Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 0.0e+00 2474.9 1284 100.0
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 0.0e+00 1111.3 1333 52.1
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 2.5e-280 969.5 1174 50.8
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 5.6e-224 782.3 1396 40.2
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.0e-161 575.5 1380 35.1
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.1e-154 551.2 1369 34.8
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 1.0e-145 522.3 1404 32.1
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 8.8e-145 519.2 1403 32.1
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 1.0e-137 495.7 1367 33.7
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 3.0e-137 494.2 1353 32.1
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.2e-136 492.3 1324 33.2
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 5.7e-136 490.0 1463 31.6
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 8.3e-135 486.1 1429 32.3
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.8e-134 485.0 1320 33.1
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 3.1e-134 484.2 1414 32.3
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 7.0e-134 483.0 1439 32.2
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 1.6e-133 481.9 1522 31.9
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 2.1e-130 471.5 965 37.2
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 6.1e-130 469.9 1532 31.3
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 1.5e-128 465.3 1458 31.3
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 2.8e-127 461.1 1349 31.4
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 3.1e-126 457.6 1372 32.0
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 3.8e-124 450.7 1401 32.3
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 2.8e-122 444.5 1374 31.5
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 4.0e-121 440.7 1408 31.2
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 8.9e-121 439.5 1337 30.0
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 3.4e-120 437.6 1408 31.0
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 2.0e-117 428.3 1473 31.3
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 8.6e-116 422.9 1217 31.2
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 8.0e-114 416.4 1425 30.0
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.4e-113 415.6 1422 29.0
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 3.1e-113 414.5 1495 29.2
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 1.2e-112 412.5 1360 29.6
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 7.8e-109 399.8 1469 30.0
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 3.9e-108 397.5 1424 29.2
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 6.6e-108 396.7 1378 29.8
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 1.1e-107 396.0 1442 29.1
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 7.3e-107 393.3 1399 30.7
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 7.5e-104 383.3 1392 29.5
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 7.5e-104 383.3 1350 29.5
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.7e-103 382.1 1390 29.2
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 6.4e-103 380.2 1412 29.5
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 6.6e-100 370.2 1426 29.6
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 1.9e-99 368.6 1371 30.1
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 4.3e-99 367.5 1321 29.9
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 4.3e-99 367.5 1424 28.8
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.6e-98 365.5 1386 29.1
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 8.1e-98 363.2 1442 28.2
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 8.9e-97 359.8 1384 29.5
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 2.6e-96 358.2 1329 28.6
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 5.8e-96 357.1 1266 29.6
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 1.7e-95 355.5 1306 28.3
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 2.2e-95 355.1 1428 28.9
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 2.2e-95 355.1 1391 28.0
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 3.8e-95 354.4 1406 27.1
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 3.2e-94 351.3 1398 28.0
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 1.1e-91 342.8 1309 28.0
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 1.1e-91 342.8 1312 27.8
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 1.1e-91 342.8 1309 28.0
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 5.6e-91 340.5 1370 28.4
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 2.0e-88 332.0 1310 27.7
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 1.7e-87 328.9 1329 27.5
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 2.9e-87 328.2 1314 27.9
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 2.9e-87 328.2 1306 27.9
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 2.4e-86 325.1 1300 27.8
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 7.1e-86 323.6 1343 27.5
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 1.3e-84 319.3 1320 27.5
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 7.3e-83 313.5 1339 28.2
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 1.3e-82 312.8 1336 26.2
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 1.8e-81 308.9 1319 27.8
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 2.6e-80 305.1 1223 28.8
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 3.4e-80 304.7 1377 27.7
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.4e-80 304.7 1340 27.3
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.4e-80 304.7 1340 27.3
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.3e-79 302.8 1439 27.3
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.6e-77 295.8 516 38.0
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 2.3e-76 292.0 510 37.8
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 1.5e-75 289.3 1225 27.4
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 4.3e-75 287.7 1409 26.1
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 5.6e-75 287.3 387 46.3
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 7.4e-75 287.0 1324 26.2
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 2.6e-72 278.5 1108 28.2
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 7.6e-72 276.9 1314 27.5
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 8.4e-71 273.5 1440 26.0
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 5.5e-70 270.8 1389 27.3
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 9.6e-67 260.0 1604 24.4
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 9.6e-67 260.0 1566 24.7
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.1e-65 256.5 1299 25.9
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 2.6e-64 251.9 1287 25.6
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 2.2e-63 248.8 493 32.0
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 3.8e-63 248.1 1477 25.0
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.9e-62 245.7 521 34.4
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 5.5e-62 244.2 462 37.4
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 2.3e-60 238.8 1354 25.3
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 2.5e-59 235.3 516 33.9
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 2.5e-59 235.3 507 33.3
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 3.7e-58 231.5 552 32.6
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 3.1e-57 228.4 1302 25.0
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 1.5e-56 226.1 1291 26.2
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 5.0e-55 221.1 559 30.6
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 7.2e-54 217.2 1376 23.5
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 6.1e-53 214.2 315 42.9
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 3.1e-49 201.8 292 43.2
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 6.9e-49 200.7 515 30.5
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.3e-47 196.4 283 48.8
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 7.2e-46 190.7 1347 22.6
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 1.2e-45 189.9 363 36.1
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 3.7e-42 178.3 309 38.2
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 9.4e-38 163.7 185 51.4
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 3.6e-37 161.8 567 27.0
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 2.8e-34 152.1 1283 21.7
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 5.3e-33 147.9 145 52.4
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 5.5e-30 137.9 246 42.3
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 4.0e-28 131.7 300 36.0
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 1.2e-27 130.2 126 53.2
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 4.4e-27 128.3 267 39.3
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 5.5e-22 111.3 123 52.0
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 4.7e-21 108.2 278 35.6
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 2.3e-20 105.9 253 34.0
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 9.8e-19 100.5 382 29.6
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 3.1e-17 95.5 253 35.2
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 3.1e-17 95.5 133 42.1
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 4.1e-17 95.1 95 47.4
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 5.9e-16 91.3 142 34.5
Actinidia12355 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.5e-14 85.9 485 26.6
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 4.9e-10 71.6 115 37.4
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 1.8e-09 69.7 121 33.1
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 7.0e-09 67.8 264 25.4
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 3.5e-08 65.5 85 51.8
SEGI_11604 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 2.3e-07 62.8 111 32.4
MD09G1132400 Malus domestica HOM05D005171 ORTHO05D006343 2.9e-07 62.4 161 32.3
SEGI_14020 Sequoiadendron giganteum HOM05D005171 ORTHO05D026698 7.3e-06 57.8 260 26.5


User provided reference genes

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