 Striga asiatica HOM05D015573 ORTHO05D017203 2.9e-13 79.7 175 34.9
A01p33230 Brassica napus HOM05D010444 ORTHO05D010602 2.4e-12 76.6 98 46.9
CiPaw.04G101700 Carya illinoinensis HOM05D011587 ORTHO05D010602 3.5e-11 72.8 154 35.7
Os04g0523812 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 1.0e-10 71.2 153 35.9
MBI05_g34728_MAGBIO Magnolia biondii HOM05D011587 ORTHO05D010602 3.9e-10 69.3 176 34.1
Os04g0523650 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 3.9e-10 69.3 145 36.6
SGA_v2.0_scaffold90G27610 Striga asiatica HOM05D010444 ORTHO05D010602 3.9e-10 69.3 114 42.1
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 1.5e-09 67.4 99 44.4
SGA_v2.0_scaffold413G51163 Striga asiatica HOM05D010444 ORTHO05D051413 2.5e-09 66.6 173 35.3
CiPaw.10G145000 Carya illinoinensis HOM05D011587 ORTHO05D010602 1.2e-08 64.3 180 32.2
SGA_v2.0_scaffold393G50704 Striga asiatica HOM05D010444 ORTHO05D010602 8.1e-08 61.6 102 40.2
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 1.8e-07 60.5 194 30.9
SGA_v2.0_scaffold73G24415 Striga asiatica HOM05D000100 ORTHO05D000052 1.2e-06 57.8 91 36.3
SGA_v2.0_scaffold127G34043 Striga asiatica HOM05D011891 ORTHO05D014146 2.0e-06 57.0 118 39.0


User provided reference genes

Program Settings