Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39713 Striga asiatica HOM05D004710 ORTHO05D005445 1.9e-257 892.1 497 100.0
SGA_v2.0_scaffold73G24477 Striga asiatica HOM05D004710 ORTHO05D005445 1.7e-176 623.2 490 73.5
MSTRG.14902 Avicennia marina HOM05D004710 ORTHO05D005445 5.4e-167 591.7 491 70.3
Migut.M00073 Erythranthe guttata HOM05D004710 ORTHO05D005445 5.4e-159 565.1 494 67.6
CSS0019642 Camellia sinensis var. sinensis HOM05D004710 ORTHO05D005445 2.0e-153 546.6 468 67.5
Cc05_g01390 Coffea canephora HOM05D004710 ORTHO05D005445 2.1e-150 536.6 493 65.3
GSVIVG01020835001 Vitis vinifera HOM05D004710 ORTHO05D005445 3.3e-148 529.3 485 64.7
Sopen05g017300 Solanum pennellii HOM05D004710 ORTHO05D005445 2.6e-145 519.6 494 63.2
CiPaw.04G137800 Carya illinoinensis HOM05D004710 ORTHO05D005445 2.2e-144 516.5 491 62.9
QL93p2016_0028 Quercus lobata HOM05D004710 ORTHO05D005445 6.4e-144 515.0 496 61.3
QL08p045042 Quercus lobata HOM05D004710 ORTHO05D005445 8.4e-144 514.6 485 62.1
CANSAT64G1857 Cannabis sativa HOM05D004710 ORTHO05D005445 4.3e-140 502.3 490 60.6
Prupe.3G177900 Prunus persica HOM05D004710 ORTHO05D005445 7.4e-140 501.5 491 61.3
Potri.002G057300 Populus trichocarpa HOM05D004710 ORTHO05D005445 2.1e-139 500.0 481 61.7
Cfa023545 Carpinus fangiana HOM05D004710 ORTHO05D005445 3.6e-139 499.2 490 60.4
Hma1.2p1_0073F.1_g038510 Hydrangea macrophylla HOM05D004710 ORTHO05D005445 3.6e-139 499.2 416 69.7
Potri.005G205300 Populus trichocarpa HOM05D004710 ORTHO05D005445 6.2e-139 498.4 479 61.4
TWI59G0681 Tripterygium wilfordii HOM05D004710 ORTHO05D005445 8.1e-139 498.0 486 61.1
Sabra02G0046700 Salix brachista HOM05D004710 ORTHO05D005445 1.8e-138 496.9 475 62.1
FvH4_6g38730 Fragaria vesca HOM05D004710 ORTHO05D005445 2.4e-138 496.5 491 60.7
AUR62015127 Chenopodium quinoa HOM05D004710 ORTHO05D005445 4.0e-138 495.7 443 64.1
arahy.Tifrunner.gnm1.ann1.3YJ1U6 Arachis hypogaea HOM05D004710 ORTHO05D005445 9.0e-138 494.6 491 60.7
Peaxi162Scf00416g00116 Petunia axillaris HOM05D004710 ORTHO05D005445 1.2e-137 494.2 487 61.8
arahy.Tifrunner.gnm1.ann1.BVM079 Arachis hypogaea HOM05D004710 ORTHO05D005445 2.6e-137 493.0 491 60.5
MELO3C016183.2 Cucumis melo HOM05D004710 ORTHO05D005445 2.6e-137 493.0 480 61.2
FAN14G4495 Fragaria x ananassa HOM05D004710 ORTHO05D005445 2.6e-137 493.0 500 59.6
RcHm_v2.0_Chr2g0152261 Rosa chinensis HOM05D004710 ORTHO05D005445 3.4e-137 492.7 488 63.5
Atru.chr6.2043 Acer truncatum HOM05D004710 ORTHO05D005445 4.5e-137 492.3 489 61.6
Rhsim12G0010700 Rhododendron simsii HOM05D004710 ORTHO05D005445 5.8e-137 491.9 493 60.4
FAN05G2509 Fragaria x ananassa HOM05D004710 ORTHO05D005445 7.6e-137 491.5 508 58.5
Glyma.02G284400 Glycine max HOM05D004710 ORTHO05D005445 7.6e-137 491.5 485 60.4
PGR042G2540 Punica granatum HOM05D004710 ORTHO05D005445 9.9e-137 491.1 473 63.0
DCAR_013324 Daucus carota HOM05D004710 ORTHO05D005445 1.3e-136 490.7 486 60.7
Ciclev10031314m.g Citrus clementina HOM05D004710 ORTHO05D005445 2.2e-136 490.0 485 61.0
TPR.G10151 Trifolium pratense HOM05D004710 ORTHO05D005445 2.2e-136 490.0 487 60.6
Psat2g017280 Pisum sativum HOM05D004710 ORTHO05D005445 6.4e-136 488.4 487 60.4
VMungo0647G1334 Vigna mungo HOM05D004710 ORTHO05D005445 6.4e-136 488.4 480 60.8
CsaV3_4G007580 Cucumis sativus L. HOM05D004710 ORTHO05D005445 8.4e-136 488.0 481 61.1
Aqoxy4G00042 Aquilegia oxysepala HOM05D004710 ORTHO05D005445 1.4e-135 487.3 485 60.4
FAN02G0505 Fragaria x ananassa HOM05D004710 ORTHO05D005445 1.9e-135 486.9 518 57.3
Glyma.14G030600 Glycine max HOM05D004710 ORTHO05D005445 2.4e-135 486.5 485 60.0
COL.COLO4_38396 Corchorus olitorius HOM05D004710 ORTHO05D005445 5.5e-135 485.3 483 61.1
FAN09G1050 Fragaria x ananassa HOM05D004710 ORTHO05D005445 5.5e-135 485.3 493 59.2
ClCG07G010740 Citrullus lanatus HOM05D004710 ORTHO05D005445 9.3e-135 484.6 481 60.7
Medtr5g091000 Medicago truncatula HOM05D004710 ORTHO05D005445 9.3e-135 484.6 493 59.6
Lalb_Chr10g0106551 Lupinus albus HOM05D004710 ORTHO05D005445 1.2e-134 484.2 483 60.0
Sc15g0002190 Simmondsia chinensis HOM05D004710 ORTHO05D005445 2.1e-134 483.4 484 59.9
Phvul.008G194500 Phaseolus vulgaris HOM05D004710 ORTHO05D005445 2.7e-134 483.0 484 59.7
TAR624G0695 Trochodendron aralioides HOM05D004710 ORTHO05D005445 3.5e-134 482.6 487 59.8
MD17G1134500 Malus domestica HOM05D004710 ORTHO05D005445 6.0e-134 481.9 487 59.8
Actinidia06121 Actinidia chinensis HOM05D004710 ORTHO05D005445 7.9e-134 481.5 413 67.3
Sabra05G0156000 Salix brachista HOM05D004710 ORTHO05D005445 3.0e-133 479.6 496 59.3
Nn7g38035 Nelumbo nucifera HOM05D004710 ORTHO05D005445 8.7e-133 478.0 486 58.8
Gohir.A08G051500 Gossypium hirsutum HOM05D004710 ORTHO05D005445 1.9e-132 476.9 484 60.5
Duzib211G0680 Durio zibethinus HOM05D004710 ORTHO05D005445 2.5e-132 476.5 477 61.0
MD09G1148200 Malus domestica HOM05D004710 ORTHO05D005445 2.5e-132 476.5 460 62.4
Sed0010176 Sechium edule HOM05D004710 ORTHO05D005445 4.3e-132 475.7 482 60.0
Eucgr.A02027 Eucalyptus grandis HOM05D004710 ORTHO05D005445 2.1e-131 473.4 480 59.0
vmacro08738 Vaccinium macrocarpon HOM05D004710 ORTHO05D005445 2.8e-131 473.0 493 58.8
Ah.01g013580 Amaranthus hybridus HOM05D004710 ORTHO05D005445 1.1e-130 471.1 432 62.5
Cpa.g.sc50.115 Carica papaya HOM05D004710 ORTHO05D005445 1.1e-130 471.1 489 59.3
Gohir.D08G061300 Gossypium hirsutum HOM05D004710 ORTHO05D005445 1.1e-130 471.1 484 59.9
Thecc.01G168300 Theobroma cacao HOM05D004710 ORTHO05D005445 2.4e-130 469.9 484 59.7
Actinidia11220 Actinidia chinensis HOM05D004710 ORTHO05D005445 3.1e-130 469.5 487 58.3
TAR625G1186 Trochodendron aralioides HOM05D004710 ORTHO05D005445 3.1e-130 469.5 485 58.8
Ca_06262_v3 Cicer arietinum L. HOM05D004710 ORTHO05D005445 4.0e-130 469.2 487 59.3
Gorai.004G063400 Gossypium raimondii HOM05D004710 ORTHO05D005445 5.3e-130 468.8 484 59.9
EL10Ac9g22830 Beta vulgaris HOM05D004710 ORTHO05D005445 1.5e-129 467.2 501 57.3
THA.LOC104800818 Tarenaya hassleriana HOM05D004710 ORTHO05D005445 2.6e-129 466.5 473 59.8
Duzib133G0803 Durio zibethinus HOM05D004710 ORTHO05D005445 1.0e-128 464.5 469 60.8
Sed0002024 Sechium edule HOM05D004710 ORTHO05D005445 1.0e-128 464.5 476 59.9
ECA246G2799 Erigeron canadensis HOM05D004710 ORTHO05D005445 2.2e-128 463.4 490 59.0
HanXRQChr06g0171641 Helianthus annuus HOM05D004710 ORTHO05D005445 4.9e-128 462.2 480 59.4
Aa31LG5G6040 Aethionema arabicum HOM05D004710 ORTHO05D005445 8.4e-128 461.5 501 56.9
Lalb_Chr04g0248931 Lupinus albus HOM05D004710 ORTHO05D005445 7.1e-127 458.4 479 59.3
HanXRQChr17g0541191 Helianthus annuus HOM05D004710 ORTHO05D005445 6.0e-126 455.3 471 59.2
PSO675G4395 Papaver somniferum HOM05D004710 ORTHO05D005445 7.9e-126 454.9 481 57.6
Nitab4.5_0003177g0030 Nicotiana tabacum HOM05D004710 ORTHO05D005445 1.3e-125 454.1 372 69.9
Hund08425 Selenicereus undatus HOM05D004710 ORTHO05D005445 1.3e-125 454.1 473 57.7
Thhalv10016548m.g Eutrema salsugineum HOM05D004710 ORTHO05D005445 1.8e-125 453.8 475 58.3
Sp4g13350 Schrenkiella parvula HOM05D004710 ORTHO05D005445 1.8e-125 453.8 475 58.5
Carub.0004s1208 Capsella rubella HOM05D004710 ORTHO05D005445 8.7e-125 451.4 480 58.1
PSO675G5558 Papaver somniferum HOM05D004710 ORTHO05D005445 8.7e-125 451.4 482 57.3
Gorai.001G211100 Gossypium raimondii HOM05D004710 ORTHO05D005445 3.3e-124 449.5 484 57.4
Lj6g0021308 Lotus japonicus HOM05D004710 ORTHO05D005445 7.4e-124 448.4 482 57.1
AT2G30880 Arabidopsis thaliana HOM05D004710 ORTHO05D005445 9.6e-124 448.0 476 58.2
A04p23580 Brassica napus HOM05D004710 ORTHO05D005445 2.1e-123 446.8 474 57.4
CARHR124360 Cardamine hirsuta HOM05D004710 ORTHO05D005445 2.1e-123 446.8 480 57.3
Gohir.A07G182700 Gossypium hirsutum HOM05D004710 ORTHO05D005445 2.8e-123 446.4 484 56.8
Lj6g0000252 Lotus japonicus HOM05D004710 ORTHO05D005445 4.8e-123 445.7 475 57.5
BcaB06g28390 Brassica carinata HOM05D004710 ORTHO05D005445 8.2e-123 444.9 478 57.1
Lsat_1_v5_gn_3_35160 Lactuca sativa HOM05D004710 ORTHO05D005445 8.2e-123 444.9 450 60.4
AL4G25830 Arabidopsis lyrata HOM05D004710 ORTHO05D005445 1.1e-122 444.5 475 57.7
HPP92_018652 Vanilla planifolia HOM05D004710 ORTHO05D005445 1.8e-122 443.7 490 55.9
Eucgr.K01227 Eucalyptus grandis HOM05D004710 ORTHO05D005445 2.4e-122 443.4 489 57.3
LjContig00049g0017244 Lotus japonicus HOM05D004710 ORTHO05D005445 1.5e-121 440.7 485 56.7
Os03g0666200 Oryza sativa ssp. japonica HOM05D004710 ORTHO05D005445 5.9e-121 438.7 476 56.3
Zm00001eb065510 Zea mays HOM05D004710 ORTHO05D005445 3.2e-119 433.0 492 54.3
ATR0763G198 Amborella trichopoda HOM05D004710 ORTHO05D005445 2.7e-118 429.9 491 54.6
BcaB06g28457 Brassica carinata HOM05D004710 ORTHO05D005445 3.6e-118 429.5 472 56.1
Nitab4.5_0000019g0200 Nicotiana tabacum HOM05D004710 ORTHO05D005445 1.3e-117 427.6 356 70.2
C04p60020 Brassica napus HOM05D004710 ORTHO05D005445 3.0e-117 426.4 472 55.9
BolC4t27504H Brassica oleracea HOM05D004710 ORTHO05D005445 3.0e-117 426.4 472 55.9
Solyc05g021100.2 Solanum lycopersicum HOM05D004710 ORTHO05D005445 5.1e-117 425.6 441 59.9
BraA04t17884Z Brassica rapa HOM05D004710 ORTHO05D005445 6.7e-117 425.2 474 55.7
Gohir.D07G189500 Gossypium hirsutum HOM05D004710 ORTHO05D005445 2.5e-116 423.3 456 58.1
MBI18_g07571_MAGBIO Magnolia biondii HOM05D004710 ORTHO05D005445 7.4e-116 421.8 436 58.9
Manes.01G130800 Manihot esculenta HOM05D004710 ORTHO05D005445 2.8e-115 419.9 435 58.9
Gohir.1Z049561 Gossypium hirsutum HOM05D004710 ORTHO05D005445 1.1e-106 391.3 353 64.3
Lj1C589T0 Lonicera japonica HOM05D004710 ORTHO05D005445 2.9e-104 383.3 525 50.5
CAN.G237.1 Capsicum annuum HOM05D004710 ORTHO05D005445 4.2e-103 379.4 376 62.0
Zm00001eb117740 Zea mays HOM05D004710 ORTHO05D005445 1.6e-97 360.9 467 48.6
PGR142G3117 Punica granatum HOM05D004710 ORTHO05D005445 4.2e-95 352.8 461 48.8
SEGI_28206 Sequoiadendron giganteum HOM05D004710 ORTHO05D005445 3.8e-88 329.7 400 50.2
BcaC01g06018 Brassica carinata HOM05D004710 ORTHO05D005445 4.0e-85 319.7 461 50.1
BcaB01g04076 Brassica carinata HOM05D004710 ORTHO05D005445 4.4e-84 316.2 469 47.5
Oeu040170.3 Olea europaea HOM05D004710 ORTHO05D005445 2.8e-83 313.5 370 55.9
Zm00001eb217790 Zea mays HOM05D004710 ORTHO05D005445 1.8e-82 310.8 359 54.3
C03p20350 Brassica napus HOM05D004710 ORTHO05D005445 1.1e-79 301.6 357 56.3
BolC3t14413H Brassica oleracea HOM05D004710 ORTHO05D005445 1.1e-79 301.6 357 56.3
Haze_13560 Corylus avellana HOM05D004710 ORTHO05D005445 8.0e-78 295.4 254 67.7
Dinv09874 Davidia involucrata HOM05D004710 ORTHO05D005445 2.3e-64 250.8 197 70.6
Pp3c23_16670 Physcomitrium patens HOM05D004710 ORTHO05D005445 1.4e-61 241.5 381 45.9
Mapoly0039s0099 Marchantia polymorpha HOM05D004710 ORTHO05D005445 6.4e-59 232.6 358 43.6
AUR62017588 Chenopodium quinoa HOM05D004710 ORTHO05D005445 2.7e-57 227.3 202 65.8
SMO169G0289 Selaginella moellendorffii HOM05D004710 ORTHO05D005445 6.0e-57 226.1 324 44.4
MBI18_g48251_MAGBIO Magnolia biondii HOM05D004710 ORTHO05D005445 6.6e-56 222.6 245 54.7
Aa31LG1G7230 Aethionema arabicum HOM05D004710 ORTHO05D005445 4.3e-55 219.9 196 64.8
AagrBONN_evm.TU.Sc2ySwM_228.2862 Anthoceros agrestis HOM05D004710 ORTHO05D005445 8.1e-54 215.7 419 38.9
FAN06G4649 Fragaria x ananassa HOM05D004710 ORTHO05D005445 1.4e-45 188.3 209 56.5
FAN18G0865 Fragaria x ananassa HOM05D004710 ORTHO05D005445 1.7e-43 181.4 147 66.7
Pp3c13_22640 Physcomitrium patens HOM05D004710 ORTHO05D005445 3.2e-42 177.2 416 36.5
FAN08G2380 Fragaria x ananassa HOM05D004710 ORTHO05D005445 2.7e-33 147.5 82 86.6
Pp3c26_520 Physcomitrium patens HOM05D004710 ORTHO05D005445 6.0e-33 146.4 348 33.6
Haze_13559 Corylus avellana HOM05D004710 ORTHO05D005445 7.8e-33 146.0 79 88.6
CBR_g48423 Chara braunii HOM05D004710 ORTHO05D005445 1.5e-31 141.7 411 30.4
HPP92_018658 Vanilla planifolia HOM05D004710 ORTHO05D005445 3.1e-29 134.0 77 83.1
Os07g0138100 Oryza sativa ssp. japonica HOM05D004710 ORTHO05D005445 4.2e-26 123.6 81 67.9
A03p17240 Brassica napus HOM05D004710 ORTHO05D005445 4.6e-25 120.2 250 40.4
Dinv09873 Davidia involucrata HOM05D004710 ORTHO05D005445 1.2e-20 105.5 132 49.2
SHI10530 Sapria himalayana HOM05D000906 ORTHO05D000713 8.7e-16 89.4 79 64.6
BraA03t10997Z Brassica rapa HOM05D004710 ORTHO05D005445 1.1e-10 72.4 60 68.3
BraA03t10998Z Brassica rapa HOM05D004710 ORTHO05D005445 2.3e-08 64.7 97 42.3
Solyc05g150127.1 Solanum lycopersicum HOM05D004710 ORTHO05D005445 6.7e-08 63.2 37 86.5
Aa31LG1G7240 Aethionema arabicum HOM05D004710 ORTHO05D005445 8.7e-08 62.8 151 33.8
MBI18_g29058_MAGBIO Magnolia biondii HOM05D004710 ORTHO05D005445 1.5e-07 62.0 144 35.4
AUR62017587 Chenopodium quinoa HOM05D004710 ORTHO05D005445 1.3e-06 58.9 101 37.6
Lj1A589T9 Lonicera japonica HOM05D004710 ORTHO05D005445 3.7e-06 57.4 35 82.9


User provided reference genes

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